Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5886

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
6,704,301	+		Pf6N2E2_5884	0.28	-2.4
6,704,301	+		Pf6N2E2_5884	0.28	-0.9
6,704,301	+		Pf6N2E2_5884	0.28	-0.3
6,704,301	+		Pf6N2E2_5884	0.28	-0.1
6,704,301	+		Pf6N2E2_5884	0.28	-0.5
6,704,301	+		Pf6N2E2_5884	0.28	-2.7
6,704,301	+		Pf6N2E2_5884	0.28	-2.2
6,704,301	+		Pf6N2E2_5884	0.28	-2.3
6,704,301	+		Pf6N2E2_5884	0.28	-2.6
6,704,301	+		Pf6N2E2_5884	0.28	-1.4
6,704,302	-		Pf6N2E2_5884	0.28	-1.8
6,704,302	-		Pf6N2E2_5884	0.28	-0.7
6,704,302	-		Pf6N2E2_5884	0.28	-1.6
6,704,302	-		Pf6N2E2_5884	0.28	-1.2
6,704,302	-		Pf6N2E2_5884	0.28	-2.0
6,704,302	-		Pf6N2E2_5884	0.28	-1.5
6,704,302	-		Pf6N2E2_5884	0.28	-1.0
6,704,302	-		Pf6N2E2_5884	0.28	-1.6
6,704,302	-		Pf6N2E2_5884	0.28	-0.1
6,704,302	-		Pf6N2E2_5884	0.28	-1.6
6,704,302	-		Pf6N2E2_5884	0.28	-0.2
6,704,302	-		Pf6N2E2_5884	0.28	-2.2
6,704,302	-		Pf6N2E2_5884	0.28	-2.2
6,704,302	-		Pf6N2E2_5884	0.28	-0.5
6,704,302	-		Pf6N2E2_5884	0.28	-0.7
6,704,429	-		Pf6N2E2_5884	0.43	-2.0
6,704,429	-		Pf6N2E2_5884	0.43	-0.1
6,704,429	-		Pf6N2E2_5884	0.43	-2.4
6,704,528	+		Pf6N2E2_5884	0.55	-2.0
6,704,528	+		Pf6N2E2_5884	0.55	-2.3
6,704,529	-		Pf6N2E2_5884	0.55	-1.8
6,704,529	-		Pf6N2E2_5884	0.55	-1.6
6,704,529	-		Pf6N2E2_5884	0.55	-0.7
6,704,727	+		Pf6N2E2_5884	0.79	+0.1
6,704,728	-		Pf6N2E2_5884	0.79	-2.7
6,704,728	-		Pf6N2E2_5884	0.79	-2.1
6,705,138	+				-0.5
6,705,138	+				+0.6
6,705,138	+				-0.1
6,705,139	-				+0.2
6,705,139	-				-0.8
6,705,139	-				-0.7
6,705,212	+		Pf6N2E2_5886	0.13	-0.5
6,705,213	-		Pf6N2E2_5886	0.14	-0.1
6,705,213	-		Pf6N2E2_5886	0.14	+1.0
6,705,213	-		Pf6N2E2_5886	0.14	-0.2
6,705,513	+		Pf6N2E2_5886	0.53	-0.6
6,705,513	+		Pf6N2E2_5886	0.53	-0.4
6,705,513	+		Pf6N2E2_5886	0.53	-0.6
6,705,513	+		Pf6N2E2_5886	0.53	-1.4
6,705,513	+		Pf6N2E2_5886	0.53	+1.3
6,705,513	+		Pf6N2E2_5886	0.53	-1.0
6,705,514	-		Pf6N2E2_5886	0.53	+0.5
6,705,514	-		Pf6N2E2_5886	0.53	-1.7
6,705,514	-		Pf6N2E2_5886	0.53	+0.1
6,705,514	-		Pf6N2E2_5886	0.53	-0.4
6,705,514	-		Pf6N2E2_5886	0.53	-2.4
6,705,747	+		Pf6N2E2_5886	0.84	-0.5
6,705,747	+		Pf6N2E2_5886	0.84	-0.5
6,705,747	+		Pf6N2E2_5886	0.84	-0.1
6,705,888	+				+0.3
6,705,889	-				+3.1
6,705,889	-				-0.5
6,705,933	+				+0.2
6,705,933	+				-1.0
6,705,933	+				+0.2
6,705,934	-				+0.0
6,706,008	+				+0.6
6,706,008	+				-1.3
6,706,009	-				+1.5
6,706,009	-				+1.5
6,706,009	-				+0.3
6,706,009	-				-0.2
6,706,009	-				+0.3
6,706,077	+				-0.6
6,706,078	-				+1.0
6,706,078	-				-0.4
6,706,078	-				+0.7
6,706,081	+				+0.8
6,706,081	+				+0.1
6,706,081	+				-0.3