Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1425

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
1,672,151	+				+0.7
1,672,170	-				-1.8
1,672,170	-				+0.7
1,672,307	+				-0.3
1,672,389	+				-1.0
1,672,390	-				+0.6
1,672,390	-				+0.6
1,672,569	-		Pf6N2E2_1424	0.25	-0.2
1,672,686	-		Pf6N2E2_1424	0.44	-0.6
1,672,994	-				+1.4
1,673,147	+				+0.0
1,673,148	-				-0.2
1,673,182	+				+0.1
1,673,182	+				-0.3
1,673,182	+				-0.5
1,673,183	-				-1.5
1,673,184	+				+0.2
1,673,184	+				-0.7
1,673,184	+				-0.3
1,673,184	+				-0.6
1,673,184	+				+0.8
1,673,184	+				-0.7
1,673,184	+				+0.0
1,673,184	+				+1.1
1,673,184	+				-1.2
1,673,184	+				-0.3
1,673,184	+				-0.2
1,673,185	-				+0.8
1,673,185	-				-1.6
1,673,185	-				-0.0
1,673,185	-				-0.7
1,673,185	-				-0.6
1,673,185	-				-0.3
1,673,185	-				+0.8
1,673,185	-				-1.6
1,673,185	-				-0.5
1,673,185	-				-0.6
1,673,185	-				-0.0
1,673,185	-				-0.4
1,673,298	+		Pf6N2E2_1425	0.20	+1.6
1,673,298	+		Pf6N2E2_1425	0.20	-0.1
1,673,298	+		Pf6N2E2_1425	0.20	+0.0
1,673,299	-		Pf6N2E2_1425	0.20	+1.6
1,673,299	-		Pf6N2E2_1425	0.20	+1.6
1,673,313	+		Pf6N2E2_1425	0.21	+1.6
1,673,523	+		Pf6N2E2_1425	0.40	+1.3
1,673,524	-		Pf6N2E2_1425	0.40	-0.8
1,673,684	-		Pf6N2E2_1425	0.55	-0.8
1,673,713	+		Pf6N2E2_1425	0.58	+1.1
1,673,714	-		Pf6N2E2_1425	0.58	+1.6
1,673,714	-		Pf6N2E2_1425	0.58	+1.6
1,673,761	+		Pf6N2E2_1425	0.62	+1.6
1,673,763	+		Pf6N2E2_1425	0.62	-0.1
1,673,763	+		Pf6N2E2_1425	0.62	-1.2
1,674,085	+				+1.0
1,674,088	-				-0.4
1,674,222	+				+2.6
1,674,223	-				-0.4
1,674,223	-				-2.6
1,674,223	-				+0.6
1,674,231	+				+0.6
1,674,240	+				+0.3
1,674,314	-				-0.2
1,674,315	+				-0.6
1,674,315	+				-2.7
1,674,316	-				+0.5
1,674,366	-		Pf6N2E2_1426	0.11	-0.8
1,674,366	-		Pf6N2E2_1426	0.11	+0.1
1,674,366	-		Pf6N2E2_1426	0.11	-1.7
1,674,366	-		Pf6N2E2_1426	0.11	-1.2
1,674,366	-		Pf6N2E2_1426	0.11	-0.2
1,674,411	+		Pf6N2E2_1426	0.14	-0.5
1,674,438	+		Pf6N2E2_1426	0.16	-0.7
1,674,438	+		Pf6N2E2_1426	0.16	+0.6
1,674,439	-		Pf6N2E2_1426	0.16	-0.9
1,674,519	-		Pf6N2E2_1426	0.22	+1.6
1,674,525	+		Pf6N2E2_1426	0.23	+0.1
1,674,819	+		Pf6N2E2_1426	0.45	-0.7
1,674,819	+		Pf6N2E2_1426	0.45	-0.8
1,674,820	-		Pf6N2E2_1426	0.45	-0.5
1,674,820	-		Pf6N2E2_1426	0.45	+0.6
1,674,820	-		Pf6N2E2_1426	0.45	+0.5
1,674,924	+		Pf6N2E2_1426	0.53	-1.5
1,674,924	+		Pf6N2E2_1426	0.53	-0.6
1,674,925	-		Pf6N2E2_1426	0.53	+0.8
1,674,925	-		Pf6N2E2_1426	0.53	-1.0
1,674,925	-		Pf6N2E2_1426	0.53	-0.6
1,675,125	+		Pf6N2E2_1426	0.68	+1.6
1,675,125	+		Pf6N2E2_1426	0.68	-1.6
1,675,125	+		Pf6N2E2_1426	0.68	+1.0
1,675,126	-		Pf6N2E2_1426	0.68	-0.2
1,675,126	-		Pf6N2E2_1426	0.68	-0.7
1,675,176	+		Pf6N2E2_1426	0.71	+2.6
1,675,176	+		Pf6N2E2_1426	0.71	-0.9
1,675,177	-		Pf6N2E2_1426	0.71	+0.2