Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2510

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
2,961,113	+				-0.8
2,961,114	-				+2.5
2,961,217	-		Pf6N2E2_2509	0.29	-2.4
2,961,342	-		Pf6N2E2_2509	0.54	-0.9
2,961,632	-				-3.0
2,961,873	-				-2.2
2,961,972	-				+0.5
2,962,002	+				+0.5
2,962,042	-				-0.7
2,962,256	+		Pf6N2E2_2510	0.18	+1.5
2,962,258	+		Pf6N2E2_2510	0.18	+1.5
2,962,262	-		Pf6N2E2_2510	0.18	+1.5
2,962,364	+		Pf6N2E2_2510	0.27	-3.1
2,962,365	-		Pf6N2E2_2510	0.27	+1.5
2,962,365	-		Pf6N2E2_2510	0.27	-1.1
2,962,370	-		Pf6N2E2_2510	0.28	+0.5
2,962,370	-		Pf6N2E2_2510	0.28	-1.1
2,962,386	-		Pf6N2E2_2510	0.29	-0.5
2,962,449	-		Pf6N2E2_2510	0.35	-0.1
2,962,449	-		Pf6N2E2_2510	0.35	+1.5
2,962,678	+		Pf6N2E2_2510	0.55	-2.1
2,962,678	+		Pf6N2E2_2510	0.55	-0.1
2,962,679	-		Pf6N2E2_2510	0.55	+0.5
2,962,778	-		Pf6N2E2_2510	0.64	+1.5
2,963,202	-				-0.4