Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2452

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
2,902,809	-				+1.0
2,903,019	-				+1.5
2,903,062	+				-0.3
2,903,191	-				+0.1
2,903,482	-				-0.1
2,903,679	+		Pf6N2E2_2452	0.23	+1.5
2,903,680	-		Pf6N2E2_2452	0.23	+0.2
2,903,680	-		Pf6N2E2_2452	0.23	-0.1
2,903,827	+		Pf6N2E2_2452	0.43	-0.9
2,903,830	-		Pf6N2E2_2452	0.43	-0.5
2,903,901	+		Pf6N2E2_2452	0.53	+0.3
2,903,901	+		Pf6N2E2_2452	0.53	-0.4
2,903,901	+		Pf6N2E2_2452	0.53	+1.5
2,903,902	-		Pf6N2E2_2452	0.53	-1.1
2,903,902	-		Pf6N2E2_2452	0.53	+1.5
2,903,902	-		Pf6N2E2_2452	0.53	+1.1
2,903,931	+		Pf6N2E2_2452	0.56	+0.6
2,904,022	+		Pf6N2E2_2452	0.69	+0.2
2,904,023	-		Pf6N2E2_2452	0.69	+0.3
2,904,023	-		Pf6N2E2_2452	0.69	-1.3
2,904,023	-		Pf6N2E2_2452	0.69	+0.9
2,904,097	+		Pf6N2E2_2452	0.78	-0.1
2,904,099	+		Pf6N2E2_2452	0.79	+1.1
2,904,099	+		Pf6N2E2_2452	0.79	+1.5
2,904,099	+		Pf6N2E2_2452	0.79	+1.1
2,904,099	+		Pf6N2E2_2452	0.79	-0.6
2,904,099	+		Pf6N2E2_2452	0.79	-0.3
2,904,099	+		Pf6N2E2_2452	0.79	+0.2
2,904,100	-		Pf6N2E2_2452	0.79	-0.1
2,904,100	-		Pf6N2E2_2452	0.79	+0.2
2,904,100	-		Pf6N2E2_2452	0.79	-0.3
2,904,100	-		Pf6N2E2_2452	0.79	-1.0
2,904,100	-		Pf6N2E2_2452	0.79	+0.1
2,904,106	-		Pf6N2E2_2452	0.80	-0.3
2,904,352	+				-0.1
2,904,353	-				+0.0
2,904,363	+				-0.3
2,904,391	+				+0.7
2,904,392	-				+1.5
2,904,874	-		Pf6N2E2_2453	0.35	-0.2
2,904,874	-		Pf6N2E2_2453	0.35	-0.1
2,904,996	+		Pf6N2E2_2453	0.44	+0.4
2,905,119	+		Pf6N2E2_2453	0.53	-3.0
2,905,120	-		Pf6N2E2_2453	0.53	+0.0
2,905,162	-		Pf6N2E2_2453	0.57	-0.1
2,905,164	+		Pf6N2E2_2453	0.57	-0.6
2,905,164	+		Pf6N2E2_2453	0.57	-0.5
2,905,164	+		Pf6N2E2_2453	0.57	-0.1
2,905,165	-		Pf6N2E2_2453	0.57	+0.1