Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27580

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
6,136,668	-		PFLU_RS27570	0.78	+1.9
6,136,753	+		PFLU_RS27570	0.87	-1.4
6,136,753	+		PFLU_RS27570	0.87	-0.6
6,136,753	+		PFLU_RS27570	0.87	+2.4
6,136,753	+		PFLU_RS27570	0.87	-0.9
6,136,753	+		PFLU_RS27570	0.87	-0.5
6,136,753	+		PFLU_RS27570	0.87	+0.9
6,136,753	+		PFLU_RS27570	0.87	+0.8
6,136,753	+		PFLU_RS27570	0.87	-1.9
6,136,753	+		PFLU_RS27570	0.87	-0.8
6,136,753	+		PFLU_RS27570	0.87	+0.4
6,136,753	+		PFLU_RS27570	0.87	+2.3
6,136,753	+		PFLU_RS27570	0.87	-0.5
6,136,753	+		PFLU_RS27570	0.87	-0.3
6,136,753	+		PFLU_RS27570	0.87	+1.0
6,136,754	-		PFLU_RS27570	0.87	-0.9
6,136,754	-		PFLU_RS27570	0.87	-1.7
6,136,754	-		PFLU_RS27570	0.87	-2.0
6,136,754	-		PFLU_RS27570	0.87	-0.1
6,136,754	-		PFLU_RS27570	0.87	+0.8
6,136,754	-		PFLU_RS27570	0.87	-1.8
6,136,754	-		PFLU_RS27570	0.87	-2.2
6,136,754	-		PFLU_RS27570	0.87	+1.6
6,136,754	-		PFLU_RS27570	0.87	+2.0
6,136,754	-		PFLU_RS27570	0.87	+1.3
6,136,754	-		PFLU_RS27570	0.87	+1.9
6,136,754	-		PFLU_RS27570	0.87	-0.5
6,136,754	-		PFLU_RS27570	0.87	+2.5
6,136,754	-		PFLU_RS27570	0.87	-1.3
6,136,754	-		PFLU_RS27570	0.87	+1.4
6,136,757	+		PFLU_RS27570	0.88	+2.1
6,136,757	+		PFLU_RS27570	0.88	-0.4
6,136,757	+		PFLU_RS27570	0.88	+1.9
6,136,757	+		PFLU_RS27570	0.88	-0.4
6,136,757	+		PFLU_RS27570	0.88	-1.8
6,136,757	+		PFLU_RS27570	0.88	-0.4
6,136,757	+		PFLU_RS27570	0.88	-1.8
6,136,757	+		PFLU_RS27570	0.88	+0.2
6,136,757	+		PFLU_RS27570	0.88	+0.2
6,136,757	+		PFLU_RS27570	0.88	-1.7
6,136,758	-		PFLU_RS27570	0.88	+1.0
6,136,758	-		PFLU_RS27570	0.88	+1.9
6,136,758	-		PFLU_RS27570	0.88	+0.6
6,136,758	-		PFLU_RS27570	0.88	-2.5
6,136,758	-		PFLU_RS27570	0.88	-0.2
6,136,758	-		PFLU_RS27570	0.88	-2.0
6,136,758	-		PFLU_RS27570	0.88	+0.8
6,136,758	-		PFLU_RS27570	0.88	-0.9
6,136,758	-		PFLU_RS27570	0.88	-0.2
6,136,758	-		PFLU_RS27570	0.88	-0.4
6,136,758	-		PFLU_RS27570	0.88	+1.4
6,136,842	+				+0.7
6,136,842	+				-2.5
6,136,842	+				+1.9
6,136,843	-				+0.5
6,136,843	-				+1.2
6,136,866	+				+0.9
6,136,866	+				-0.0
6,136,866	+				-0.9
6,136,866	+				+0.9
6,136,867	-				+0.1
6,136,867	-				+0.3
6,136,943	+				-0.2
