Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30185

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
6,713,472	+				+0.8
6,713,472	+				+2.8
6,713,472	+				+0.8
6,713,472	+				+1.4
6,713,472	+				-0.4
6,713,472	+				-0.6
6,713,473	-				-0.9
6,713,473	-				-2.0
6,713,473	-				-0.4
6,713,473	-				-0.5
6,713,473	-				-1.0
6,713,473	-				-1.5
6,713,473	-				-0.8
6,713,473	-				-2.8
6,713,473	-				-2.2
6,713,473	-				-1.0
6,713,473	-				+1.6
6,713,473	-				-0.8
6,713,482	+				+3.7
6,713,482	+				+0.1
6,713,483	-				-0.6
6,713,493	-				-1.2
6,713,493	-				-0.4
6,713,543	+				-1.9
6,713,551	-				+1.7
6,713,563	+				+1.5
6,713,564	-				+2.7
6,713,564	-				+1.7
6,713,564	-				-0.4
6,713,583	-				+0.4
6,713,583	-				-2.3
6,713,638	+				-1.9
6,713,694	+				-2.2
6,713,694	+				-2.3
6,713,695	-				-2.1
6,713,737	-				-1.4
6,713,737	-				-1.4
6,713,803	+				-1.8
6,713,832	+				-0.1
6,713,832	+				-1.7
6,713,833	-				+0.1
6,713,833	-				+0.4
6,713,833	-				-1.6
6,713,833	-				-0.2
6,713,833	-				+0.9
6,713,897	+				-0.5
6,713,897	+				-0.4
6,713,897	+				-2.1
6,713,897	+				-1.2
6,713,897	+				+3.8
6,713,897	+				-0.8
6,713,897	+				+1.3
6,713,897	+				+0.7
6,713,897	+				+1.6
6,713,897	+				+0.5
6,713,897	+				-1.5
6,713,897	+				+1.9
6,713,898	-				+0.1
6,713,898	-				-1.6
6,713,898	-				+1.5
6,713,898	-				-0.9
6,713,898	-				+0.4
6,713,898	-				-0.9
6,713,898	-				-2.8
6,713,898	-				+0.1
6,713,898	-				+0.8
6,713,898	-				+2.0
6,713,898	-				+1.1
6,713,898	-				-2.3
6,713,898	-				-0.8
6,713,898	-				-1.3
6,713,898	-				-1.3
6,713,898	-				-1.8
6,713,898	-				-1.3
6,713,922	+				+1.6
6,713,922	+				-0.4
6,713,923	-				+0.4
6,713,925	+				-0.6
6,713,926	-				-1.6
6,713,926	-				+1.3
6,713,928	+				+1.4
6,713,936	-				-0.2
6,713,961	+				-1.7
6,713,961	+				+0.1
6,713,961	+				+0.7
6,713,961	+				-1.3
6,713,961	+				+0.3
6,713,961	+				+0.4
6,713,961	+				+1.0
6,713,961	+				-0.6
6,713,961	+				+1.2
6,713,961	+				+2.4
6,713,961	+				+1.7
6,713,961	+				+2.4
6,713,961	+				-1.2
6,713,961	+				+0.2
6,713,961	+				+1.2
6,713,962	-				-2.1
6,713,962	-				-1.4
6,713,962	-				-1.7
6,713,962	-				+1.8
6,713,962	-				-1.5
6,713,962	-				-1.4
6,713,962	-				+0.9
6,714,001	+				+1.1
6,714,001	+				-0.1
6,714,001	+				+0.6
6,714,001	+				+2.0
6,714,001	+				-0.0
6,714,001	+				+0.7
6,714,001	+				+0.7
6,714,001	+				+1.2
6,714,001	+				-1.3
6,714,001	+				+1.4
6,714,002	-				-0.6
6,714,002	-				-0.4
6,714,002	-				-2.4
6,714,002	-				-1.0
6,714,002	-				-2.3
6,714,002	-				+1.8
6,714,002	-				-0.2
6,714,002	-				-2.0
6,714,042	+		PFLU_RS30180	0.16	-3.1
6,714,042	+		PFLU_RS30180	0.16	+0.1
