Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02635 and PFLU_RS02640 are separated by 28 nucleotides PFLU_RS02640 and PFLU_RS02645 are separated by 36 nucleotides PFLU_RS02645 and PFLU_RS02650 are separated by 18 nucleotides PFLU_RS02650 and PFLU_RS02655 are separated by 110 nucleotides
PFLU_RS02635: PFLU_RS02635 - 30S ribosomal protein S6, at 605,625 to 606,047
_RS02635
PFLU_RS02640: PFLU_RS02640 - 30S ribosomal protein S18, at 606,076 to 606,306
_RS02640
PFLU_RS02645: PFLU_RS02645 - hypothetical protein, at 606,343 to 607,236
_RS02645
PFLU_RS02650: PFLU_RS02650 - 50S ribosomal protein L9, at 607,255 to 607,701
_RS02650
PFLU_RS02655: PFLU_RS02655 - replicative DNA helicase, at 607,812 to 609,209
_RS02655
Position (kb) 606
607
608 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.383 kb on + strand at 605.384 kb on - strand at 605.384 kb on - strand at 605.384 kb on - strand at 605.384 kb on - strand at 605.384 kb on - strand at 605.384 kb on - strand at 605.384 kb on - strand at 605.384 kb on - strand at 605.384 kb on - strand at 605.384 kb on - strand at 605.384 kb on - strand at 605.384 kb on - strand at 605.462 kb on + strand at 605.462 kb on + strand at 605.463 kb on - strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.328 kb on + strand at 606.328 kb on + strand at 606.328 kb on + strand at 606.353 kb on + strand at 606.353 kb on + strand at 606.427 kb on + strand at 606.427 kb on + strand at 606.427 kb on + strand at 606.427 kb on + strand at 606.427 kb on + strand at 606.427 kb on + strand at 606.554 kb on + strand, within PFLU_RS02645 at 606.554 kb on + strand, within PFLU_RS02645 at 606.554 kb on + strand, within PFLU_RS02645 at 606.554 kb on + strand, within PFLU_RS02645 at 606.554 kb on + strand, within PFLU_RS02645 at 606.748 kb on + strand, within PFLU_RS02645 at 606.748 kb on + strand, within PFLU_RS02645 at 606.748 kb on + strand, within PFLU_RS02645 at 606.764 kb on + strand, within PFLU_RS02645 at 606.764 kb on + strand, within PFLU_RS02645 at 606.886 kb on + strand, within PFLU_RS02645 at 606.887 kb on - strand, within PFLU_RS02645 at 607.022 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.109 kb on + strand, within PFLU_RS02645 at 607.109 kb on + strand, within PFLU_RS02645 at 607.109 kb on + strand, within PFLU_RS02645 at 607.138 kb on + strand, within PFLU_RS02645 at 607.138 kb on + strand, within PFLU_RS02645 at 607.138 kb on + strand, within PFLU_RS02645 at 607.138 kb on + strand, within PFLU_RS02645 at 607.138 kb on + strand, within PFLU_RS02645 at 607.234 kb on + strand at 607.699 kb on + strand at 607.741 kb on + strand at 607.741 kb on + strand at 607.741 kb on + strand at 607.763 kb on + strand at 607.763 kb on + strand at 607.787 kb on + strand at 607.797 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride remove 605,383 + +2.2 605,383 + +2.5 605,383 + -2.6 605,383 + -1.8 