6,136,943	+				+1.2
6,136,943	+				+1.8
6,136,943	+				-2.5
6,136,943	+				+1.1
6,136,943	+				-2.9
6,136,943	+				-2.0
6,136,943	+				+2.0
6,136,943	+				+0.1
6,136,943	+				-1.0
6,136,943	+				+0.3
6,136,943	+				+0.1
6,136,943	+				+0.3
6,136,943	+				-0.1
6,136,943	+				-1.3
6,136,944	-				+2.0
6,136,944	-				-1.7
6,136,944	-				-0.8
6,136,944	-				+0.1
6,136,944	-				+1.7
6,136,944	-				-1.6
6,136,944	-				-1.0
6,136,944	-				-1.8
6,136,944	-				-1.6
6,136,944	-				+0.2
6,136,944	-				-0.6
6,136,944	-				+0.1
6,136,944	-				+4.4
6,136,944	-				+0.8
6,136,944	-				-0.2
6,136,944	-				-0.5
6,136,944	-				+1.4
6,136,944	-				+1.1
6,136,944	-				+2.4
6,136,944	-				-0.2
6,136,944	-				+1.8
6,136,944	-				+0.9
6,136,949	-				+0.6
6,136,949	-				-0.3
6,136,962	-		PFLU_RS27575	0.11	+0.9
6,136,962	-		PFLU_RS27575	0.11	+0.8
6,136,976	+		PFLU_RS27575	0.13	+1.2
6,136,976	+		PFLU_RS27575	0.13	-0.8
6,136,976	+		PFLU_RS27575	0.13	-0.3
6,136,976	+		PFLU_RS27575	0.13	+0.2
6,136,976	+		PFLU_RS27575	0.13	-2.8
6,136,976	+		PFLU_RS27575	0.13	-0.1
6,136,976	+		PFLU_RS27575	0.13	+1.6
6,136,976	+		PFLU_RS27575	0.13	+0.3
6,136,977	-		PFLU_RS27575	0.13	+0.0
6,136,977	-		PFLU_RS27575	0.13	+1.6
6,136,977	-		PFLU_RS27575	0.13	+2.7
6,136,977	-		PFLU_RS27575	0.13	-0.4
6,136,977	-		PFLU_RS27575	0.13	+0.6
6,136,977	-		PFLU_RS27575	0.13	+1.4
6,137,030	+		PFLU_RS27575	0.20	-1.9
6,137,030	+		PFLU_RS27575	0.20	-1.2
6,137,030	+		PFLU_RS27575	0.20	+0.3
6,137,031	-		PFLU_RS27575	0.20	+1.1
6,137,031	-		PFLU_RS27575	0.20	+2.1
6,137,031	-		PFLU_RS27575	0.20	+1.9
6,137,031	-		PFLU_RS27575	0.20	-0.4
6,137,031	-		PFLU_RS27575	0.20	-1.0
6,137,033	+		PFLU_RS27575	0.20	-2.1
6,137,033	+		PFLU_RS27575	0.20	-0.4
6,137,034	-		PFLU_RS27575	0.20	+1.4
6,137,034	-		PFLU_RS27575	0.20	+0.3
6,137,034	-		PFLU_RS27575	0.20	-1.0
6,137,034	-		PFLU_RS27575	0.20	-2.1
6,137,170	-		PFLU_RS27575	0.39	+2.7
6,137,170	-		PFLU_RS27575	0.39	+0.1
6,137,258	+		PFLU_RS27575	0.50	-0.4
6,137,258	+		PFLU_RS27575	0.50	+0.5
6,137,258	+		PFLU_RS27575	0.50	-1.8
6,137,258	+		PFLU_RS27575	0.50	+2.5
6,137,258	+		PFLU_RS27575	0.50	-1.6
6,137,258	+		PFLU_RS27575	0.50	-0.2
6,137,258	+		PFLU_RS27575	0.50	+1.0
6,137,258	+		PFLU_RS27575	0.50	+0.3
