Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2564

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
3,021,723	+				-0.6
3,021,724	-				+0.2
3,021,928	+				-0.7
3,021,928	+				-0.0
3,021,928	+				+0.1
3,022,001	+				+0.4
3,022,001	+				+1.2
3,022,001	+				-0.5
3,022,001	+				+1.2
3,022,001	+				+0.7
3,022,002	-				+0.4
3,022,002	-				-0.1
3,022,002	-				+1.0
3,022,302	+		Pf6N2E2_2563	0.81	+0.6
3,022,302	+		Pf6N2E2_2563	0.81	+0.5
3,022,302	+		Pf6N2E2_2563	0.81	+0.1
3,022,302	+		Pf6N2E2_2563	0.81	+1.3
3,022,302	+		Pf6N2E2_2563	0.81	+1.0
3,022,302	+		Pf6N2E2_2563	0.81	+1.5
3,022,302	+		Pf6N2E2_2563	0.81	+1.1
3,022,302	+		Pf6N2E2_2563	0.81	+0.1
3,022,303	-		Pf6N2E2_2563	0.81	+1.0
3,022,303	-		Pf6N2E2_2563	0.81	+1.0
3,022,303	-		Pf6N2E2_2563	0.81	+0.9
3,022,303	-		Pf6N2E2_2563	0.81	+0.9
3,022,303	-		Pf6N2E2_2563	0.81	+1.2
3,022,303	-		Pf6N2E2_2563	0.81	+0.7
3,022,303	-		Pf6N2E2_2563	0.81	+1.1
3,022,303	-		Pf6N2E2_2563	0.81	+2.5
3,022,303	-		Pf6N2E2_2563	0.81	+1.1
3,022,303	-		Pf6N2E2_2563	0.81	+0.6
3,022,303	-		Pf6N2E2_2563	0.81	+0.9
3,022,303	-		Pf6N2E2_2563	0.81	+0.7
3,022,303	-		Pf6N2E2_2563	0.81	+1.2
3,022,303	-		Pf6N2E2_2563	0.81	+0.6
3,022,303	-		Pf6N2E2_2563	0.81	+0.7
3,022,303	-		Pf6N2E2_2563	0.81	+0.9
3,022,303	-		Pf6N2E2_2563	0.81	+1.0
3,022,303	-		Pf6N2E2_2563	0.81	+0.7
3,022,303	-		Pf6N2E2_2563	0.81	+0.4
3,022,303	-		Pf6N2E2_2563	0.81	+0.9
3,022,303	-		Pf6N2E2_2563	0.81	+1.8
3,022,303	-		Pf6N2E2_2563	0.81	-0.4
3,022,303	-		Pf6N2E2_2563	0.81	-0.7
3,022,303	-		Pf6N2E2_2563	0.81	+1.5
3,022,303	-		Pf6N2E2_2563	0.81	-1.7
3,022,303	-		Pf6N2E2_2563	0.81	+0.9
3,022,303	-		Pf6N2E2_2563	0.81	+1.3
3,022,303	-		Pf6N2E2_2563	0.81	+0.8
3,022,303	-		Pf6N2E2_2563	0.81	+1.0
3,022,304	+		Pf6N2E2_2563	0.82	-0.7
3,022,304	+		Pf6N2E2_2563	0.82	+1.3
3,022,304	+		Pf6N2E2_2563	0.82	+0.8
3,022,304	+		Pf6N2E2_2563	0.82	+1.0
3,022,305	-		Pf6N2E2_2563	0.82	+0.7
3,022,305	-		Pf6N2E2_2563	0.82	+0.4
3,022,305	-		Pf6N2E2_2563	0.82	+1.3
3,022,305	-		Pf6N2E2_2563	0.82	+0.7
3,022,305	-		Pf6N2E2_2563	0.82	+1.7
3,022,306	+		Pf6N2E2_2563	0.82	+0.9
3,022,306	+		Pf6N2E2_2563	0.82	+1.5
3,022,306	+		Pf6N2E2_2563	0.82	+0.5
