Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1405

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
1,644,213	+				+1.0
1,644,213	+				-0.4
1,644,214	-				-1.7
1,644,214	-				+0.0
1,644,214	-				-0.3
1,644,314	+				+0.3
1,644,315	-				-1.0
1,644,603	+		Pf6N2E2_1404	0.42	-0.4
1,644,603	+		Pf6N2E2_1404	0.42	-0.6
1,644,604	-		Pf6N2E2_1404	0.42	-0.4
1,644,604	-		Pf6N2E2_1404	0.42	-1.8
1,644,810	+		Pf6N2E2_1404	0.67	-0.0
1,644,865	-		Pf6N2E2_1404	0.73	-0.2
1,645,087	+				-0.7
1,645,121	+				-0.1
1,645,121	+				+0.9
1,645,121	+				+0.6
1,645,121	+				-0.1
1,645,121	+				+0.1
1,645,121	+				+0.1
1,645,121	+				+0.6
1,645,121	+				+1.6
1,645,122	-				-0.5
1,645,122	-				-1.0
1,645,122	-				+1.9
1,645,122	-				-0.8
1,645,122	-				+0.7
1,645,122	-				-0.8
1,645,122	-				+1.3
1,645,206	+		Pf6N2E2_1405	0.13	+0.6
1,645,207	-		Pf6N2E2_1405	0.13	-1.8
1,645,499	+		Pf6N2E2_1405	0.45	-0.6
1,645,499	+		Pf6N2E2_1405	0.45	+0.0
1,645,500	-		Pf6N2E2_1405	0.45	-0.5
1,645,616	+		Pf6N2E2_1405	0.58	-0.3
1,645,617	-		Pf6N2E2_1405	0.58	+1.0
1,645,617	-		Pf6N2E2_1405	0.58	+0.6
1,645,745	+		Pf6N2E2_1405	0.72	-0.6
1,645,745	+		Pf6N2E2_1405	0.72	-0.5
1,645,770	-				+1.6
1,645,965	-				-0.0
1,645,965	-				+1.3
1,646,165	-		Pf6N2E2_1406	0.13	+0.1
1,646,260	+		Pf6N2E2_1406	0.20	-1.4
1,646,261	-		Pf6N2E2_1406	0.20	-0.5
1,646,261	-		Pf6N2E2_1406	0.20	+0.6
1,646,308	+		Pf6N2E2_1406	0.24	+0.0
1,646,309	-		Pf6N2E2_1406	0.24	-0.9
1,646,309	-		Pf6N2E2_1406	0.24	-1.6
1,646,309	-		Pf6N2E2_1406	0.24	-0.7
1,646,441	-		Pf6N2E2_1406	0.34	-0.5
1,646,536	+		Pf6N2E2_1406	0.41	-0.6
1,646,536	+		Pf6N2E2_1406	0.41	-1.6
1,646,536	+		Pf6N2E2_1406	0.41	+0.4
1,646,537	-		Pf6N2E2_1406	0.41	+0.6
1,646,537	-		Pf6N2E2_1406	0.41	+0.3
1,646,545	+		Pf6N2E2_1406	0.42	+0.1
1,646,545	+		Pf6N2E2_1406	0.42	+0.2
1,646,545	+		Pf6N2E2_1406	0.42	-1.4
1,646,545	+		Pf6N2E2_1406	0.42	-0.4
1,646,545	+		Pf6N2E2_1406	0.42	+0.5
1,646,545	+		Pf6N2E2_1406	0.42	-1.3
1,646,640	-		Pf6N2E2_1406	0.49	+0.0
1,646,686	+		Pf6N2E2_1406	0.52	+0.4
1,646,686	+		Pf6N2E2_1406	0.52	+0.1
1,646,686	+		Pf6N2E2_1406	0.52	-1.0
1,646,686	+		Pf6N2E2_1406	0.52	-0.4
1,646,686	+		Pf6N2E2_1406	0.52	+1.0
1,646,686	+		Pf6N2E2_1406	0.52	-1.0
1,646,687	-		Pf6N2E2_1406	0.52	+0.3
1,646,687	-		Pf6N2E2_1406	0.52	+1.6
1,646,755	+		Pf6N2E2_1406	0.58	-0.6
1,646,755	+		Pf6N2E2_1406	0.58	-0.1
1,646,755	+		Pf6N2E2_1406	0.58	+0.3
1,646,756	-		Pf6N2E2_1406	0.58	-0.4
1,646,756	-		Pf6N2E2_1406	0.58	-1.3
1,646,809	-		Pf6N2E2_1406	0.62	-0.6
1,646,815	+		Pf6N2E2_1406	0.62	+0.6