Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1301

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B
1,535,078	+				-0.9
1,535,081	+				-0.6
1,535,081	+				+1.0
1,535,082	-				+0.2
1,535,082	-				-0.7
1,535,082	-				-0.3
1,535,139	-				-0.5
1,535,273	-		Pf6N2E2_1300	0.18	-0.3
1,535,273	-		Pf6N2E2_1300	0.18	-1.8
1,535,273	-		Pf6N2E2_1300	0.18	+1.0
1,535,274	+		Pf6N2E2_1300	0.18	+0.4
1,535,274	+		Pf6N2E2_1300	0.18	-1.5
1,535,274	+		Pf6N2E2_1300	0.18	+1.5
1,535,275	-		Pf6N2E2_1300	0.19	+0.3
1,535,467	+		Pf6N2E2_1300	0.43	+2.5
1,535,779	+		Pf6N2E2_1300	0.82	+0.1
1,535,830	+		Pf6N2E2_1300	0.89	-0.2
1,535,830	+		Pf6N2E2_1300	0.89	-0.8
1,535,830	+		Pf6N2E2_1300	0.89	-0.2
1,535,830	+		Pf6N2E2_1300	0.89	-0.0
1,535,830	+		Pf6N2E2_1300	0.89	+0.1
1,535,830	+		Pf6N2E2_1300	0.89	+0.2
1,535,830	+		Pf6N2E2_1300	0.89	+0.2
1,535,831	-		Pf6N2E2_1300	0.89	+0.5
1,536,111	+				+0.7
1,536,112	-				-0.4
1,536,112	-				+0.8
1,536,405	+		Pf6N2E2_1301	0.32	+0.5
1,536,405	+		Pf6N2E2_1301	0.32	+0.5
1,536,406	-		Pf6N2E2_1301	0.32	-0.3
1,536,421	-		Pf6N2E2_1301	0.34	+0.5
1,536,492	+		Pf6N2E2_1301	0.41	+0.7
1,536,492	+		Pf6N2E2_1301	0.41	+0.7
1,536,619	+		Pf6N2E2_1301	0.53	-0.0
1,536,619	+		Pf6N2E2_1301	0.53	+0.8
1,536,619	+		Pf6N2E2_1301	0.53	+0.2
1,536,619	+		Pf6N2E2_1301	0.53	+0.6
1,536,620	-		Pf6N2E2_1301	0.53	+0.5
1,536,620	-		Pf6N2E2_1301	0.53	+0.8
1,536,778	-				-0.5
1,536,778	-		Pf6N2E2_1301	0.69	-1.6
1,537,113	+				-1.5
1,537,113	+				-0.2
1,537,122	-				+0.5
1,537,634	+		Pf6N2E2_1302	0.38	+1.5
1,537,634	+		Pf6N2E2_1302	0.38	+0.9
1,537,635	-		Pf6N2E2_1302	0.38	+1.5
1,537,635	-		Pf6N2E2_1302	0.38	-0.0
1,537,856	+		Pf6N2E2_1302	0.55	+0.5
1,537,856	+		Pf6N2E2_1302	0.55	-0.2
1,537,856	+		Pf6N2E2_1302	0.55	-0.9
1,537,856	+		Pf6N2E2_1302	0.55	+0.4
1,537,856	+		Pf6N2E2_1302	0.55	+0.5
1,537,857	-		Pf6N2E2_1302	0.55	-0.0