Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10420

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
2,296,291	-				+0.7
2,296,291	-				-0.3
2,296,291	-				-0.8
2,296,291	-				+1.2
2,296,291	-				-2.4
2,296,291	-				+3.4
2,296,658	+				-2.2
2,296,658	+				-1.7
2,296,658	+				+0.8
2,296,658	+				-0.1
2,296,658	+				+0.7
2,296,658	+				+0.5
2,296,658	+				-1.8
2,296,659	-				-1.3
2,296,659	-				+0.9
2,296,659	-				-0.1
2,296,659	-				+1.0
2,296,659	-				+1.0
2,296,659	-				+1.7
2,296,659	-				-0.6
2,296,659	-				-1.2
2,296,659	-				-0.1
2,296,760	+				-1.3
2,296,764	+				-0.3
2,296,764	+				+0.4
2,296,764	+				+1.2
2,296,764	+				+1.3
2,296,764	+				+1.1
2,296,857	-				-1.1
2,296,857	-				-1.8
2,296,861	-				+1.7
2,296,861	-				-1.8
2,297,205	-				-2.0
2,297,224	-				-1.2
2,297,224	-				-1.3
2,297,236	-				+0.2
2,297,236	-				+0.1
2,297,236	-				+0.4
2,297,246	+				+2.2
2,297,246	+				+1.2
2,297,246	+				-1.1
2,297,246	+				+2.1
2,297,246	+				+2.7
2,297,246	+				-1.3
2,297,246	+				-1.6
2,297,246	+				+1.2
2,297,247	-				+0.9
2,297,247	-				-0.8
2,297,247	-				-0.9
2,297,247	-				+1.1
2,297,247	-				-0.6
2,297,247	-				-0.3
2,297,332	-				+2.7
2,297,332	-				+1.0
2,297,415	+		PFLU_RS10420	0.17	-0.2
2,297,415	+		PFLU_RS10420	0.17	+0.2
2,297,416	-		PFLU_RS10420	0.17	+1.6
2,297,438	+		PFLU_RS10420	0.19	+2.2
2,297,439	-		PFLU_RS10420	0.19	-2.0
2,297,553	+		PFLU_RS10420	0.30	-2.5
2,297,595	+		PFLU_RS10420	0.33	-0.2
2,297,905	-		PFLU_RS10420	0.62	+0.2
2,298,019	+		PFLU_RS10420	0.73	-0.3
2,298,019	+		PFLU_RS10420	0.73	-0.2
2,298,019	+		PFLU_RS10420	0.73	+0.8
2,298,019	+		PFLU_RS10420	0.73	-1.5
2,298,019	+		PFLU_RS10420	0.73	+1.8
2,298,019	+		PFLU_RS10420	0.73	-1.3
2,298,020	-		PFLU_RS10420	0.73	-1.3
2,298,020	-		PFLU_RS10420	0.73	+0.3
2,298,020	-		PFLU_RS10420	0.73	+1.2
2,298,020	-		PFLU_RS10420	0.73	-0.3
2,298,020	-		PFLU_RS10420	0.73	-0.2
2,298,020	-		PFLU_RS10420	0.73	+1.5
2,298,020	-		PFLU_RS10420	0.73	+0.5
2,298,021	+		PFLU_RS10420	0.73	-1.8
2,298,021	+		PFLU_RS10420	0.73	-1.7
2,298,021	+		PFLU_RS10420	0.73	-0.6
2,298,021	+		PFLU_RS10420	0.73	+1.4
2,298,021	+		PFLU_RS10420	0.73	+1.2
2,298,021	+		PFLU_RS10420	0.73	-0.9
2,298,021	+		PFLU_RS10420	0.73	+2.4
2,298,021	+		PFLU_RS10420	0.73	+1.9
2,298,021	+		PFLU_RS10420	0.73	-0.2
2,298,021	+		PFLU_RS10420	0.73	-0.3
2,298,021	+		PFLU_RS10420	0.73	+1.7
2,298,022	-		PFLU_RS10420	0.73	-0.6
2,298,022	-		PFLU_RS10420	0.73	+0.7
2,298,022	-		PFLU_RS10420	0.73	+0.2
2,298,022	-		PFLU_RS10420	0.73	-2.5