6,714,042	+		PFLU_RS30180	0.16	-1.4
6,714,042	+		PFLU_RS30180	0.16	-1.2
6,714,043	-		PFLU_RS30180	0.16	-2.4
6,714,043	-		PFLU_RS30180	0.16	-2.2
6,714,043	-		PFLU_RS30180	0.16	+0.9
6,714,043	-		PFLU_RS30180	0.16	+1.3
6,714,043	-		PFLU_RS30180	0.16	-0.8
6,714,043	-		PFLU_RS30180	0.16	-1.6
6,714,043	-		PFLU_RS30180	0.16	-0.6
6,714,084	+		PFLU_RS30180	0.24	+2.2
6,714,084	+		PFLU_RS30180	0.24	-0.6
6,714,084	+		PFLU_RS30180	0.24	+1.0
6,714,084	+		PFLU_RS30180	0.24	-0.4
6,714,084	+		PFLU_RS30180	0.24	-0.2
6,714,085	-		PFLU_RS30180	0.24	+0.6
6,714,085	-		PFLU_RS30180	0.24	+1.1
6,714,142	+		PFLU_RS30180	0.36	+1.5
6,714,142	+		PFLU_RS30180	0.36	-0.6
6,714,143	-		PFLU_RS30180	0.36	-2.3
6,714,143	-		PFLU_RS30180	0.36	+0.4
6,714,143	-		PFLU_RS30180	0.36	-0.8
6,714,143	-		PFLU_RS30180	0.36	-1.4
6,714,143	-		PFLU_RS30180	0.36	-0.8
6,714,208	+		PFLU_RS30180	0.49	-1.2
6,714,208	+		PFLU_RS30180	0.49	+1.1
6,714,208	+		PFLU_RS30180	0.49	-1.9
6,714,208	+		PFLU_RS30180	0.49	+0.2
6,714,208	+		PFLU_RS30180	0.49	-1.5
6,714,208	+		PFLU_RS30180	0.49	-1.8
6,714,208	+		PFLU_RS30180	0.49	-1.0
6,714,208	+		PFLU_RS30180	0.49	-0.3
6,714,208	+		PFLU_RS30180	0.49	+1.4
6,714,208	+		PFLU_RS30180	0.49	+0.1
6,714,208	+		PFLU_RS30180	0.49	+1.7
6,714,208	+		PFLU_RS30180	0.49	-1.5
6,714,209	-		PFLU_RS30180	0.49	-0.9
6,714,209	-		PFLU_RS30180	0.49	-1.0
6,714,209	-		PFLU_RS30180	0.49	-1.9
6,714,209	-		PFLU_RS30180	0.49	-2.0
6,714,209	-		PFLU_RS30180	0.49	+2.1
6,714,209	-		PFLU_RS30180	0.49	-0.2
6,714,209	-		PFLU_RS30180	0.49	+1.1
6,714,209	-		PFLU_RS30180	0.49	-1.0
6,714,209	-		PFLU_RS30180	0.49	+1.4
6,714,261	+		PFLU_RS30180	0.59	-0.6
6,714,261	+		PFLU_RS30180	0.59	-1.8
6,714,261	+		PFLU_RS30180	0.59	+1.1
6,714,367	+		PFLU_RS30180	0.80	+1.0
6,714,367	+		PFLU_RS30180	0.80	-1.2
6,714,367	+		PFLU_RS30180	0.80	-1.5
6,714,367	+		PFLU_RS30180	0.80	+0.2
6,714,367	+		PFLU_RS30180	0.80	-0.8
6,714,367	+		PFLU_RS30180	0.80	+1.1
6,714,367	+		PFLU_RS30180	0.80	+0.1
6,714,367	+		PFLU_RS30180	0.80	+0.2
6,714,367	+		PFLU_RS30180	0.80	-2.4
6,714,368	-		PFLU_RS30180	0.80	-1.9
6,714,368	-		PFLU_RS30180	0.80	+1.4
6,714,368	-		PFLU_RS30180	0.80	-1.4
6,714,368	-		PFLU_RS30180	0.80	-0.4
6,714,420	+				-1.4
6,714,420	+				-1.2
6,714,420	+				+0.8
6,714,420	+				+0.7
6,714,420	+				+0.8
6,714,420	+				-1.0
6,714,420	+				+0.2
6,714,421	-				-0.6
6,714,421	-				-0.8
6,714,421	-				+1.6
6,714,421	-				+2.7
6,714,421	-				-1.8
6,714,421	-				-1.8
6,714,421	-				-2.3
6,714,421	-				-1.4
6,714,421	-				+2.6
6,714,421	-				+0.1
6,714,421	-				+0.8
6,714,421	-				+0.4
6,714,421	-				+0.5
6,714,421	-				-0.4
6,714,466	+				-2.0
