Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1744

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
2,056,444	-		Pf6N2E2_1743	0.26	-0.4
2,056,714	-		Pf6N2E2_1743	0.50	-0.4
2,056,758	+		Pf6N2E2_1743	0.54	-0.7
2,057,248	+				+1.3
2,057,248	+				-0.7
2,057,249	-				+0.5
2,057,249	-				-0.0
2,057,288	+				+1.6
2,057,289	-				+0.1
2,057,289	-				-0.4
2,057,348	+				-0.8
2,057,348	+				+1.2
2,057,387	+				+0.2
2,057,388	-				+0.1
2,057,388	-				+0.6
2,057,388	-				-1.2
2,057,471	+				-0.0
2,057,471	+				+0.8
2,057,472	-				+0.6
2,057,605	+		Pf6N2E2_1744	0.18	-0.8
2,057,605	+		Pf6N2E2_1744	0.18	+1.0
2,057,606	-		Pf6N2E2_1744	0.18	+0.4
2,057,821	+		Pf6N2E2_1744	0.38	+0.2
2,057,821	+		Pf6N2E2_1744	0.38	+0.7
2,058,116	-		Pf6N2E2_1744	0.66	-0.9
2,058,185	-		Pf6N2E2_1744	0.73	+1.6
2,058,238	+		Pf6N2E2_1744	0.78	+1.6
2,058,253	+		Pf6N2E2_1744	0.79	-0.2
2,058,253	+		Pf6N2E2_1744	0.79	-0.0
2,058,253	+		Pf6N2E2_1744	0.79	-0.2
2,058,466	+				-0.4
2,058,467	-				+0.6
2,058,540	-				-0.7
2,058,640	-				+0.7
2,058,640	-				-0.3
2,058,696	-				-0.0
2,058,737	-		Pf6N2E2_1745	0.11	-0.3
2,058,828	-		Pf6N2E2_1745	0.18	+1.6
2,059,048	-		Pf6N2E2_1745	0.37	-1.2
2,059,119	+		Pf6N2E2_1745	0.43	+1.6
2,059,150	+		Pf6N2E2_1745	0.46	-0.3
2,059,151	-		Pf6N2E2_1745	0.46	-0.4
2,059,151	-		Pf6N2E2_1745	0.46	-0.3
2,059,399	-		Pf6N2E2_1745	0.67	-0.4
2,059,447	-		Pf6N2E2_1745	0.71	+0.7
2,059,447	-		Pf6N2E2_1745	0.71	-0.1