2,298,022	-		PFLU_RS10420	0.73	+0.9
2,298,022	-		PFLU_RS10420	0.73	+2.1
2,298,022	-		PFLU_RS10420	0.73	-0.9
2,298,022	-		PFLU_RS10420	0.73	+1.2
2,298,022	-		PFLU_RS10420	0.73	+2.2
2,298,022	-		PFLU_RS10420	0.73	-1.8
2,298,022	-		PFLU_RS10420	0.73	+0.5
2,298,022	-		PFLU_RS10420	0.73	+0.7
2,298,022	-		PFLU_RS10420	0.73	+1.9
2,298,022	-		PFLU_RS10420	0.73	+0.1
2,298,022	-		PFLU_RS10420	0.73	+0.3
2,298,023	+		PFLU_RS10420	0.73	+0.2
2,298,023	+		PFLU_RS10420	0.73	-1.5
2,298,023	+		PFLU_RS10420	0.73	+0.5
2,298,023	+		PFLU_RS10420	0.73	+0.9
2,298,023	+		PFLU_RS10420	0.73	+1.4
2,298,023	+		PFLU_RS10420	0.73	-0.3
2,298,023	+		PFLU_RS10420	0.73	-1.5
2,298,023	+		PFLU_RS10420	0.73	+0.7
2,298,023	+		PFLU_RS10420	0.73	-1.8
2,298,023	+		PFLU_RS10420	0.73	+2.8
2,298,023	+		PFLU_RS10420	0.73	+3.7
2,298,023	+		PFLU_RS10420	0.73	+0.8
2,298,023	+		PFLU_RS10420	0.73	+2.1
2,298,023	+		PFLU_RS10420	0.73	+1.7
2,298,023	+		PFLU_RS10420	0.73	-0.3
2,298,024	-		PFLU_RS10420	0.73	-0.8
2,298,024	-		PFLU_RS10420	0.73	-0.2
2,298,024	-		PFLU_RS10420	0.73	-1.8
2,298,024	-		PFLU_RS10420	0.73	+0.9
2,298,024	-		PFLU_RS10420	0.73	+0.3
2,298,024	-		PFLU_RS10420	0.73	+2.5
2,298,024	-		PFLU_RS10420	0.73	-1.5
2,298,024	-		PFLU_RS10420	0.73	+0.2
2,298,024	-		PFLU_RS10420	0.73	-0.7
2,298,024	-		PFLU_RS10420	0.73	-0.3
2,298,024	-		PFLU_RS10420	0.73	+2.6
2,298,314	-				+0.7
2,298,344	-				-2.0
2,298,344	-				+0.2
2,298,344	-				+0.7
2,298,346	-				+0.7
2,298,346	-				-0.2
2,298,346	-				+0.7
2,298,346	-				+0.1
2,298,414	+				+1.8
2,298,414	+				+0.2
2,298,414	+				+0.7
2,298,414	+				+0.1
2,298,414	+				+3.5
2,298,414	+				-0.1
2,298,415	-				-2.6
2,298,415	-				-1.3
2,298,415	-				+4.0
2,298,428	+				-0.2
2,298,428	+				-1.4
2,298,428	+				-2.2
2,298,429	-				-1.3
2,298,468	+				-0.3
2,298,468	+				-0.6
2,298,468	+				+0.2
2,298,468	+				-0.8
2,298,468	+				+1.2
2,298,468	+				-1.9
2,298,468	+				+1.7
2,298,469	-				+1.5
2,298,469	-				+2.2
2,298,469	-				+1.1
2,298,469	-				+0.4
2,298,576	+		PFLU_RS10425	0.34	+0.3
2,298,576	+		PFLU_RS10425	0.34	-1.6
2,298,576	+		PFLU_RS10425	0.34	-0.3
2,298,577	-		PFLU_RS10425	0.35	+1.0
2,298,577	-		PFLU_RS10425	0.35	+1.7
2,298,577	-		PFLU_RS10425	0.35	+0.4
2,298,577	-		PFLU_RS10425	0.35	-0.1
2,298,577	-		PFLU_RS10425	0.35	+1.0
2,298,577	-		PFLU_RS10425	0.35	-1.2
2,298,577	-		PFLU_RS10425	0.35	+4.2
2,298,579	+		PFLU_RS10425	0.35	-1.3
2,298,579	+		PFLU_RS10425	0.35	+1.8
2,298,579	+		PFLU_RS10425	0.35	-1.8