6,714,466	+				-0.2
6,714,466	+				+2.4
6,714,466	+				+2.3
6,714,466	+				+0.8
6,714,467	-				+0.5
6,714,467	-				+0.1
6,714,467	-				-1.9
6,714,467	-				-2.5
6,714,467	-				+0.1
6,714,467	-				-0.2
6,714,513	+				-2.9
6,714,513	+				-1.0
6,714,513	+				-0.3
6,714,513	+				-1.3
6,714,513	+				+0.1
6,714,513	+				+2.4
6,714,513	+				-0.4
6,714,513	+				+0.1
6,714,513	+				-0.3
6,714,514	-				-2.6
6,714,514	-				+1.3
6,714,514	-				+0.2
6,714,514	-				+1.2
6,714,514	-				-0.2
6,714,514	-				-0.4
6,714,514	-				+2.3
6,714,514	-				-0.4
6,714,514	-				-2.0
6,714,514	-				+1.5
6,714,514	-				-1.0
6,714,514	-				+1.6
6,714,514	-				+0.2
6,714,733	-		PFLU_RS30185	0.28	+0.3
6,714,775	+		PFLU_RS30185	0.32	-0.9
6,714,775	+		PFLU_RS30185	0.32	-1.9
6,714,776	-		PFLU_RS30185	0.33	+0.9
6,714,776	-		PFLU_RS30185	0.33	-1.0
6,714,776	-		PFLU_RS30185	0.33	-3.2
6,714,776	-		PFLU_RS30185	0.33	+0.9
6,714,776	-		PFLU_RS30185	0.33	-0.3
6,714,776	-		PFLU_RS30185	0.33	+1.0
6,714,857	+		PFLU_RS30185	0.41	-0.4
6,714,874	+		PFLU_RS30185	0.43	-0.9
6,714,874	+		PFLU_RS30185	0.43	+0.0
6,714,875	-		PFLU_RS30185	0.43	-1.0
6,714,919	+		PFLU_RS30185	0.48	+2.1
6,714,919	+		PFLU_RS30185	0.48	-2.0
6,714,919	+		PFLU_RS30185	0.48	-3.1
6,714,919	+		PFLU_RS30185	0.48	-0.2
6,714,919	+		PFLU_RS30185	0.48	-2.9
6,714,919	+		PFLU_RS30185	0.48	+1.2
6,714,919	+		PFLU_RS30185	0.48	-0.6
6,714,919	+		PFLU_RS30185	0.48	+2.1
6,714,919	+		PFLU_RS30185	0.48	+0.1
6,714,919	+		PFLU_RS30185	0.48	-0.9
6,714,920	-		PFLU_RS30185	0.48	-2.0
6,714,920	-		PFLU_RS30185	0.48	-0.2
6,714,920	-		PFLU_RS30185	0.48	-0.3
6,714,920	-		PFLU_RS30185	0.48	-2.5
6,714,920	-		PFLU_RS30185	0.48	+4.2
6,714,920	-		PFLU_RS30185	0.48	-0.8
6,714,920	-		PFLU_RS30185	0.48	+0.4
6,714,920	-		PFLU_RS30185	0.48	+0.8
6,714,920	-		PFLU_RS30185	0.48	-1.2
6,714,920	-		PFLU_RS30185	0.48	+0.8
6,714,920	-		PFLU_RS30185	0.48	-0.6
6,714,920	-		PFLU_RS30185	0.48	-1.8
6,714,920	-		PFLU_RS30185	0.48	-1.2
6,714,920	-		PFLU_RS30185	0.48	-2.9
6,714,920	-		PFLU_RS30185	0.48	-2.2
6,714,920	-		PFLU_RS30185	0.48	-2.4
6,714,923	+		PFLU_RS30185	0.48	+1.1
6,714,924	-		PFLU_RS30185	0.48	+0.1
6,714,924	-		PFLU_RS30185	0.48	+2.2
6,714,924	-		PFLU_RS30185	0.48	-1.2
6,714,960	+		PFLU_RS30185	0.52	-2.0
6,714,960	+		PFLU_RS30185	0.52	-0.4
6,714,960	+		PFLU_RS30185	0.52	-0.8
6,714,961	-		PFLU_RS30185	0.52	-1.3
6,714,961	-		PFLU_RS30185	0.52	+0.5
6,714,961	-		PFLU_RS30185	0.52	-2.1
6,714,961	-		PFLU_RS30185	0.52	-2.3
6,715,056	-		PFLU_RS30185	0.62	-1.3
6,715,067	-		PFLU_RS30185	0.63	+0.9
6,715,148	+		PFLU_RS30185	0.72	+1.6
6,715,201	+		PFLU_RS30185	0.78	-0.8
6,715,202	-		PFLU_RS30185	0.78	+0.2
