Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08050

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
1,793,032	+		PFLU_RS08045	0.17	+2.3
1,793,032	+		PFLU_RS08045	0.17	+0.3
1,793,032	+		PFLU_RS08045	0.17	-2.0
1,793,032	+		PFLU_RS08045	0.17	+0.6
1,793,033	-		PFLU_RS08045	0.17	+2.6
1,793,033	-		PFLU_RS08045	0.17	+0.7
1,793,033	-		PFLU_RS08045	0.17	-1.8
1,793,033	-		PFLU_RS08045	0.17	-0.7
1,793,033	-		PFLU_RS08045	0.17	+1.8
1,793,079	+		PFLU_RS08045	0.21	-2.0
1,793,080	-		PFLU_RS08045	0.22	-0.0
1,793,080	-		PFLU_RS08045	0.22	+1.5
1,793,080	-		PFLU_RS08045	0.22	-1.2
1,793,080	-		PFLU_RS08045	0.22	+3.2
1,793,133	+		PFLU_RS08045	0.27	-0.7
1,793,134	-		PFLU_RS08045	0.27	-1.1
1,793,324	+		PFLU_RS08045	0.47	-0.3
1,793,324	+		PFLU_RS08045	0.47	+0.3
1,793,324	+		PFLU_RS08045	0.47	-1.0
1,793,325	-		PFLU_RS08045	0.47	+1.6
1,793,325	-		PFLU_RS08045	0.47	-0.5
1,793,325	-		PFLU_RS08045	0.47	-0.6
1,793,325	-		PFLU_RS08045	0.47	+1.1
1,793,558	+		PFLU_RS08045	0.71	-0.3
1,793,558	+		PFLU_RS08045	0.71	-1.4
1,793,558	+		PFLU_RS08045	0.71	+1.9
1,793,558	+		PFLU_RS08045	0.71	+1.0
1,793,558	+		PFLU_RS08045	0.71	+3.3
1,793,558	+		PFLU_RS08045	0.71	-2.2
1,793,558	+		PFLU_RS08045	0.71	+1.6
1,793,558	+		PFLU_RS08045	0.71	-1.2
1,793,558	+		PFLU_RS08045	0.71	-2.5
1,793,558	+		PFLU_RS08045	0.71	+0.7
1,793,558	+		PFLU_RS08045	0.71	-1.2
1,793,558	+		PFLU_RS08045	0.71	-1.0
1,793,558	+		PFLU_RS08045	0.71	+0.4
1,793,558	+		PFLU_RS08045	0.71	-0.9
1,793,559	-		PFLU_RS08045	0.72	-2.5
1,793,559	-		PFLU_RS08045	0.72	-2.7
1,793,559	-		PFLU_RS08045	0.72	+0.2
1,793,559	-		PFLU_RS08045	0.72	-0.5
1,793,559	-		PFLU_RS08045	0.72	-2.4
1,793,559	-		PFLU_RS08045	0.72	+1.8
1,793,559	-		PFLU_RS08045	0.72	-0.0
1,793,559	-		PFLU_RS08045	0.72	-0.9
1,793,559	-		PFLU_RS08045	0.72	+0.7
1,793,559	-		PFLU_RS08045	0.72	+0.8
1,793,559	-		PFLU_RS08045	0.72	-0.0
1,793,559	-		PFLU_RS08045	0.72	+1.0
1,793,591	+		PFLU_RS08045	0.75	+0.8
1,793,591	+		PFLU_RS08045	0.75	-0.9
1,793,591	+		PFLU_RS08045	0.75	+1.9
1,793,592	-		PFLU_RS08045	0.75	-1.2
1,793,621	+		PFLU_RS08045	0.78	+0.7
1,793,621	+		PFLU_RS08045	0.78	+1.8
1,793,621	+		PFLU_RS08045	0.78	+1.5
1,793,622	-		PFLU_RS08045	0.78	+1.0
1,793,622	-		PFLU_RS08045	0.78	-2.0
1,793,622	-		PFLU_RS08045	0.78	+2.4
1,793,622	-		PFLU_RS08045	0.78	+0.7
1,793,622	-		PFLU_RS08045	0.78	-0.6
