Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1115

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
1,308,155	+		Pf6N2E2_1114	0.66	-0.0
1,308,184	-		Pf6N2E2_1114	0.67	+0.4
1,308,262	-		Pf6N2E2_1114	0.70	-0.4
1,308,270	+		Pf6N2E2_1114	0.70	-0.8
1,308,271	-		Pf6N2E2_1114	0.70	+0.8
1,308,271	-		Pf6N2E2_1114	0.70	+1.6
1,308,483	+		Pf6N2E2_1114	0.78	-0.9
1,308,684	+		Pf6N2E2_1114	0.86	-0.2
1,308,708	+		Pf6N2E2_1114	0.87	-1.7
1,308,708	+		Pf6N2E2_1114	0.87	+0.7
1,308,708	+		Pf6N2E2_1114	0.87	+1.2
1,308,709	-		Pf6N2E2_1114	0.87	-1.8
1,308,709	-		Pf6N2E2_1114	0.87	-0.1
1,308,778	-				+0.3
1,308,778	-				+0.1
1,309,058	-				-0.2
1,309,058	-				+1.3
1,309,178	+		Pf6N2E2_1115	0.37	-0.1
1,309,179	-		Pf6N2E2_1115	0.37	-0.2
1,309,179	-		Pf6N2E2_1115	0.37	-0.3
1,309,208	+		Pf6N2E2_1115	0.45	-0.2
1,309,208	+		Pf6N2E2_1115	0.45	+0.1
1,309,307	+		Pf6N2E2_1115	0.71	+0.7
1,309,308	-		Pf6N2E2_1115	0.71	-0.3
1,309,308	-		Pf6N2E2_1115	0.71	+0.5
1,309,308	-		Pf6N2E2_1115	0.71	+0.7
1,309,308	-		Pf6N2E2_1115	0.71	+0.4
1,309,542	+				+3.6
1,309,543	-				-0.0
1,309,543	-				+0.3
1,309,549	+				-1.2
1,309,550	-				+0.6
1,309,566	-				-0.0
1,309,746	-		Pf6N2E2_1116	0.40	+0.4
1,309,804	+		Pf6N2E2_1116	0.53	+0.2
1,309,805	-		Pf6N2E2_1116	0.53	-0.1
1,309,994	+				+0.6
1,309,994	+				+0.1
1,309,994	+				-0.0
1,309,995	-				-0.4
1,309,995	-				+0.1
1,309,995	-				+1.1
1,309,995	-				-0.7
1,309,995	-				+1.6
1,309,995	-				-0.0
1,310,066	-				-2.0
1,310,066	-				+0.8
1,310,066	-				+0.3
1,310,066	-				-0.7