Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1735

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
2,046,416	-		Pf6N2E2_1733	0.77	+0.1
2,046,503	+		Pf6N2E2_1733	0.82	-0.4
2,046,503	+		Pf6N2E2_1733	0.82	-0.9
2,046,504	-		Pf6N2E2_1733	0.82	-0.8
2,046,504	-		Pf6N2E2_1733	0.82	-0.4
2,046,504	-		Pf6N2E2_1733	0.82	+0.2
2,046,504	-		Pf6N2E2_1733	0.82	-0.6
2,046,505	+		Pf6N2E2_1733	0.82	+0.4
2,046,505	+		Pf6N2E2_1733	0.82	-0.7
2,046,505	+		Pf6N2E2_1733	0.82	-0.2
2,046,506	-		Pf6N2E2_1733	0.82	-0.5
2,046,506	-		Pf6N2E2_1733	0.82	-0.4
2,046,506	-		Pf6N2E2_1733	0.82	+2.6
2,046,506	-		Pf6N2E2_1733	0.82	-0.2
2,046,506	-		Pf6N2E2_1733	0.82	+0.5
2,046,506	-		Pf6N2E2_1733	0.82	-0.8
2,046,506	-		Pf6N2E2_1733	0.82	-0.2
2,046,576	-		Pf6N2E2_1733	0.86	-0.4
2,046,671	+				+0.6
2,046,671	+				-1.2
2,046,671	+				+0.4
2,046,671	+				-0.7
2,046,672	-				+0.5
2,046,672	-				-0.6
2,046,672	-				-0.0
2,046,672	-				-1.0
2,046,672	-				-0.7
2,046,703	+				+1.6
2,046,704	-				-0.2
2,046,704	-				+0.6
2,046,923	+				-0.5
2,046,923	+				-1.6
2,046,924	-				-0.6
2,046,987	-				-0.5
2,047,083	-		Pf6N2E2_1734	0.24	+0.4
2,047,083	-		Pf6N2E2_1734	0.24	+0.1
2,047,083	-		Pf6N2E2_1734	0.24	-1.2
2,047,083	-		Pf6N2E2_1734	0.24	+0.8
2,047,324	+		Pf6N2E2_1734	0.83	+0.4
2,047,332	+		Pf6N2E2_1734	0.85	-0.4
2,047,333	-		Pf6N2E2_1734	0.85	+0.3
2,047,333	-		Pf6N2E2_1734	0.85	+0.0
2,047,335	-		Pf6N2E2_1734	0.86	+0.5
2,047,335	-		Pf6N2E2_1734	0.86	+0.1
2,047,360	-				+3.2
2,047,377	-				+1.6
2,047,395	+				-0.2
2,047,396	-				+0.2
2,047,437	+				+0.3
2,047,753	+		Pf6N2E2_1735	0.79	-1.8
2,047,754	-		Pf6N2E2_1735	0.79	-0.9
2,047,754	-		Pf6N2E2_1735	0.79	-1.0
2,047,898	+				+0.0
2,047,939	+				+0.7
2,047,945	+				+0.8
2,047,946	-				-1.2
2,047,946	-				-0.1
2,048,022	+				+1.0
2,048,022	+				-0.2
2,048,023	-				-2.1
2,048,099	-				-1.0
2,048,139	-				+0.0
2,048,250	+				-1.5
2,048,250	+				-0.4
2,048,251	-				-0.1
2,048,265	+				-0.8
2,048,266	-				+1.0
2,048,266	-				-0.7
2,048,266	-				+0.0
2,048,267	+				-1.3
2,048,268	-				-0.2
2,048,268	-				-0.2
2,048,376	+		Pf6N2E2_1736	0.17	+0.1
2,048,464	+		Pf6N2E2_1736	0.24	+0.4
2,048,464	+		Pf6N2E2_1736	0.24	+0.3
2,048,464	+		Pf6N2E2_1736	0.24	-0.0
2,048,464	+		Pf6N2E2_1736	0.24	+0.0
2,048,475	+		Pf6N2E2_1736	0.24	-0.9
2,048,475	+		Pf6N2E2_1736	0.24	+1.2
2,048,475	+		Pf6N2E2_1736	0.24	-0.6
2,048,475	+		Pf6N2E2_1736	0.24	+1.6
2,048,475	+		Pf6N2E2_1736	0.24	+0.2
2,048,476	-		Pf6N2E2_1736	0.25	+0.0
2,048,553	+		Pf6N2E2_1736	0.31	+1.6
2,048,554	-		Pf6N2E2_1736	0.31	+0.1
2,048,589	+		Pf6N2E2_1736	0.34	-0.3