Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3039

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
3,523,698	-				-1.2
3,523,704	-				+0.5
3,523,704	-				-2.6
3,523,704	-				+0.1
3,523,704	-				-0.7
3,523,704	-				-0.8
3,523,704	-				-0.3
3,523,706	-				+1.5
3,523,706	-				-0.0
3,523,728	-				+1.1
3,523,842	-				-0.2
3,523,844	-				-0.4
3,523,844	-				+0.3
3,523,844	-				-1.3
3,523,844	-				-0.5
3,524,055	+		Pf6N2E2_3039	0.30	-2.0
3,524,056	-		Pf6N2E2_3039	0.30	-1.2
3,524,157	-		Pf6N2E2_3039	0.45	-0.0
3,524,298	+		Pf6N2E2_3039	0.66	-2.8
3,524,298	+		Pf6N2E2_3039	0.66	-2.2
3,524,298	+		Pf6N2E2_3039	0.66	-2.5
3,524,298	+		Pf6N2E2_3039	0.66	-0.6
3,524,298	+		Pf6N2E2_3039	0.66	-2.6
3,524,298	+		Pf6N2E2_3039	0.66	-2.0
3,524,298	+		Pf6N2E2_3039	0.66	-1.6
3,524,298	+		Pf6N2E2_3039	0.66	-2.2
3,524,298	+		Pf6N2E2_3039	0.66	-0.9
3,524,298	+		Pf6N2E2_3039	0.66	+1.5
3,524,299	-		Pf6N2E2_3039	0.66	-0.8
3,524,299	-		Pf6N2E2_3039	0.66	-1.8
3,524,299	-		Pf6N2E2_3039	0.66	+0.5
3,524,299	-		Pf6N2E2_3039	0.66	-0.1
3,524,299	-		Pf6N2E2_3039	0.66	-1.3
3,524,299	-		Pf6N2E2_3039	0.66	-1.7
3,524,299	-		Pf6N2E2_3039	0.66	-1.8
3,524,299	-		Pf6N2E2_3039	0.66	-0.7
3,524,396	-		Pf6N2E2_3039	0.81	-0.1
3,524,442	+		Pf6N2E2_3039	0.87	-0.9
3,524,443	-		Pf6N2E2_3039	0.87	-2.1
3,524,580	+				-1.4
3,524,581	-				-1.2
3,524,612	+		Pf6N2E2_3040	0.11	-2.5
3,524,612	+		Pf6N2E2_3040	0.11	-2.8
3,524,612	+		Pf6N2E2_3040	0.11	-1.1
3,524,612	+		Pf6N2E2_3040	0.11	-0.8
3,524,612	+		Pf6N2E2_3040	0.11	-1.3
3,524,612	+		Pf6N2E2_3040	0.11	-1.8
3,524,612	+		Pf6N2E2_3040	0.11	-1.1
3,524,612	+		Pf6N2E2_3040	0.11	-0.4
3,524,613	-		Pf6N2E2_3040	0.11	-0.3
3,524,613	-		Pf6N2E2_3040	0.11	-0.6
3,524,613	-		Pf6N2E2_3040	0.11	+0.4
3,524,613	-		Pf6N2E2_3040	0.11	+0.3
3,524,613	-		Pf6N2E2_3040	0.11	+0.5
3,524,613	-		Pf6N2E2_3040	0.11	+0.6
3,524,613	-		Pf6N2E2_3040	0.11	+0.5
3,524,613	-		Pf6N2E2_3040	0.11	+0.2
3,524,613	-		Pf6N2E2_3040	0.11	-0.0
3,524,972	+		Pf6N2E2_3040	0.59	-2.4
3,524,973	-		Pf6N2E2_3040	0.59	-1.6
3,524,973	-		Pf6N2E2_3040	0.59	+0.2
3,525,009	+		Pf6N2E2_3040	0.64	-0.6
3,525,082	-		Pf6N2E2_3040	0.74	+0.4
3,525,113	+		Pf6N2E2_3040	0.78	-3.2
3,525,219	-				-0.1
3,525,219	-				-0.4
3,525,270	+				-1.5
3,525,270	+				-0.8
3,525,271	-				+0.2
3,525,271	-				-0.1
3,525,326	-				+0.3
3,525,453	+		Pf6N2E2_3041	0.18	-0.2
3,525,454	-		Pf6N2E2_3041	0.18	-1.5
3,525,454	-		Pf6N2E2_3041	0.18	-2.1