Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1673

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
1,978,063	+				+0.6
1,978,063	+				-0.2
1,978,067	+				+0.8
1,978,067	+				+0.4
1,978,068	-				+0.6
1,978,068	-				+0.0
1,978,092	+				+0.1
1,978,093	-				-0.4
1,978,143	+				+0.1
1,978,143	+				+0.2
1,978,144	-				-1.2
1,978,144	-				-0.9
1,978,144	-				-0.9
1,978,154	+				+0.1
1,978,155	-				+2.6
1,978,155	-				+1.6
1,978,174	+				+1.1
1,978,191	+				+0.6
1,978,254	+		Pf6N2E2_1672	0.11	-0.1
1,978,408	-		Pf6N2E2_1672	0.28	+0.4
1,978,435	-		Pf6N2E2_1672	0.31	-0.7
1,978,435	-		Pf6N2E2_1672	0.31	+0.1
1,978,435	-		Pf6N2E2_1672	0.31	-1.4
1,978,435	-		Pf6N2E2_1672	0.31	-0.3
1,978,521	+		Pf6N2E2_1672	0.41	+0.6
1,978,540	-		Pf6N2E2_1672	0.43	+1.1
1,978,614	+		Pf6N2E2_1672	0.51	+0.3
1,978,615	-		Pf6N2E2_1672	0.51	-0.0
1,978,615	-		Pf6N2E2_1672	0.51	-0.0
1,978,615	-		Pf6N2E2_1672	0.51	-0.3
1,978,615	-		Pf6N2E2_1672	0.51	-0.7
1,978,622	+		Pf6N2E2_1672	0.52	+0.1
1,978,623	-		Pf6N2E2_1672	0.52	+1.0
1,978,623	-		Pf6N2E2_1672	0.52	-0.6
1,978,623	-		Pf6N2E2_1672	0.52	-0.3
1,978,623	-		Pf6N2E2_1672	0.52	+0.6
1,978,623	-		Pf6N2E2_1672	0.52	-0.6
1,978,623	-		Pf6N2E2_1672	0.52	-0.0
1,978,642	-		Pf6N2E2_1672	0.55	+0.6
1,978,642	-		Pf6N2E2_1672	0.55	-0.6
1,978,732	+		Pf6N2E2_1672	0.65	-0.8
1,978,733	-		Pf6N2E2_1672	0.65	-0.8
1,978,780	+		Pf6N2E2_1672	0.70	+0.2
1,978,780	+		Pf6N2E2_1672	0.70	-0.0
1,978,780	+		Pf6N2E2_1672	0.70	-0.1
1,978,830	+		Pf6N2E2_1672	0.76	+0.2
1,978,831	-		Pf6N2E2_1672	0.76	-1.0
1,978,906	+		Pf6N2E2_1672	0.84	-1.2
1,978,907	-		Pf6N2E2_1672	0.85	+2.6
1,979,040	+				-0.4
1,979,040	+				-0.2
1,979,227	-		Pf6N2E2_1673	0.38	-2.2
1,979,227	-		Pf6N2E2_1673	0.38	+1.6
1,979,446	-		Pf6N2E2_1673	0.88	-0.6
1,979,483	+				-0.0
1,979,484	-				-1.8
1,979,525	+				-0.4
1,979,526	-				-0.3
1,979,598	+				-2.3
1,979,599	-				-0.2
1,979,599	-				+1.6
1,979,599	-				-0.4
1,979,599	-				-0.2
1,979,608	+				-2.1
1,979,609	-				-1.3
1,979,688	+				-0.7
1,979,689	-				-0.4
1,979,778	+				+0.6
1,979,781	-				+1.3
1,979,781	-				-0.3
1,979,785	-				-0.3
1,979,785	-				-0.1
1,979,785	-				-0.5
1,979,787	-				+0.5
1,979,787	-				+0.6
1,979,828	+				-0.9
1,979,829	-				+0.4
1,979,829	-				-1.2
1,979,829	-				+1.6
1,979,842	-				-0.1
1,979,849	+				-1.3
1,979,849	+				+0.0
1,979,850	-				+0.6
1,979,910	+				-0.4
1,979,910	+				-0.8
1,979,914	+				-0.4
1,979,937	+				+1.6
1,979,986	+				+0.6
1,980,008	+				-2.2
1,980,043	+				-0.4
1,980,103	+				-0.4
1,980,103	+				-0.1
1,980,103	+				-0.2
1,980,103	+				-1.0
1,980,103	+				-2.1
1,980,103	+				-0.2
1,980,104	-				+1.4
1,980,113	+				-0.1
1,980,113	+				-0.7
1,980,113	+				+0.0
1,980,113	+				+1.6
1,980,113	+				+1.7
1,980,113	+				+0.3
1,980,114	-				-0.7
1,980,118	+				-1.0
1,980,132	+				-1.3
1,980,211	+				+0.0
1,980,211	+				+0.1
1,980,269	+		Pf6N2E2_1674	0.15	+1.6
1,980,269	+		Pf6N2E2_1674	0.15	+0.4
1,980,269	+		Pf6N2E2_1674	0.15	+0.3
1,980,360	+		Pf6N2E2_1674	0.23	-0.7
1,980,360	+		Pf6N2E2_1674	0.23	+1.6
1,980,360	+		Pf6N2E2_1674	0.23	-1.3
1,980,361	-		Pf6N2E2_1674	0.23	+1.6
1,980,477	+		Pf6N2E2_1674	0.34	+0.3
1,980,487	+		Pf6N2E2_1674	0.35	-0.9