Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1745

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
2,057,821	+		Pf6N2E2_1744	0.38	+0.2
2,057,821	+		Pf6N2E2_1744	0.38	+0.7
2,058,116	-		Pf6N2E2_1744	0.66	-0.9
2,058,185	-		Pf6N2E2_1744	0.73	+1.6
2,058,238	+		Pf6N2E2_1744	0.78	+1.6
2,058,253	+		Pf6N2E2_1744	0.79	-0.2
2,058,253	+		Pf6N2E2_1744	0.79	-0.0
2,058,253	+		Pf6N2E2_1744	0.79	-0.2
2,058,466	+				-0.4
2,058,467	-				+0.6
2,058,540	-				-0.7
2,058,640	-				+0.7
2,058,640	-				-0.3
2,058,696	-				-0.0
2,058,737	-		Pf6N2E2_1745	0.11	-0.3
2,058,828	-		Pf6N2E2_1745	0.18	+1.6
2,059,048	-		Pf6N2E2_1745	0.37	-1.2
2,059,119	+		Pf6N2E2_1745	0.43	+1.6
2,059,150	+		Pf6N2E2_1745	0.46	-0.3
2,059,151	-		Pf6N2E2_1745	0.46	-0.4
2,059,151	-		Pf6N2E2_1745	0.46	-0.3
2,059,399	-		Pf6N2E2_1745	0.67	-0.4
2,059,447	-		Pf6N2E2_1745	0.71	+0.7
2,059,447	-		Pf6N2E2_1745	0.71	-0.1
2,059,533	+		Pf6N2E2_1745	0.78	+1.2
2,059,534	-		Pf6N2E2_1745	0.78	+1.0
2,059,600	-		Pf6N2E2_1745	0.84	+1.6
2,059,603	-		Pf6N2E2_1745	0.84	-1.2
2,059,665	+		Pf6N2E2_1745	0.89	+0.2
2,059,666	-		Pf6N2E2_1745	0.89	-0.4
2,059,740	+				-1.1
2,059,740	+				-1.3
2,059,740	+				+0.2
2,059,791	+				+0.6
2,059,873	+				+1.0
2,059,873	+				-2.2
2,059,907	+		Pf6N2E2_1746	0.12	-0.6
2,059,907	+		Pf6N2E2_1746	0.12	+0.4
2,059,969	-		Pf6N2E2_1746	0.20	-0.6
2,060,116	+		Pf6N2E2_1746	0.38	-1.4
2,060,117	-		Pf6N2E2_1746	0.38	+0.8
2,060,175	+		Pf6N2E2_1746	0.45	-0.2
2,060,175	+		Pf6N2E2_1746	0.45	+0.8
2,060,175	+		Pf6N2E2_1746	0.45	-0.9
2,060,176	-		Pf6N2E2_1746	0.45	-1.0
2,060,701	+				+0.6
2,060,701	+				+1.3
2,060,701	+				+1.6
2,060,702	-				+0.5
2,060,778	-		Pf6N2E2_1747	0.11	+0.1