Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5220

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
6,018,043	-		Pf6N2E2_5219	0.77	+1.4
6,018,043	-		Pf6N2E2_5219	0.77	+1.0
6,018,043	-		Pf6N2E2_5219	0.77	-0.5
6,018,043	-		Pf6N2E2_5219	0.77	-1.5
6,018,043	-		Pf6N2E2_5219	0.77	+1.5
6,018,043	-		Pf6N2E2_5219	0.77	+1.5
6,018,043	-		Pf6N2E2_5219	0.77	+0.6
6,018,043	-		Pf6N2E2_5219	0.77	+1.5
6,018,061	-		Pf6N2E2_5219	0.78	+1.7
6,018,175	-		Pf6N2E2_5219	0.84	+1.6
6,018,241	-		Pf6N2E2_5219	0.88	-0.0
6,018,241	-		Pf6N2E2_5219	0.88	+1.1
6,018,241	-		Pf6N2E2_5219	0.88	+1.5
6,018,241	-		Pf6N2E2_5219	0.88	+0.8
6,018,241	-		Pf6N2E2_5219	0.88	-0.4
6,018,331	-				+1.2
6,018,455	-				+1.3
6,018,455	-				-1.1
6,018,455	-				+0.6
6,018,455	-				+1.0
6,018,455	-				-0.1
6,018,455	-				+2.1
6,018,455	-				+2.2
6,018,455	-				+1.5
6,018,461	-				+1.4
6,018,461	-				+0.5
6,018,461	-				-0.6
6,018,463	-				-0.4
6,018,463	-				-0.3
6,018,463	-				+0.9
6,018,463	-				+1.7
6,018,521	+				+1.1
6,018,538	+				-0.1
6,018,539	-				-0.3
6,018,539	-				-0.5
6,018,592	+				+1.0
6,018,592	+				+1.6
6,018,618	+				+1.0