Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2292

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
2,711,429	-				+0.1
2,711,429	-				+0.9
2,711,429	-				+2.5
2,711,480	-				-0.8
2,711,527	-				-2.3
2,711,664	-				-1.1
2,711,664	-				+0.4
2,711,692	+				-2.3
2,711,692	+				-0.0
2,711,692	+				+0.2
2,711,692	+				+0.3
2,711,692	+				-0.3
2,711,692	+				-1.4
2,711,692	+				+0.2
2,711,692	+				-1.3
2,711,693	-				-0.3
2,711,693	-				-1.0
2,711,693	-				-0.1
2,711,693	-				-0.7
2,711,693	-				-0.8
2,711,693	-				+0.3
2,711,696	+				-0.0
2,711,696	+				-0.0
2,711,696	+				+0.1
2,711,696	+				+0.2
2,711,696	+				+0.1
2,711,696	+				-0.3
2,711,696	+				-0.5
2,711,697	-				-0.4
2,711,697	-				-1.2
2,711,697	-				-1.2
2,711,697	-				+0.8
2,711,697	-				-1.1
2,711,697	-				+0.3
2,711,697	-				-0.7
2,711,697	-				-0.4
2,711,702	+				+0.4
2,711,703	-				-1.0
2,711,703	-				+0.0
2,711,711	+				-0.1
2,711,711	+				-0.7
2,711,711	+				-1.1
2,711,711	+				-0.5
2,711,711	+				-1.1
2,711,716	-				+1.5
2,711,758	+				-1.3
2,711,800	+				+1.5
2,711,877	+				+0.5
2,711,877	+				-2.1
2,711,878	-				+1.5
2,711,986	+		Pf6N2E2_2291	0.29	+1.5
2,712,086	-		Pf6N2E2_2291	0.58	+1.5
2,712,279	+				+1.5
2,712,280	-				+0.5
2,712,321	-				+0.3
2,712,326	+				+1.5
2,712,388	+				+1.5
2,712,388	+				+0.3
2,712,388	+				-0.1
2,712,388	+				-1.7
2,712,388	+				-1.8
2,712,388	+				-0.1
2,712,388	+				-0.8
2,712,388	+				+0.3
2,712,388	+				-0.5
2,712,388	+				-0.1
2,712,389	-				-1.6
2,712,389	-				+1.5
2,712,389	-				+0.5
2,712,389	-				-0.9
2,712,389	-				-1.2
2,712,389	-				-1.4
2,712,389	-				-1.5
2,712,392	+				-0.2
2,712,393	-				+1.5
2,712,426	+				+0.5
2,712,426	+				-0.8
2,712,426	+				+2.5
2,712,426	+				-1.3
2,712,426	+				+0.1
2,712,427	-				-0.1
2,712,427	-				-1.8
2,712,427	-				+0.3
2,712,429	+				-0.8
2,712,429	+				-0.6
2,712,429	+				-0.2
2,712,429	+				-0.5
2,712,429	+				-0.9
2,712,430	-				-1.3
2,712,430	-				-0.8
2,712,430	-				+0.1
2,712,430	-				-0.3
2,712,430	-				+1.5
2,712,430	-				-0.6
2,712,537	-		Pf6N2E2_2292	0.26	-0.9
2,712,652	-		Pf6N2E2_2292	0.52	+0.1
2,712,652	-		Pf6N2E2_2292	0.52	-1.2
2,712,652	-		Pf6N2E2_2292	0.52	+1.5
2,712,687	+		Pf6N2E2_2292	0.60	-1.1
2,712,688	-		Pf6N2E2_2292	0.60	-1.7
2,713,100	+				-0.5
2,713,101	-				+0.2
2,713,101	-				-1.8
2,713,130	-				+0.4
2,713,199	+		Pf6N2E2_2293	0.11	+1.5
2,713,199	+		Pf6N2E2_2293	0.11	-0.4
2,713,200	-		Pf6N2E2_2293	0.11	-2.2
2,713,200	-		Pf6N2E2_2293	0.11	-1.0
2,713,200	-		Pf6N2E2_2293	0.11	+0.4
2,713,200	-		Pf6N2E2_2293	0.11	-0.0
2,713,647	-		Pf6N2E2_2293	0.34	+0.3
2,713,757	+		Pf6N2E2_2293	0.40	-2.7