Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1296

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
1,530,385	+		Pf6N2E2_1295	0.32	-3.0
1,530,433	+		Pf6N2E2_1295	0.36	-3.2
1,530,434	-		Pf6N2E2_1295	0.36	-2.5
1,530,434	-		Pf6N2E2_1295	0.36	-3.2
1,530,593	+		Pf6N2E2_1295	0.47	-0.4
1,530,593	+		Pf6N2E2_1295	0.47	+0.1
1,530,670	-		Pf6N2E2_1295	0.53	-0.4
1,531,164	-		Pf6N2E2_1295	0.89	-1.9
1,531,605	-		Pf6N2E2_1296	0.42	-3.2
1,531,605	-		Pf6N2E2_1296	0.42	-1.5
1,531,613	+		Pf6N2E2_1296	0.43	+1.6
1,531,619	+		Pf6N2E2_1296	0.44	-2.4
1,531,620	-		Pf6N2E2_1296	0.44	-2.5
1,531,659	+		Pf6N2E2_1296	0.50	+0.6
1,531,660	-		Pf6N2E2_1296	0.51	-2.9
1,531,727	+		Pf6N2E2_1296	0.61	-2.7
1,531,727	+		Pf6N2E2_1296	0.61	-2.2
1,531,727	+		Pf6N2E2_1296	0.61	-2.1
1,531,727	+		Pf6N2E2_1296	0.61	-2.4
1,531,728	-		Pf6N2E2_1296	0.61	-2.1
1,531,941	-				-2.1
1,532,025	+				+0.4
1,532,096	+				-0.1
1,532,944	+				+1.6
1,532,945	-				-1.5
1,532,953	-				-0.1
1,532,953	-				+1.2