Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5394

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
6,199,205	+				-0.9
6,199,205	+				-0.9
6,199,205	+				-1.6
6,199,205	+				-0.2
6,199,206	-				+0.2
6,199,206	-				-0.3
6,199,332	-				-0.0
6,199,347	-				+0.4
6,199,347	-				+0.5
6,199,347	-				-0.1
6,199,347	-				-0.5
6,199,347	-				-1.1
6,199,353	+				+0.2
6,199,353	+				+0.2
6,199,354	-				+0.7
6,199,354	-				+1.4
6,199,354	-				+0.7
6,199,435	+				-0.2
6,199,435	+				+0.4
6,199,443	+				+0.5
6,199,443	+				-0.7
6,199,444	-				-1.0
6,199,469	-				-1.1
6,199,755	+		Pf6N2E2_5392	0.59	-0.1
6,199,844	+		Pf6N2E2_5392	0.78	-3.4
6,199,844	+		Pf6N2E2_5392	0.78	-1.4
6,199,844	+		Pf6N2E2_5392	0.78	+1.4
6,199,845	-		Pf6N2E2_5392	0.78	-2.3
6,199,845	-		Pf6N2E2_5392	0.78	-1.9
6,200,533	+		Pf6N2E2_5394	0.75	-3.5
6,200,533	+		Pf6N2E2_5394	0.75	-4.1
6,200,534	-		Pf6N2E2_5394	0.76	-4.9
6,200,534	-		Pf6N2E2_5394	0.76	-1.4
6,200,641	+				+1.4
6,200,641	+				+0.1
6,200,642	-				+2.0
6,200,642	-				-0.3
6,200,719	+				+0.1
6,200,719	+				-0.3
6,200,719	+				+1.3
6,200,719	+				-0.0
6,200,719	+				+0.3
6,200,720	-				-1.1
6,200,720	-				-0.1
6,200,720	-				-0.1
6,200,720	-				+0.3
6,200,720	-				+1.4
6,200,720	-				+1.4
6,200,832	+				+0.1
6,201,053	+		Pf6N2E2_5395	0.15	+2.4
6,201,053	+		Pf6N2E2_5395	0.15	+1.4
6,201,054	-		Pf6N2E2_5395	0.15	+2.4
6,201,054	-		Pf6N2E2_5395	0.15	+0.6
6,201,221	+		Pf6N2E2_5395	0.38	+0.9
6,201,221	+		Pf6N2E2_5395	0.38	-1.8
6,201,221	+		Pf6N2E2_5395	0.38	+0.4
6,201,222	-		Pf6N2E2_5395	0.38	-0.8
6,201,222	-		Pf6N2E2_5395	0.38	-0.9
6,201,222	-		Pf6N2E2_5395	0.38	+0.4
6,201,224	+		Pf6N2E2_5395	0.38	-0.4
6,201,224	+		Pf6N2E2_5395	0.38	+0.0
6,201,225	-		Pf6N2E2_5395	0.39	-0.7
6,201,225	-		Pf6N2E2_5395	0.39	+0.2
6,201,225	-		Pf6N2E2_5395	0.39	+0.1
6,201,225	-		Pf6N2E2_5395	0.39	-0.2
6,201,278	+		Pf6N2E2_5395	0.46	+0.4
6,201,278	+		Pf6N2E2_5395	0.46	-0.3
6,201,279	-		Pf6N2E2_5395	0.46	+1.4
6,201,279	-		Pf6N2E2_5395	0.46	+0.6
6,201,279	-		Pf6N2E2_5395	0.46	-0.5
6,201,380	+		Pf6N2E2_5395	0.60	-0.4
6,201,380	+		Pf6N2E2_5395	0.60	-0.4
6,201,381	-		Pf6N2E2_5395	0.60	-0.6
6,201,382	+		Pf6N2E2_5395	0.60	-0.9
6,201,382	+		Pf6N2E2_5395	0.60	-1.9
6,201,382	+		Pf6N2E2_5395	0.60	+0.3
6,201,382	+		Pf6N2E2_5395	0.60	+0.2
6,201,382	+		Pf6N2E2_5395	0.60	-0.7
6,201,382	+		Pf6N2E2_5395	0.60	+0.7
6,201,383	-		Pf6N2E2_5395	0.60	-0.1
6,201,383	-		Pf6N2E2_5395	0.60	-0.4
6,201,383	-		Pf6N2E2_5395	0.60	-0.2
6,201,383	-		Pf6N2E2_5395	0.60	+0.2
6,201,383	-		Pf6N2E2_5395	0.60	-0.4
6,201,383	-		Pf6N2E2_5395	0.60	+1.4
6,201,383	-		Pf6N2E2_5395	0.60	+1.4
6,201,383	-		Pf6N2E2_5395	0.60	-0.3
6,201,383	-		Pf6N2E2_5395	0.60	-1.1
6,201,401	+		Pf6N2E2_5395	0.62	-1.1
6,201,401	+		Pf6N2E2_5395	0.62	-0.1
6,201,401	+		Pf6N2E2_5395	0.62	-0.1
6,201,401	+		Pf6N2E2_5395	0.62	-0.0
6,201,401	+		Pf6N2E2_5395	0.62	+0.0
6,201,401	+		Pf6N2E2_5395	0.62	+1.4
6,201,491	+		Pf6N2E2_5395	0.75	-1.3
6,201,527	+		Pf6N2E2_5395	0.80	+0.2
6,201,528	-		Pf6N2E2_5395	0.80	-0.9
6,201,626	+				-0.6
6,201,626	+				-0.1
6,201,626	+				-0.3
6,201,626	+				-1.1