Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1377

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
1,613,197	+				+1.6
1,613,197	+				-0.0
1,613,252	+				-0.7
1,613,252	+				+0.8
1,613,531	+		Pf6N2E2_1376	0.39	+0.4
1,613,531	+		Pf6N2E2_1376	0.39	+0.2
1,613,532	-		Pf6N2E2_1376	0.39	+0.6
1,613,532	-		Pf6N2E2_1376	0.39	-1.1
1,613,535	-		Pf6N2E2_1376	0.39	-1.4
1,613,535	-		Pf6N2E2_1376	0.39	-0.5
1,613,590	-		Pf6N2E2_1376	0.46	-0.2
1,613,854	+		Pf6N2E2_1376	0.77	-0.3
1,614,023	-				+2.6
1,614,023	-				+0.1
1,614,145	+				-1.9
1,614,146	-				-0.9
1,614,289	+				-1.0
1,614,611	-		Pf6N2E2_1377	0.27	-0.3
1,614,611	-		Pf6N2E2_1377	0.27	+0.1
1,614,611	-		Pf6N2E2_1377	0.27	-1.3
1,614,668	-		Pf6N2E2_1377	0.30	-0.4
1,614,752	-		Pf6N2E2_1377	0.36	-0.0
1,615,079	-		Pf6N2E2_1377	0.55	+0.4
1,615,168	+		Pf6N2E2_1377	0.61	-0.3
1,615,169	-		Pf6N2E2_1377	0.61	-0.5
1,615,415	+		Pf6N2E2_1377	0.76	+0.8
1,615,518	-		Pf6N2E2_1377	0.82	+0.6
1,615,549	+		Pf6N2E2_1377	0.84	+1.0
1,615,549	+		Pf6N2E2_1377	0.84	+1.6
1,615,818	-				+0.5
1,615,928	-				+1.0
1,615,928	-				+0.1
1,615,942	+				-0.1
1,615,942	+				+1.6
1,615,942	+				-0.7
1,615,942	+				+0.7
1,615,942	+				-0.5
1,615,943	-				+1.6
1,615,959	+				-0.1
1,615,959	+				+0.5
1,615,959	+				-0.1
1,615,959	+				-0.4
1,615,959	+				-0.0
1,615,959	+				+0.1
1,615,960	-				+0.6
1,615,960	-				-0.3
1,615,960	-				+0.2
1,615,960	-				-0.4
1,615,960	-				-1.1
1,615,960	-				-1.3
1,615,961	+				+0.3
1,615,961	+				-0.3
1,615,962	-				-0.6
1,615,985	+				-0.2
1,615,986	-				+0.2
1,615,986	-				+0.5
1,616,077	+				-0.1
1,616,077	+				+0.6
1,616,077	+				-0.5
1,616,077	+				+1.6
1,616,077	+				+0.2
1,616,078	-				-1.4
1,616,078	-				+0.5
1,616,078	-				-0.6
1,616,078	-				+0.7
1,616,081	+				+0.5
1,616,154	-				-0.0
1,616,203	+				+0.9
1,616,203	+				+0.2
1,616,204	-				-0.8
1,616,204	-				+0.1
1,616,311	-				-1.0
1,616,329	+		Pf6N2E2_1378	0.11	+1.6
1,616,330	-		Pf6N2E2_1378	0.11	+0.8
1,616,330	-		Pf6N2E2_1378	0.11	+0.4
1,616,330	-		Pf6N2E2_1378	0.11	-0.2
1,616,330	-		Pf6N2E2_1378	0.11	-0.4
1,616,334	-		Pf6N2E2_1378	0.12	-0.7
1,616,371	+		Pf6N2E2_1378	0.15	-0.3
1,616,389	+		Pf6N2E2_1378	0.16	+2.2
1,616,405	-		Pf6N2E2_1378	0.18	-0.3
1,616,428	+		Pf6N2E2_1378	0.20	-0.7
1,616,429	-		Pf6N2E2_1378	0.20	+0.2
1,616,497	-		Pf6N2E2_1378	0.25	-1.2
1,616,764	+		Pf6N2E2_1378	0.48	-0.0
1,616,764	+		Pf6N2E2_1378	0.48	-0.0
1,616,765	-		Pf6N2E2_1378	0.48	-0.7
1,616,765	-		Pf6N2E2_1378	0.48	-0.1