6,715,371	+				-0.9
6,715,371	+				+1.8
6,715,371	+				-1.0
6,715,371	+				-0.4
6,715,371	+				-0.3
6,715,371	+				-1.6
6,715,371	+				+2.0
6,715,371	+				-1.4
6,715,371	+				-0.8
6,715,371	+				+1.7
6,715,371	+				-2.2
6,715,371	+				-0.9
6,715,371	+				-2.3
6,715,371	+				+0.8
6,715,372	-				+0.8
6,715,372	-				-0.3
6,715,372	-				-0.8
6,715,372	-				-1.2
6,715,372	-				-1.3
6,715,372	-				+1.4
6,715,372	-				+1.8
6,715,372	-				-0.6
6,715,372	-				+0.9
6,715,372	-				-2.0
6,715,372	-				+0.4
6,715,372	-				-0.4
6,715,372	-				-1.7
6,715,372	-				+0.6
6,715,372	-				+0.7
6,715,372	-				-1.2
6,715,439	+				-1.5
6,715,465	+				-0.6
6,715,466	-				-0.4
6,715,466	-				+0.6
6,715,471	+				-0.2
6,715,471	+				-2.8
6,715,471	+				-1.3
6,715,471	+				+1.4
6,715,471	+				-1.6
6,715,471	+				-0.6
6,715,471	+				+1.2
6,715,472	-				-1.6
6,715,472	-				-0.6
6,715,472	-				-0.2
6,715,472	-				-1.9
6,715,472	-				-1.2
6,715,496	+				-0.6
6,715,497	-				-0.2
6,715,497	-				-2.5
6,715,504	+				-0.4
6,715,504	+				+2.3
6,715,504	+				-1.9
6,715,504	+				-1.9
6,715,504	+				-0.4
6,715,504	+				-2.6
6,715,504	+				+1.0
6,715,504	+				-0.5
6,715,504	+				-1.3
6,715,504	+				+0.8
6,715,505	-				-1.7
6,715,505	-				+2.0
6,715,505	-				+0.6
6,715,505	-				-1.7
6,715,505	-				+0.8
6,715,505	-				+0.3
6,715,505	-				-2.6
6,715,505	-				+0.1
6,715,505	-				+2.7
6,715,505	-				-1.2
6,715,505	-				-0.2
6,715,505	-				-0.7
6,715,505	-				+0.7
6,715,505	-				-2.0
6,715,541	+				-2.5
6,715,541	+				-1.0
6,715,542	-				+0.2
6,715,549	+				+0.4
6,715,549	+				-1.5
6,715,549	+				+1.1
6,715,550	-				-1.0
6,715,550	-				-0.1
6,715,550	-				-0.6
6,715,550	-				+1.5
6,715,550	-				+1.8
6,715,550	-				+1.9
6,715,599	+				+2.4
6,715,637	+				+0.7
6,715,637	+				+0.7
6,715,637	+				-1.6
6,715,637	+				-1.3
6,715,637	+				+0.4
6,715,637	+				-1.6
6,715,638	-				-1.5
6,715,638	-				-1.9
6,715,638	-				+2.0
6,715,638	-				+0.6
6,715,638	-				+1.4
6,715,638	-				+2.3
6,715,638	-				-1.6
6,715,638	-				+1.4
6,715,638	-				-1.5
6,715,760	+		PFLU_RS30190	0.10	+3.3
6,715,760	+		PFLU_RS30190	0.10	-0.5
6,715,806	+		PFLU_RS30190	0.12	-1.6
6,715,806	+		PFLU_RS30190	0.12	-3.1
6,715,806	+		PFLU_RS30190	0.12	+2.2
6,715,806	+		PFLU_RS30190	0.12	-1.0
6,715,807	-		PFLU_RS30190	0.12	+1.3
6,715,807	-		PFLU_RS30190	0.12	+0.4
6,715,835	+		PFLU_RS30190	0.14	+0.4
6,715,835	+		PFLU_RS30190	0.14	+0.3
6,715,835	+		PFLU_RS30190	0.14	-0.3
6,715,835	+		PFLU_RS30190	0.14	-0.4
6,715,835	+		PFLU_RS30190	0.14	+3.8
6,715,835	+		PFLU_RS30190	0.14	-0.6
6,715,835	+		PFLU_RS30190	0.14	-1.0
6,715,835	+		PFLU_RS30190	0.14	-1.2
