Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3326

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
3,846,514	+				-0.5
3,846,702	+				-1.2
3,846,743	-				-1.4
3,846,810	+				-0.4
3,846,811	-				+1.4
3,846,846	-				+2.4
3,846,846	-				+1.4
3,846,868	+				+1.4
3,846,916	+				+0.0
3,846,916	+				-0.1
3,846,917	-				+0.4
3,847,065	+				+0.3
3,847,066	-				-0.1
3,847,066	-				+1.1
3,847,079	-				-0.2
3,847,131	+				-0.1
3,847,230	+				-2.2
3,847,230	+				-0.3
3,847,230	+				+1.7
3,847,231	-				+0.8
3,847,231	-				-0.0
3,847,231	-				+0.2
3,847,231	-				-0.2
3,847,231	-				-0.7
3,847,231	-				-0.0
3,847,231	-				-0.1
3,847,231	-				-0.4
3,847,231	-				+0.0
3,847,370	+		Pf6N2E2_3326	0.54	-1.3
3,847,370	+		Pf6N2E2_3326	0.54	-2.2
3,847,475	+				+0.4
3,847,475	+				-0.7
3,847,475	+				-0.5
3,847,476	-				-0.8
3,847,490	-				-0.4
3,847,572	+				-0.5
3,847,572	+				+0.0
3,847,573	-				-0.4
3,847,625	+				+0.2
3,847,626	-				+0.2
3,847,626	-				+0.6
3,847,626	-				-0.4
3,847,632	+				+0.3
3,847,633	-				-0.3
3,847,647	+				-1.4
3,847,647	+				-0.4
3,847,648	-				+0.4
3,847,648	-				+0.1
3,847,702	+				+0.3
3,847,702	+				-0.5
3,847,703	-				-1.2
3,847,703	-				+1.4
3,847,766	-				+0.0
3,847,839	+				-0.9
3,847,840	-				-0.2