Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4814

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
5,566,006	+		Pf6N2E2_4813	0.70	-1.2
5,566,006	+		Pf6N2E2_4813	0.70	-3.4
5,566,007	-		Pf6N2E2_4813	0.70	-1.2
5,566,007	-		Pf6N2E2_4813	0.70	-2.0
5,566,007	-		Pf6N2E2_4813	0.70	-2.1
5,566,007	-		Pf6N2E2_4813	0.70	-1.5
5,566,007	-		Pf6N2E2_4813	0.70	-2.5
5,566,007	-		Pf6N2E2_4813	0.70	-2.5
5,566,007	-		Pf6N2E2_4813	0.70	-2.2
5,566,191	-		Pf6N2E2_4813	0.78	-1.3
5,566,191	-		Pf6N2E2_4813	0.78	-2.6
5,566,191	-		Pf6N2E2_4813	0.78	-2.1
5,566,191	-		Pf6N2E2_4813	0.78	-1.4
5,566,191	-		Pf6N2E2_4813	0.78	-0.6
5,566,251	+		Pf6N2E2_4813	0.80	-1.1
5,566,251	+		Pf6N2E2_4813	0.80	-1.2
5,566,251	+		Pf6N2E2_4813	0.80	-3.9
5,566,251	+		Pf6N2E2_4813	0.80	+0.4
5,566,252	-		Pf6N2E2_4813	0.80	+0.4
5,566,252	-		Pf6N2E2_4813	0.80	-2.8
5,566,254	+		Pf6N2E2_4813	0.80	-3.6
5,566,254	+		Pf6N2E2_4813	0.80	-4.1
5,566,254	+		Pf6N2E2_4813	0.80	-4.7
5,566,255	-		Pf6N2E2_4813	0.80	-3.5
5,566,255	-		Pf6N2E2_4813	0.80	-1.1
5,566,255	-		Pf6N2E2_4813	0.80	-1.4
5,566,255	-		Pf6N2E2_4813	0.80	-2.4
5,566,255	-		Pf6N2E2_4813	0.80	-3.6
5,566,255	-		Pf6N2E2_4813	0.80	-2.9
5,566,383	+		Pf6N2E2_4813	0.86	-3.4
5,566,509	+				-3.3
5,566,509	+				-3.7
5,566,510	-				-1.3
5,566,510	-				-0.2
5,566,514	+				+0.4
5,566,514	+				-2.2
5,566,515	-				-0.9
5,566,515	-				-2.0
5,566,515	-				-3.3
5,566,574	+				-3.4
5,566,575	-				-1.2
5,566,582	-				+0.5
5,566,590	+				-1.6
5,566,788	+				-0.7
5,566,788	+				+0.2
5,566,788	+				+0.5
5,566,788	+				-0.2
5,566,788	+				-0.0
5,566,788	+				+0.0
5,566,788	+				-0.5
5,566,788	+				-1.6
5,566,788	+				-0.7
5,566,789	-				+0.4
5,566,789	-				+0.4
5,566,789	-				+1.4
5,566,789	-				-0.6
5,566,789	-				-0.3
5,566,789	-				-1.0
5,566,789	-				-0.4
5,566,789	-				+1.4
5,566,789	-				-0.2
5,566,789	-				-2.2
5,566,789	-				+0.5
5,566,789	-				-0.2
5,566,789	-				+0.4
5,566,789	-				+0.6
5,566,789	-				-0.1
5,566,794	+				-0.2
5,566,794	+				+1.4
5,566,794	+				+1.1
5,566,794	+				-0.7
5,566,794	+				+0.6
5,566,794	+				+0.3
5,566,794	+				-1.2
5,566,794	+				-0.7
5,566,794	+				-0.8
5,566,794	+				-0.3
5,566,794	+				+0.5
5,566,794	+				-1.0
5,566,794	+				+0.2
5,566,794	+				-0.0
5,566,794	+				-0.2
5,566,795	-				-0.1
5,566,795	-				-0.6
5,566,795	-				+0.7
5,566,795	-				+1.4
5,566,795	-				+0.4
5,566,795	-				-0.1
5,566,795	-				-0.6
5,566,795	-				-0.1
5,566,795	-				-1.1
5,566,795	-				+0.4
5,566,795	-				-1.1
5,566,861	+				+1.4
5,566,861	+				-0.6
5,566,861	+				+0.2
5,566,861	+				-1.0
5,566,939	+		Pf6N2E2_4814	0.14	+0.5
5,567,220	+		Pf6N2E2_4814	0.59	-0.9
5,567,220	+		Pf6N2E2_4814	0.59	-0.0
5,567,220	+		Pf6N2E2_4814	0.59	-0.6
5,567,220	+		Pf6N2E2_4814	0.59	+2.7
5,567,220	+		Pf6N2E2_4814	0.59	+0.6
5,567,221	-		Pf6N2E2_4814	0.59	-0.5
5,567,221	-		Pf6N2E2_4814	0.59	-0.2
5,567,221	-		Pf6N2E2_4814	0.59	+1.4
5,567,221	-		Pf6N2E2_4814	0.59	+0.1
5,567,221	-		Pf6N2E2_4814	0.59	-0.2
5,567,399	+		Pf6N2E2_4814	0.87	+0.1
5,567,399	+		Pf6N2E2_4814	0.87	-0.5
5,567,400	-		Pf6N2E2_4814	0.87	+0.6
5,567,454	+				+0.1
5,567,454	+				-0.3
5,567,455	-				-0.3
5,567,455	-				+0.1
5,567,455	-				-0.5
5,567,455	-				+1.4
5,567,455	-				-1.2
5,567,455	-				-0.9
5,567,478	+				-0.4
5,567,479	-				-0.5
5,567,491	+				-0.1
5,567,492	-				+0.6
5,567,541	+				-0.0
5,567,541	+				-0.6
5,567,558	-				+0.5
5,567,606	+				+0.4
5,567,682	+				-0.5
5,567,682	+				-0.6
5,567,683	-				-0.4
5,567,704	-				-0.4
5,567,786	+				+1.4
5,567,786	+				+0.8
5,567,787	-				+0.5
5,567,813	+				+0.1
5,567,813	+				-0.5
5,567,813	+				+0.2
5,567,829	-				+0.4
5,567,898	+				+1.4
5,567,899	-				-0.6
5,567,899	-				-0.7
5,567,899	-				+0.6
5,568,114	+		Pf6N2E2_4815	0.25	-1.1
5,568,114	+		Pf6N2E2_4815	0.25	+0.1
5,568,114	+		Pf6N2E2_4815	0.25	+0.0
5,568,115	-		Pf6N2E2_4815	0.25	-1.0
5,568,296	-		Pf6N2E2_4815	0.42	-2.2
5,568,429	+		Pf6N2E2_4815	0.53	-0.4
5,568,429	+		Pf6N2E2_4815	0.53	+0.6
5,568,429	+		Pf6N2E2_4815	0.53	-1.3
5,568,429	+		Pf6N2E2_4815	0.53	+0.1
5,568,429	+		Pf6N2E2_4815	0.53	-0.9
5,568,429	+		Pf6N2E2_4815	0.53	-0.4
5,568,429	+		Pf6N2E2_4815	0.53	-0.4
5,568,429	+		Pf6N2E2_4815	0.53	-0.0
5,568,430	-		Pf6N2E2_4815	0.53	-1.8
5,568,430	-		Pf6N2E2_4815	0.53	+0.4
5,568,430	-		Pf6N2E2_4815	0.53	+1.4