6,715,835	+		PFLU_RS30190	0.14	-2.2
6,715,835	+		PFLU_RS30190	0.14	+2.1
6,715,835	+		PFLU_RS30190	0.14	+1.3
6,715,835	+		PFLU_RS30190	0.14	-0.8
6,715,836	-		PFLU_RS30190	0.14	-0.7
6,715,836	-		PFLU_RS30190	0.14	-0.9
6,715,836	-		PFLU_RS30190	0.14	-0.6
6,715,836	-		PFLU_RS30190	0.14	+0.2
6,715,836	-		PFLU_RS30190	0.14	+1.9
6,715,836	-		PFLU_RS30190	0.14	-0.6
6,715,836	-		PFLU_RS30190	0.14	-0.4
6,715,836	-		PFLU_RS30190	0.14	-0.6
6,715,836	-		PFLU_RS30190	0.14	+0.8
6,715,836	-		PFLU_RS30190	0.14	+0.2
6,715,836	-		PFLU_RS30190	0.14	+0.6
6,715,836	-		PFLU_RS30190	0.14	-1.0
6,715,836	-		PFLU_RS30190	0.14	+1.5
6,715,836	-		PFLU_RS30190	0.14	-1.8
6,715,895	+		PFLU_RS30190	0.16	-1.8
6,715,895	+		PFLU_RS30190	0.16	+0.2
6,715,895	+		PFLU_RS30190	0.16	-0.4
6,715,895	+		PFLU_RS30190	0.16	+2.4
6,715,895	+		PFLU_RS30190	0.16	-2.2
6,715,895	+		PFLU_RS30190	0.16	+3.6
6,715,896	-		PFLU_RS30190	0.16	+2.3
6,715,896	-		PFLU_RS30190	0.16	-2.3
6,715,896	-		PFLU_RS30190	0.16	+3.0
6,715,896	-		PFLU_RS30190	0.16	-0.4
6,715,896	-		PFLU_RS30190	0.16	-2.0
6,715,940	+		PFLU_RS30190	0.18	-0.4
6,715,940	+		PFLU_RS30190	0.18	+0.8
6,715,940	+		PFLU_RS30190	0.18	-2.0
6,715,940	+		PFLU_RS30190	0.18	+0.8
6,715,940	+		PFLU_RS30190	0.18	+0.2
6,715,940	+		PFLU_RS30190	0.18	+0.1
6,715,940	+		PFLU_RS30190	0.18	-1.7
6,715,940	+		PFLU_RS30190	0.18	+0.2
6,715,941	-		PFLU_RS30190	0.18	-0.4
6,715,941	-		PFLU_RS30190	0.18	+2.4
6,715,941	-		PFLU_RS30190	0.18	+0.8
6,716,030	-		PFLU_RS30190	0.22	-3.2
6,716,072	+		PFLU_RS30190	0.23	-0.2
6,716,072	+		PFLU_RS30190	0.23	-0.9
6,716,072	+		PFLU_RS30190	0.23	+1.9
6,716,073	-		PFLU_RS30190	0.23	-1.6
6,716,073	-		PFLU_RS30190	0.23	+0.5
6,716,073	-		PFLU_RS30190	0.23	-2.0
6,716,073	-		PFLU_RS30190	0.23	+1.0
6,716,073	-		PFLU_RS30190	0.23	-2.0
6,716,073	-		PFLU_RS30190	0.23	-1.0
6,716,162	+		PFLU_RS30190	0.27	+0.5
6,716,191	-		PFLU_RS30190	0.28	-0.8
6,716,196	+		PFLU_RS30190	0.28	-1.7
6,716,196	+		PFLU_RS30190	0.28	-0.2
6,716,196	+		PFLU_RS30190	0.28	-2.0
6,716,196	+		PFLU_RS30190	0.28	-2.3
6,716,196	+		PFLU_RS30190	0.28	+2.0
6,716,196	+		PFLU_RS30190	0.28	+2.4
6,716,196	+		PFLU_RS30190	0.28	+1.2
6,716,196	+		PFLU_RS30190	0.28	-1.2
6,716,196	+		PFLU_RS30190	0.28	+1.2
6,716,196	+		PFLU_RS30190	0.28	+2.5
6,716,197	-		PFLU_RS30190	0.28	-2.2
6,716,197	-		PFLU_RS30190	0.28	+1.3
6,716,197	-		PFLU_RS30190	0.28	+0.1
6,716,197	-		PFLU_RS30190	0.28	-2.5
6,716,197	-		PFLU_RS30190	0.28	+1.2
6,716,210	+		PFLU_RS30190	0.29	-1.1
6,716,232	-		PFLU_RS30190	0.30	-2.5
6,716,232	-		PFLU_RS30190	0.30	-0.8
6,716,280	-		PFLU_RS30190	0.32	+2.1
6,716,398	+		PFLU_RS30190	0.37	-2.0
6,716,399	-		PFLU_RS30190	0.37	+2.0