6,137,258	+		PFLU_RS27575	0.50	+0.6
6,137,259	-		PFLU_RS27575	0.50	+2.4
6,137,259	-		PFLU_RS27575	0.50	+0.9
6,137,259	-		PFLU_RS27575	0.50	+0.5
6,137,259	-		PFLU_RS27575	0.50	-1.3
6,137,259	-		PFLU_RS27575	0.50	-1.6
6,137,370	-		PFLU_RS27575	0.65	+1.4
6,137,399	+		PFLU_RS27575	0.69	+1.2
6,137,399	+		PFLU_RS27575	0.69	+0.9
6,137,399	+		PFLU_RS27575	0.69	-1.7
6,137,399	+		PFLU_RS27575	0.69	+2.4
6,137,399	+		PFLU_RS27575	0.69	+0.4
6,137,399	+		PFLU_RS27575	0.69	+2.9
6,137,399	+		PFLU_RS27575	0.69	-0.9
6,137,400	-		PFLU_RS27575	0.69	-2.9
6,137,400	-		PFLU_RS27575	0.69	+0.1
6,137,400	-		PFLU_RS27575	0.69	-1.8
6,137,400	-		PFLU_RS27575	0.69	+2.0
6,137,400	-		PFLU_RS27575	0.69	+3.2
6,137,400	-		PFLU_RS27575	0.69	+1.0
6,137,400	-		PFLU_RS27575	0.69	-1.0
6,137,400	-		PFLU_RS27575	0.69	+0.5
6,137,468	+		PFLU_RS27575	0.78	-0.2
6,137,468	+		PFLU_RS27575	0.78	+5.0
6,137,468	+		PFLU_RS27575	0.78	-0.4
6,137,468	+		PFLU_RS27575	0.78	-1.7
6,137,468	+		PFLU_RS27575	0.78	-2.2
6,137,468	+		PFLU_RS27575	0.78	-0.4
6,137,468	+		PFLU_RS27575	0.78	-1.8
6,137,468	+		PFLU_RS27575	0.78	+0.4
6,137,468	+		PFLU_RS27575	0.78	-0.9
6,137,469	-		PFLU_RS27575	0.78	-1.5
6,137,469	-		PFLU_RS27575	0.78	+1.9
6,137,469	-		PFLU_RS27575	0.78	+2.6
6,137,469	-		PFLU_RS27575	0.78	+0.0
6,137,469	-		PFLU_RS27575	0.78	+1.2
6,137,469	-		PFLU_RS27575	0.78	+1.9
6,137,469	-		PFLU_RS27575	0.78	+1.5
6,137,469	-		PFLU_RS27575	0.78	+0.2
6,137,469	-		PFLU_RS27575	0.78	+1.9
6,137,469	-		PFLU_RS27575	0.78	-0.2
6,137,469	-		PFLU_RS27575	0.78	-1.5
6,137,469	-		PFLU_RS27575	0.78	+3.2
6,137,469	-		PFLU_RS27575	0.78	+1.5
6,137,469	-		PFLU_RS27575	0.78	+2.0
6,137,561	+				+2.8
6,137,561	+				-2.9
6,137,562	-				+1.0
6,137,562	-				-0.3
6,137,562	-				-0.2
6,137,614	+				+1.5
6,137,629	-				+0.5
6,137,629	-				+1.5
6,137,629	-				+0.6
6,137,652	-				+1.6
6,137,677	+		PFLU_RS27580	0.17	-2.1
6,137,678	-		PFLU_RS27580	0.18	-0.4
6,137,678	-		PFLU_RS27580	0.18	-3.0
6,137,678	-		PFLU_RS27580	0.18	-2.0
6,137,683	+		PFLU_RS27580	0.20	+0.4
6,137,951	+				+0.9
6,137,951	+				+1.5
6,137,951	+				+0.8
6,137,951	+				-1.0
6,137,952	-				+0.8
6,137,952	-				-1.6
6,137,952	-				-0.6
6,137,952	-				-2.8
6,137,952	-				-2.2
6,137,952	-				-0.8
