Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2059

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
2,447,323	+		Pf6N2E2_2057	0.84	-0.2
2,447,323	+		Pf6N2E2_2057	0.84	-0.2
2,447,323	+		Pf6N2E2_2057	0.84	+0.8
2,447,517	+				+0.1
2,447,517	+				+1.2
2,447,537	-				+1.6
2,447,577	+				-1.4
2,447,616	+				+0.4
2,447,616	+				-0.9
2,447,617	-				-0.2
2,447,617	-				+0.9
2,447,617	-				+0.5
2,447,617	-				-0.2
2,447,635	+				+1.6
2,447,635	+				+1.6
2,447,635	+				+0.4
2,447,636	-				-0.2
2,447,636	-				+0.4
2,447,662	+				-1.4
2,447,663	-				-1.3
2,447,663	-				+1.6
2,447,671	-				+0.6
2,448,306	-				+2.0
2,449,001	+		Pf6N2E2_2059	0.69	-1.2
2,449,001	+		Pf6N2E2_2059	0.69	-0.7
2,449,002	-		Pf6N2E2_2059	0.69	+0.6
2,449,002	-		Pf6N2E2_2059	0.69	+1.6
2,449,652	+				-0.7
2,449,653	-				-1.4
2,449,653	-				+0.6
2,449,673	+				-0.6
2,449,673	+				+0.6
2,449,757	+				-0.1
2,449,758	-				+1.2
2,449,880	+		Pf6N2E2_2060	0.11	+0.4
2,449,880	+		Pf6N2E2_2060	0.11	+1.6
2,449,881	-		Pf6N2E2_2060	0.11	-0.6
2,449,881	-		Pf6N2E2_2060	0.11	-0.6
2,449,943	+		Pf6N2E2_2060	0.12	+0.4
2,449,943	+		Pf6N2E2_2060	0.12	+0.0
2,449,943	+		Pf6N2E2_2060	0.12	+0.3
2,449,943	+		Pf6N2E2_2060	0.12	+0.2
2,449,943	+		Pf6N2E2_2060	0.12	-0.1
2,449,944	-		Pf6N2E2_2060	0.12	-2.0
2,449,944	-		Pf6N2E2_2060	0.12	-1.9
2,449,946	+		Pf6N2E2_2060	0.12	-0.4
2,449,947	-		Pf6N2E2_2060	0.12	+1.6