605,383 + -0.8 605,383 + +3.0 605,383 + +1.0 605,383 + +1.3 605,383 + -3.3 605,383 + +0.7 605,383 + +2.3 605,383 + +0.5 605,383 + -1.7 605,383 + +2.1 605,383 + -1.5 605,383 + -0.1 605,383 + +1.1 605,383 + -1.2 605,383 + +0.7 605,383 + +1.0 605,383 + +0.9 605,384 - +0.3 605,384 - +0.3 605,384 - +2.2 605,384 - -1.3 605,384 - +0.9 605,384 - -0.1 605,384 - +1.9 605,384 - -0.7 605,384 - +0.2 605,384 - +1.2 605,384 - +2.5 605,384 - +1.2 605,462 + -1.5 605,462 + +2.3 605,463 - -1.0 606,325 + -0.6 606,325 + +1.4 606,325 + +0.8 606,325 + +1.4 606,325 + -0.5 606,325 + +0.0 606,325 + +1.4 606,325 + +0.8 606,328 + +1.4 606,328 + +1.4 606,328 + +2.4 606,353 + +0.0 606,353 + -0.5 606,427 + +1.4 606,427 + +2.4 606,427 + -0.2 606,427 + -0.2 606,427 + -0.2 606,427 + +0.8 606,554 + PFLU_RS02645 0.24 -0.2 606,554 + PFLU_RS02645 0.24 -0.6 606,554 + PFLU_RS02645 0.24 -2.2 606,554 + PFLU_RS02645 0.24 -0.8 606,554 + PFLU_RS02645 0.24 -1.3 606,748 + PFLU_RS02645 0.45 -1.0 606,748 + PFLU_RS02645 0.45 -0.2 606,748 + PFLU_RS02645 0.45 -0.1 606,764 + PFLU_RS02645 0.47 -0.5 606,764 + PFLU_RS02645 0.47 -0.5 606,886 + PFLU_RS02645 0.61 -1.5 606,887 - PFLU_RS02645 0.61 +0.8 607,022 + PFLU_RS02645 0.76 -1.5 607,105 + PFLU_RS02645 0.85 -0.5 607,105 + PFLU_RS02645 0.85 -1.2 607,105 + PFLU_RS02645 0.85 -2.4 607,105 + PFLU_RS02645 0.85 -1.6 607,105 + PFLU_RS02645 0.85 -2.2 607,105 + PFLU_RS02645 0.85 -0.8 607,105 + PFLU_RS02645 0.85 -2.2 607,105 + PFLU_RS02645 0.85 +0.8 607,105 + PFLU_RS02645 0.85 -2.8 607,105 + PFLU_RS02645 0.85 -1.7 607,105 + PFLU_RS02645 0.85 -1.0 607,105 + PFLU_RS02645 0.85 -1.9 607,105 + PFLU_RS02645 0.85 -1.8 607,105 + PFLU_RS02645 0.85 +0.6 607,105 + PFLU_RS02645 0.85 +0.8 607,105 + PFLU_RS02645 0.85 +0.5 607,105 + PFLU_RS02645 0.85 -2.0 607,105 + PFLU_RS02645 0.85 +0.0 607,105 + PFLU_RS02645 0.85 -0.1 607,105 + PFLU_RS02645 0.85 -2.3 607,105 + PFLU_RS02645 0.85 -0.3 607,105 + PFLU_RS02645 0.85 -0.8 607,105 + PFLU_RS02645 0.85 -1.0 607,105 + PFLU_RS02645 0.85 -0.2 607,105 + PFLU_RS02645 0.85 -1.0 607,105 + PFLU_RS02645 0.85 +0.8 607,105 + PFLU_RS02645 0.85 -2.4 607,105 + PFLU_RS02645 0.85 -1.2 607,105 + PFLU_RS02645 0.85 -1.0 607,105 + PFLU_RS02645 0.85 +0.0 607,105 + PFLU_RS02645 0.85 +0.9 607,105 + PFLU_RS02645 0.85 -0.5 607,105 + PFLU_RS02645 0.85 -1.1 607,105 + PFLU_RS02645 0.85 -0.6 607,105 + PFLU_RS02645 0.85 -0.8 607,105 + PFLU_RS02645 0.85 +2.5 607,105 + PFLU_RS02645 0.85 -1.5 607,105 + PFLU_RS02645 0.85 -1.0 607,109 + PFLU_RS02645 0.86 -2.8 607,109 + PFLU_RS02645 0.86 +0.0 607,109 + PFLU_RS02645 0.86 -2.1 607,138 + PFLU_RS02645 0.89 -2.9 607,138 + PFLU_RS02645 0.89 -2.0 607,138 + PFLU_RS02645 0.89 -1.0 607,138 + PFLU_RS02645 0.89 -0.6 607,138 + PFLU_RS02645 0.89 -1.6 607,234 + +0.9 607,699 + +1.4 607,741 + +0.0 607,741 + +0.0 607,741 + +0.4 607,763 + +1.4 607,763 + +0.8 607,787 + +0.4 607,797 + -1.5
Or see this region's nucleotide sequence