6,137,952	-				+1.8
6,137,975	+				+2.1
6,137,976	-				-1.6
6,137,976	-				-2.0
6,138,155	+		PFLU_RS27585	0.23	+1.7
6,138,155	+		PFLU_RS27585	0.23	+0.5
6,138,155	+		PFLU_RS27585	0.23	+1.2
6,138,155	+		PFLU_RS27585	0.23	+0.3
6,138,155	+		PFLU_RS27585	0.23	+0.1
6,138,155	+		PFLU_RS27585	0.23	+0.1
6,138,155	+		PFLU_RS27585	0.23	-0.2
6,138,155	+		PFLU_RS27585	0.23	+1.8
6,138,156	-		PFLU_RS27585	0.23	+2.7
6,138,156	-		PFLU_RS27585	0.23	-0.6
6,138,156	-		PFLU_RS27585	0.23	-1.8
6,138,156	-		PFLU_RS27585	0.23	+0.4
6,138,156	-		PFLU_RS27585	0.23	-1.3
6,138,382	+		PFLU_RS27585	0.43	+2.3
6,138,415	+		PFLU_RS27585	0.46	-0.2
6,138,415	+		PFLU_RS27585	0.46	-0.2
6,138,415	+		PFLU_RS27585	0.46	-1.4
6,138,415	+		PFLU_RS27585	0.46	-2.4
6,138,415	+		PFLU_RS27585	0.46	+0.1
6,138,415	+		PFLU_RS27585	0.46	+1.4
6,138,415	+		PFLU_RS27585	0.46	+0.8
6,138,415	+		PFLU_RS27585	0.46	+0.8
6,138,415	+		PFLU_RS27585	0.46	-1.3
6,138,416	-		PFLU_RS27585	0.46	+1.1
6,138,416	-		PFLU_RS27585	0.46	-0.9
6,138,416	-		PFLU_RS27585	0.46	+0.8
6,138,416	-		PFLU_RS27585	0.46	+1.1
6,138,416	-		PFLU_RS27585	0.46	-1.4
6,138,416	-		PFLU_RS27585	0.46	-1.8
6,138,416	-		PFLU_RS27585	0.46	+0.7
6,138,438	+		PFLU_RS27585	0.48	+1.0
6,138,438	+		PFLU_RS27585	0.48	-1.2
6,138,438	+		PFLU_RS27585	0.48	+0.1
6,138,439	-		PFLU_RS27585	0.48	-0.6
6,138,439	-		PFLU_RS27585	0.48	+0.3
6,138,439	-		PFLU_RS27585	0.48	-0.3
6,138,439	-		PFLU_RS27585	0.48	+1.9
6,138,461	+		PFLU_RS27585	0.50	+0.6
6,138,461	+		PFLU_RS27585	0.50	-0.3
6,138,461	+		PFLU_RS27585	0.50	+3.1
6,138,461	+		PFLU_RS27585	0.50	-0.6
6,138,461	+		PFLU_RS27585	0.50	-3.1
6,138,462	-		PFLU_RS27585	0.50	-1.0
6,138,462	-		PFLU_RS27585	0.50	-1.2
6,138,462	-		PFLU_RS27585	0.50	-0.4
6,138,462	-		PFLU_RS27585	0.50	+0.1
6,138,542	+		PFLU_RS27585	0.57	-0.9
6,138,603	-		PFLU_RS27585	0.62	-0.5
6,138,605	+		PFLU_RS27585	0.63	-1.8
6,138,605	+		PFLU_RS27585	0.63	-0.7
6,138,605	+		PFLU_RS27585	0.63	-1.3
6,138,605	+		PFLU_RS27585	0.63	-0.6
6,138,606	-		PFLU_RS27585	0.63	-2.8
6,138,606	-		PFLU_RS27585	0.63	-0.6
6,138,606	-		PFLU_RS27585	0.63	-2.2
6,138,606	-		PFLU_RS27585	0.63	+0.4
6,138,646	+		PFLU_RS27585	0.66	+1.4
6,138,647	-		PFLU_RS27585	0.66	+0.4
6,138,756	-		PFLU_RS27585	0.76	+0.1