2,298,579	+		PFLU_RS10425	0.35	-0.6
2,298,580	-		PFLU_RS10425	0.36	-1.8
2,298,580	-		PFLU_RS10425	0.36	-0.7
2,298,580	-		PFLU_RS10425	0.36	-0.7
2,298,580	-		PFLU_RS10425	0.36	+0.8
2,298,580	-		PFLU_RS10425	0.36	+0.1
2,298,580	-		PFLU_RS10425	0.36	+1.1
2,298,580	-		PFLU_RS10425	0.36	+2.2
2,298,580	-		PFLU_RS10425	0.36	+2.0
2,298,580	-		PFLU_RS10425	0.36	-1.8
2,298,580	-		PFLU_RS10425	0.36	+3.1
2,298,580	-		PFLU_RS10425	0.36	+0.0
2,298,580	-		PFLU_RS10425	0.36	-2.6
2,298,580	-		PFLU_RS10425	0.36	-0.9
2,298,673	+		PFLU_RS10425	0.66	-2.2
2,298,673	+		PFLU_RS10425	0.66	-1.8
2,298,673	+		PFLU_RS10425	0.66	-0.9
2,298,673	+		PFLU_RS10425	0.66	-1.5
2,298,673	+		PFLU_RS10425	0.66	-1.0
2,298,673	+		PFLU_RS10425	0.66	+0.1
2,298,673	+		PFLU_RS10425	0.66	+0.8
2,298,674	-		PFLU_RS10425	0.67	+1.6
2,298,674	-		PFLU_RS10425	0.67	+0.2
2,298,674	-		PFLU_RS10425	0.67	+0.1
2,298,674	-		PFLU_RS10425	0.67	+2.6
2,298,674	-		PFLU_RS10425	0.67	-1.3
2,298,674	-		PFLU_RS10425	0.67	-2.1
2,298,674	-		PFLU_RS10425	0.67	-1.5
2,298,674	-		PFLU_RS10425	0.67	-1.1
2,298,674	-		PFLU_RS10425	0.67	+0.8
2,298,674	-		PFLU_RS10425	0.67	-1.5
2,298,674	-		PFLU_RS10425	0.67	+2.2
2,298,674	-		PFLU_RS10425	0.67	-0.2
2,298,674	-		PFLU_RS10425	0.67	+1.7
2,298,679	+		PFLU_RS10425	0.68	-1.2
2,298,679	+		PFLU_RS10425	0.68	+2.7
2,298,679	+		PFLU_RS10425	0.68	+1.2
2,298,680	-		PFLU_RS10425	0.69	-1.8
2,298,769	-				+1.2
2,298,772	+				-2.7
2,298,772	+				+2.2
2,298,773	-				+0.2
2,298,773	-				-2.8
2,298,773	-				-0.8
2,298,773	-				+0.7
2,298,773	-				-1.1
2,298,773	-				-1.8
2,298,773	-				-0.8
2,298,773	-				-0.1
2,298,773	-				-1.9
2,298,773	-				-1.5
2,298,773	-				-0.3
2,298,773	-				-2.0
2,298,773	-				-0.9
2,298,773	-				-1.5
2,298,773	-				-1.8
2,298,988	-		PFLU_RS10430	0.69	+1.2
2,298,988	-		PFLU_RS10430	0.69	-0.2
2,298,988	-		PFLU_RS10430	0.69	+0.7
2,298,988	-		PFLU_RS10430	0.69	-0.1
2,298,994	-		PFLU_RS10430	0.71	-1.2
2,298,994	-		PFLU_RS10430	0.71	-1.1
2,298,994	-		PFLU_RS10430	0.71	-1.1
2,298,994	-		PFLU_RS10430	0.71	-2.1
2,298,994	-		PFLU_RS10430	0.71	-0.9
2,298,994	-		PFLU_RS10430	0.71	-0.3
2,298,994	-		PFLU_RS10430	0.71	-2.1
2,299,113	+				-0.3
2,299,113	+				+0.4
2,299,113	+				+1.5
2,299,113	+				-1.5
2,299,113	+				-2.0
2,299,114	-				-0.3
2,299,114	-				+0.1
2,299,114	-				+2.9
2,299,114	-				+0.2
2,299,114	-				-2.1
2,299,114	-				-0.9
2,299,158	-		PFLU_RS10435	0.11	+1.5
2,299,158	-		PFLU_RS10435	0.11	-0.4
2,299,158	-		PFLU_RS10435	0.11	-0.3
2,299,197	-		PFLU_RS10435	0.17	+1.2