1,793,767	+				-2.0
1,794,511	+		PFLU_RS08050	0.70	+1.9
1,794,511	+		PFLU_RS08050	0.70	+1.5
1,794,511	+		PFLU_RS08050	0.70	+0.8
1,794,511	+		PFLU_RS08050	0.70	+2.5
1,794,511	+		PFLU_RS08050	0.70	+2.6
1,794,511	+		PFLU_RS08050	0.70	-1.3
1,794,511	+		PFLU_RS08050	0.70	+0.7
1,794,511	+		PFLU_RS08050	0.70	-2.7
1,794,511	+		PFLU_RS08050	0.70	-1.2
1,794,511	+		PFLU_RS08050	0.70	-2.3
1,794,511	+		PFLU_RS08050	0.70	+0.8
1,794,512	-		PFLU_RS08050	0.70	+2.3
1,794,512	-		PFLU_RS08050	0.70	+2.0
1,794,512	-		PFLU_RS08050	0.70	-1.4
1,794,512	-		PFLU_RS08050	0.70	+1.3
1,794,555	+		PFLU_RS08050	0.75	-0.7
1,794,555	+		PFLU_RS08050	0.75	+1.1
1,794,555	+		PFLU_RS08050	0.75	-2.0
1,794,556	-		PFLU_RS08050	0.75	+0.8
1,794,556	-		PFLU_RS08050	0.75	-0.0
1,794,556	-		PFLU_RS08050	0.75	-1.5
1,794,556	-		PFLU_RS08050	0.75	+0.1
1,794,574	+		PFLU_RS08050	0.77	+1.9
1,794,574	+		PFLU_RS08050	0.77	-0.2
1,794,626	+		PFLU_RS08050	0.82	+0.8
1,794,630	+		PFLU_RS08050	0.83	+0.2
1,794,630	+		PFLU_RS08050	0.83	-1.3
1,794,631	-		PFLU_RS08050	0.83	+0.8
1,794,631	-		PFLU_RS08050	0.83	+1.8
1,794,631	-		PFLU_RS08050	0.83	+0.7
1,794,631	-		PFLU_RS08050	0.83	+0.3
1,794,631	-		PFLU_RS08050	0.83	-0.3
1,794,766	+				-0.3
1,794,766	+				+1.3
1,794,796	+				+3.4
1,794,814	+				+3.3
1,794,814	+				-1.5
1,794,814	+				-0.0
1,794,830	+				+1.4
1,794,830	+				+1.3
1,794,831	-				+1.2
1,794,831	-				+0.6
1,794,831	-				+1.1
1,794,916	+				+0.3
1,794,916	+				-0.5
1,794,916	+				-1.0
1,794,916	+				+1.9
1,794,916	+				+0.5
1,794,916	+				+0.5
1,794,916	+				-1.5
1,794,916	+				-0.5
1,794,916	+				+1.0
1,794,916	+				-0.4
1,794,916	+				-0.9
1,794,916	+				+0.9
1,794,916	+				-0.0
1,794,916	+				-0.4
1,794,916	+				-1.4
1,794,916	+				-2.0
1,794,916	+				-1.4
1,794,917	-				-1.6
1,794,917	-				-1.5
1,794,917	-				-0.4
1,794,917	-				+0.7
1,794,917	-				+0.9
1,794,917	-				-0.3
1,794,917	-				+1.4
1,794,917	-				-0.3
1,794,917	-				+0.2
1,794,917	-				+2.3
1,794,917	-				+3.1
1,794,917	-				+2.3
1,795,005	+		PFLU_RS08055	0.11	-1.5
1,795,005	+		PFLU_RS08055	0.11	-2.5
1,795,006	-		PFLU_RS08055	0.12	-2.0
1,795,006	-		PFLU_RS08055	0.12	-1.7
1,795,095	+		PFLU_RS08055	0.17	-1.5
1,795,095	+		PFLU_RS08055	0.17	-1.2
1,795,095	+		PFLU_RS08055	0.17	+1.0
1,795,095	+		PFLU_RS08055	0.17	-1.3
1,795,095	+		PFLU_RS08055	0.17	-1.2
