Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5308

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
6,101,391	+		Pf6N2E2_5306	0.71	+0.5
6,101,470	-		Pf6N2E2_5306	0.79	+1.2
6,101,474	+		Pf6N2E2_5306	0.80	-0.9
6,101,501	+		Pf6N2E2_5306	0.83	-0.0
6,101,502	-		Pf6N2E2_5306	0.83	+0.3
6,101,502	-		Pf6N2E2_5306	0.83	+1.9
6,101,502	-		Pf6N2E2_5306	0.83	+0.1
6,101,589	+				-0.5
6,101,589	+				-0.7
6,101,590	-				+0.5
6,101,590	-				+0.3
6,101,666	+				-1.7
6,101,667	-				+0.3
6,101,676	+				+0.2
6,101,676	+				+1.1
6,101,754	+		Pf6N2E2_5307	0.19	+0.3
6,101,955	-		Pf6N2E2_5307	0.60	+0.0
6,101,955	-		Pf6N2E2_5307	0.60	+0.8
6,101,955	-		Pf6N2E2_5307	0.60	-0.5
6,101,968	+		Pf6N2E2_5307	0.62	+0.5
6,101,968	+		Pf6N2E2_5307	0.62	+0.5
6,101,974	+		Pf6N2E2_5307	0.64	+1.8
6,101,974	+		Pf6N2E2_5307	0.64	+1.0
6,101,975	-		Pf6N2E2_5307	0.64	+1.3
6,101,975	-		Pf6N2E2_5307	0.64	+2.0
6,101,999	-		Pf6N2E2_5307	0.69	+0.2
6,101,999	-		Pf6N2E2_5307	0.69	-1.0
6,102,120	+				+0.5
6,102,121	-				-1.4
6,102,121	-				+1.5
6,102,121	-				+1.5
6,102,121	-				-0.9
6,102,121	-				-0.4
6,102,208	+				-0.1
6,102,222	+				+1.5
6,102,222	+				-0.3
6,102,222	+				+0.6
6,102,222	+				-1.5
6,102,223	-				+0.1
6,102,226	+				+0.7
6,102,303	+				-3.4
6,102,453	+		Pf6N2E2_5308	0.20	-3.4
6,102,453	+		Pf6N2E2_5308	0.20	-4.1
6,102,453	+		Pf6N2E2_5308	0.20	-3.8
6,102,453	+		Pf6N2E2_5308	0.20	-3.9
6,102,453	+		Pf6N2E2_5308	0.20	-2.5
6,102,453	+		Pf6N2E2_5308	0.20	-2.4
6,102,453	+		Pf6N2E2_5308	0.20	-2.0
6,102,453	+		Pf6N2E2_5308	0.20	-0.7
6,102,453	+		Pf6N2E2_5308	0.20	-2.8
6,102,453	+		Pf6N2E2_5308	0.20	-2.4
6,102,453	+		Pf6N2E2_5308	0.20	-2.4
6,102,453	+		Pf6N2E2_5308	0.20	-1.9
6,102,453	+		Pf6N2E2_5308	0.20	-1.8
6,102,453	+		Pf6N2E2_5308	0.20	-1.9
6,102,453	+		Pf6N2E2_5308	0.20	-1.9
6,102,454	-		Pf6N2E2_5308	0.20	-3.6
6,102,454	-		Pf6N2E2_5308	0.20	-3.6
6,102,454	-		Pf6N2E2_5308	0.20	-1.7
6,102,454	-		Pf6N2E2_5308	0.20	-3.0
6,102,454	-		Pf6N2E2_5308	0.20	-2.8
6,102,454	-		Pf6N2E2_5308	0.20	-3.9
6,102,454	-		Pf6N2E2_5308	0.20	-4.5
6,102,454	-		Pf6N2E2_5308	0.20	-3.4
6,102,454	-		Pf6N2E2_5308	0.20	-3.4
6,102,454	-		Pf6N2E2_5308	0.20	-4.2
6,102,454	-		Pf6N2E2_5308	0.20	-2.5
6,102,454	-		Pf6N2E2_5308	0.20	-2.9
6,102,454	-		Pf6N2E2_5308	0.20	-1.7
6,102,454	-		Pf6N2E2_5308	0.20	-3.7
6,102,504	+		Pf6N2E2_5308	0.25	-2.0
6,102,573	+		Pf6N2E2_5308	0.33	-3.9
6,102,573	+		Pf6N2E2_5308	0.33	-3.9
6,102,573	+		Pf6N2E2_5308	0.33	-1.0
6,102,574	-		Pf6N2E2_5308	0.33	-1.4
6,102,815	+		Pf6N2E2_5308	0.61	+1.5
6,102,815	+		Pf6N2E2_5308	0.61	-1.5
6,102,855	+		Pf6N2E2_5308	0.66	-1.7
6,102,855	+		Pf6N2E2_5308	0.66	-2.0
6,102,855	+		Pf6N2E2_5308	0.66	-2.6
6,102,856	-		Pf6N2E2_5308	0.66	-3.2
6,102,856	-		Pf6N2E2_5308	0.66	-3.7
6,102,856	-		Pf6N2E2_5308	0.66	-0.1
6,102,856	-		Pf6N2E2_5308	0.66	-2.9
6,102,856	-		Pf6N2E2_5308	0.66	-3.4
6,102,971	-		Pf6N2E2_5308	0.79	-2.4
6,102,990	+		Pf6N2E2_5308	0.81	-0.1
6,102,990	+		Pf6N2E2_5308	0.81	-1.1
6,102,990	+		Pf6N2E2_5308	0.81	-2.6
6,102,990	+		Pf6N2E2_5308	0.81	-1.5
6,102,990	+		Pf6N2E2_5308	0.81	-2.8
6,103,003	+		Pf6N2E2_5308	0.82	-3.0
6,103,003	+		Pf6N2E2_5308	0.82	-1.9
6,103,004	-		Pf6N2E2_5308	0.83	-3.0
6,103,004	-		Pf6N2E2_5308	0.83	-2.8
6,103,004	-		Pf6N2E2_5308	0.83	+1.5
6,103,023	+		Pf6N2E2_5308	0.85	-1.6
6,103,136	+				-1.3
6,103,136	+				-2.1
6,103,182	+				-0.5
6,103,182	+				-0.6
6,103,182	+				+1.5
6,103,183	-				+0.1
6,103,183	-				+0.5
6,103,183	-				+0.6
6,103,183	-				+0.6
6,103,183	-				-0.9
6,103,183	-				+0.0
6,103,234	-				-2.5
6,103,308	+				-1.3
6,103,308	+				-4.2
6,103,308	+				-3.4
6,103,308	+				-1.6
6,103,308	+				-3.1
6,103,309	-				-2.9
6,103,309	-				+0.5
6,103,317	-				-3.9
6,103,518	-		Pf6N2E2_5309	0.25	-1.5
6,103,518	-		Pf6N2E2_5309	0.25	-2.6
6,103,854	+		Pf6N2E2_5309	0.62	-2.5
6,103,855	-		Pf6N2E2_5309	0.62	-5.0
6,103,927	-		Pf6N2E2_5309	0.70	-1.9
6,103,944	+		Pf6N2E2_5309	0.72	-3.8
6,103,944	+		Pf6N2E2_5309	0.72	-4.5
6,103,944	+		Pf6N2E2_5309	0.72	-2.1
6,103,945	-		Pf6N2E2_5309	0.72	-3.4
6,104,025	+		Pf6N2E2_5309	0.81	-4.3