3,022,306	+		Pf6N2E2_2563	0.82	-0.4
3,022,307	-		Pf6N2E2_2563	0.82	+0.3
3,022,307	-		Pf6N2E2_2563	0.82	+0.8
3,022,307	-		Pf6N2E2_2563	0.82	+1.5
3,022,307	-		Pf6N2E2_2563	0.82	+0.5
3,022,363	-				+0.9
3,022,363	-				+0.8
3,022,363	-				+0.3
3,022,384	-				+0.7
3,022,384	-				-1.3
3,022,384	-				+1.0
3,022,539	-		Pf6N2E2_2564	0.33	-3.1
3,022,706	+		Pf6N2E2_2564	0.67	-0.5
3,022,707	-		Pf6N2E2_2564	0.68	-0.8
3,022,707	-		Pf6N2E2_2564	0.68	-0.9
3,022,741	-		Pf6N2E2_2564	0.75	+0.1
3,022,742	+		Pf6N2E2_2564	0.75	-1.5
3,022,742	+		Pf6N2E2_2564	0.75	+0.2
3,022,781	+		Pf6N2E2_2564	0.83	-1.9
3,022,781	+		Pf6N2E2_2564	0.83	-1.1
3,022,782	-		Pf6N2E2_2564	0.83	-1.5
3,022,782	-		Pf6N2E2_2564	0.83	-1.3
3,022,854	+				-0.1
3,022,854	+				+0.1
3,022,863	+				-1.4
3,022,864	-				-0.1
3,022,900	+				-0.9
3,022,900	+				-1.8
3,022,900	+				-0.4
3,022,900	+				-0.5
3,022,900	+				-1.1
3,022,900	+				-2.2
3,022,901	-				+0.4
3,022,901	-				-1.1
3,022,901	-				-0.1
3,022,937	+				-0.3
3,022,937	+				-0.8
3,023,037	+		Pf6N2E2_2565	0.11	+0.0
3,023,037	+		Pf6N2E2_2565	0.11	-0.5
3,023,037	+		Pf6N2E2_2565	0.11	-1.3
3,023,037	+		Pf6N2E2_2565	0.11	+0.9
3,023,037	+		Pf6N2E2_2565	0.11	-0.2
3,023,037	+		Pf6N2E2_2565	0.11	+0.2
3,023,037	+		Pf6N2E2_2565	0.11	+0.1
3,023,037	+		Pf6N2E2_2565	0.11	-1.4
3,023,037	+		Pf6N2E2_2565	0.11	-1.2
3,023,037	+		Pf6N2E2_2565	0.11	-0.8
3,023,037	+		Pf6N2E2_2565	0.11	+0.1
3,023,037	+		Pf6N2E2_2565	0.11	-0.4
3,023,038	-		Pf6N2E2_2565	0.11	-0.1
3,023,038	-		Pf6N2E2_2565	0.11	-1.2
3,023,038	-		Pf6N2E2_2565	0.11	-1.0
3,023,038	-		Pf6N2E2_2565	0.11	+0.5
3,023,038	-		Pf6N2E2_2565	0.11	+0.0
3,023,038	-		Pf6N2E2_2565	0.11	+0.0
3,023,038	-		Pf6N2E2_2565	0.11	+0.4
3,023,038	-		Pf6N2E2_2565	0.11	+0.1
3,023,038	-		Pf6N2E2_2565	0.11	-1.7
3,023,052	+		Pf6N2E2_2565	0.12	-0.4
3,023,157	-		Pf6N2E2_2565	0.24	+0.3
3,023,177	+		Pf6N2E2_2565	0.26	-0.6
3,023,177	+		Pf6N2E2_2565	0.26	-0.3
3,023,178	-		Pf6N2E2_2565	0.26	-0.2
3,023,178	-		Pf6N2E2_2565	0.26	-0.8
3,023,606	-		Pf6N2E2_2565	0.71	+2.5
3,023,760	-		Pf6N2E2_2565	0.88	+0.1
3,023,760	-		Pf6N2E2_2565	0.88	+0.0
3,023,798	-				-0.1
3,023,811	+				-2.0