1,795,095	+		PFLU_RS08055	0.17	+2.9
1,795,095	+		PFLU_RS08055	0.17	+1.9
1,795,096	-		PFLU_RS08055	0.17	-1.2
1,795,096	-		PFLU_RS08055	0.17	-1.7
1,795,096	-		PFLU_RS08055	0.17	+1.2
1,795,096	-		PFLU_RS08055	0.17	+2.7
1,795,096	-		PFLU_RS08055	0.17	+0.6
1,795,096	-		PFLU_RS08055	0.17	+0.3
1,795,096	-		PFLU_RS08055	0.17	-0.7
1,795,096	-		PFLU_RS08055	0.17	-0.0
1,795,168	+		PFLU_RS08055	0.22	-0.5
1,795,168	+		PFLU_RS08055	0.22	+0.7
1,795,168	+		PFLU_RS08055	0.22	-0.4
1,795,168	+		PFLU_RS08055	0.22	-1.0
1,795,169	-		PFLU_RS08055	0.22	-1.6
1,795,169	-		PFLU_RS08055	0.22	-1.7
1,795,176	-		PFLU_RS08055	0.23	-3.1
1,795,362	+		PFLU_RS08055	0.35	+2.1
1,795,562	-		PFLU_RS08055	0.48	+0.5
1,795,740	+		PFLU_RS08055	0.60	+2.3
1,795,740	+		PFLU_RS08055	0.60	-1.8
1,795,740	+		PFLU_RS08055	0.60	-2.2
1,795,740	+		PFLU_RS08055	0.60	-0.0
1,795,740	+		PFLU_RS08055	0.60	+1.1
1,795,741	-		PFLU_RS08055	0.60	+0.7
1,795,741	-		PFLU_RS08055	0.60	+1.6
1,795,741	-		PFLU_RS08055	0.60	+2.8
1,795,741	-		PFLU_RS08055	0.60	-0.7
1,795,741	-		PFLU_RS08055	0.60	+0.7
1,795,741	-		PFLU_RS08055	0.60	+0.8
1,795,741	-		PFLU_RS08055	0.60	-0.4
1,795,741	-		PFLU_RS08055	0.60	+1.2
1,795,741	-		PFLU_RS08055	0.60	-1.0
1,795,761	+		PFLU_RS08055	0.61	-1.8
1,795,761	+		PFLU_RS08055	0.61	-1.3
1,795,761	+		PFLU_RS08055	0.61	+0.3
1,795,762	-		PFLU_RS08055	0.61	-0.0
1,795,762	-		PFLU_RS08055	0.61	-0.3
1,795,762	-		PFLU_RS08055	0.61	-0.0
1,795,762	-		PFLU_RS08055	0.61	-1.3
1,795,762	-		PFLU_RS08055	0.61	-0.9
1,795,767	+		PFLU_RS08055	0.62	+0.7
1,795,767	+		PFLU_RS08055	0.62	+0.7
1,795,767	+		PFLU_RS08055	0.62	+1.3
1,795,767	+		PFLU_RS08055	0.62	-0.7
1,795,767	+		PFLU_RS08055	0.62	+0.2
1,795,767	+		PFLU_RS08055	0.62	+0.8
1,795,767	+		PFLU_RS08055	0.62	-1.6
1,795,767	+		PFLU_RS08055	0.62	+1.6
1,795,768	-		PFLU_RS08055	0.62	+1.4
1,795,768	-		PFLU_RS08055	0.62	-1.6
1,795,768	-		PFLU_RS08055	0.62	-0.5
1,795,768	-		PFLU_RS08055	0.62	-1.0
1,795,768	-		PFLU_RS08055	0.62	+0.1
1,795,768	-		PFLU_RS08055	0.62	+0.5
1,795,788	+		PFLU_RS08055	0.63	+1.2
1,795,788	+		PFLU_RS08055	0.63	+1.0
1,795,789	-		PFLU_RS08055	0.63	-0.0
1,795,789	-		PFLU_RS08055	0.63	+1.4
1,795,789	-		PFLU_RS08055	0.63	+0.8
1,795,789	-		PFLU_RS08055	0.63	+0.3
1,795,795	-		PFLU_RS08055	0.64	-0.5
1,795,795	-		PFLU_RS08055	0.64	+1.3
1,795,795	-		PFLU_RS08055	0.64	-0.8