Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5480

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
6,297,153	+				-0.2
6,297,360	-		Pf6N2E2_5479	0.20	-1.4
6,297,872	+		Pf6N2E2_5479	0.80	-1.0
6,297,872	+		Pf6N2E2_5479	0.80	+0.9
6,297,873	-		Pf6N2E2_5479	0.80	-0.6
6,297,873	-		Pf6N2E2_5479	0.80	+0.5
6,297,873	-		Pf6N2E2_5479	0.80	-1.0
6,297,873	-		Pf6N2E2_5479	0.80	+1.4
6,297,881	+		Pf6N2E2_5479	0.81	-0.3
6,297,881	+		Pf6N2E2_5479	0.81	+0.4
6,297,917	+		Pf6N2E2_5479	0.85	+1.4
6,297,917	+		Pf6N2E2_5479	0.85	+0.4
6,297,917	+		Pf6N2E2_5479	0.85	-0.3
6,297,917	+		Pf6N2E2_5479	0.85	-0.0
6,297,918	-		Pf6N2E2_5479	0.85	-0.6
6,297,918	-		Pf6N2E2_5479	0.85	+0.4
6,298,071	+				-0.7
6,298,648	+		Pf6N2E2_5480	0.56	-0.2
6,298,648	+		Pf6N2E2_5480	0.56	-1.2
6,298,648	+		Pf6N2E2_5480	0.56	+0.6
6,298,648	+		Pf6N2E2_5480	0.56	+0.2
6,298,648	+		Pf6N2E2_5480	0.56	-0.8
6,298,649	-		Pf6N2E2_5480	0.56	-0.4
6,298,649	-		Pf6N2E2_5480	0.56	-0.7
6,298,649	-		Pf6N2E2_5480	0.56	-1.1
6,298,649	-		Pf6N2E2_5480	0.56	+0.3
6,298,649	-		Pf6N2E2_5480	0.56	+0.4
6,298,722	-		Pf6N2E2_5480	0.63	-0.8
6,299,026	+				-0.1
6,299,026	+				-0.2
6,299,027	-				-0.1
6,299,027	-				-0.6
6,299,080	-				+0.6
6,299,200	+				-1.7
6,299,317	+		Pf6N2E2_5481	0.19	-0.6
6,299,317	+		Pf6N2E2_5481	0.19	+0.1
6,299,317	+		Pf6N2E2_5481	0.19	-0.8
6,299,528	-		Pf6N2E2_5481	0.42	+0.4
6,299,580	-		Pf6N2E2_5481	0.47	-0.2
6,299,641	+		Pf6N2E2_5481	0.54	+0.2
6,299,641	+		Pf6N2E2_5481	0.54	+0.2
6,299,642	-		Pf6N2E2_5481	0.54	+0.7
6,299,642	-		Pf6N2E2_5481	0.54	+0.1
6,299,642	-		Pf6N2E2_5481	0.54	+0.9
6,299,642	-		Pf6N2E2_5481	0.54	+0.4
6,299,671	-		Pf6N2E2_5481	0.57	+0.9
6,299,809	+		Pf6N2E2_5481	0.72	-1.3
6,299,824	+		Pf6N2E2_5481	0.74	+0.7
6,299,825	-		Pf6N2E2_5481	0.74	-0.9
6,299,825	-		Pf6N2E2_5481	0.74	+0.2
6,299,825	-		Pf6N2E2_5481	0.74	-1.6
6,299,825	-		Pf6N2E2_5481	0.74	+2.4
6,299,912	+		Pf6N2E2_5481	0.83	-0.5
6,299,913	-		Pf6N2E2_5481	0.83	-0.3
6,299,913	-		Pf6N2E2_5481	0.83	-0.1
6,299,962	+		Pf6N2E2_5481	0.88	+1.9
6,299,963	-		Pf6N2E2_5481	0.89	+0.0
6,299,963	-		Pf6N2E2_5481	0.89	-1.2
6,299,963	-		Pf6N2E2_5481	0.89	-0.2
6,300,028	+				+0.1
6,300,029	-				-0.6
6,300,029	-				+1.0
6,300,109	+				+1.0
6,300,109	+				+0.1
6,300,109	+				-0.3
6,300,110	-				+1.4
6,300,110	-				-1.6
6,300,110	-				-0.8