Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1294

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
1,526,652	+		Pf6N2E2_1292	0.79	+0.2
1,526,652	+		Pf6N2E2_1292	0.79	-0.5
1,526,652	+		Pf6N2E2_1292	0.79	+0.1
1,526,653	-		Pf6N2E2_1292	0.79	+0.1
1,526,653	-		Pf6N2E2_1292	0.79	+0.2
1,526,653	-		Pf6N2E2_1292	0.79	-0.7
1,526,664	+		Pf6N2E2_1292	0.80	+0.3
1,526,763	+		Pf6N2E2_1292	0.85	+0.4
1,526,911	-				+1.1
1,526,911	-				+0.3
1,526,911	-				+2.0
1,526,950	+				-1.5
1,526,950	+				+0.7
1,527,053	+				-0.3
1,527,053	+				-0.9
1,527,053	+				-1.5
1,527,053	+				-0.1
1,527,053	+				+0.4
1,527,053	+				+0.5
1,527,525	+		Pf6N2E2_1293	0.84	-3.7
1,527,529	+		Pf6N2E2_1293	0.86	-2.5
1,527,529	+		Pf6N2E2_1293	0.86	-0.6
1,528,461	+		Pf6N2E2_1294	0.43	-2.4
1,528,789	-		Pf6N2E2_1294	0.59	-2.1
1,528,993	+		Pf6N2E2_1294	0.69	-3.2
1,529,475	+				-2.2
1,529,496	+				-2.4
1,529,678	-				-0.9
1,529,678	-				+1.4
1,529,678	-				-2.5
1,529,730	+				-3.5
1,529,731	-				-1.8
1,529,731	-				-0.9
1,529,731	-				+1.5
1,529,742	+				-2.4
1,529,743	-				-0.5
1,529,743	-				-3.4
1,529,745	+				+0.6
1,529,746	-				+0.6
1,529,748	+				-3.0
1,529,748	+				-0.8
1,529,748	+				-2.1
1,529,748	+				-1.3
1,529,748	+				-3.2
1,529,749	-				-0.9
1,529,752	+				-2.7
1,529,752	+				-0.7
1,529,752	+				-2.3
1,529,752	+				-2.0
1,529,753	-				-0.9
1,529,753	-				+0.6
1,529,753	-				+0.1
1,529,753	-				-0.2
1,529,753	-				-0.5
1,529,803	+				-0.6
1,529,815	+				-0.5
1,529,816	-				+0.6
1,529,876	+				+0.2
1,529,876	+				+0.4
1,529,900	+				+0.3
1,529,901	-				+1.6
1,529,901	-				+0.3
1,529,901	-				+0.1
1,529,942	+				+1.6
1,529,942	+				-0.2
1,529,942	+				+0.1
1,529,942	+				-0.7
1,529,942	+				+1.6
1,529,943	-				-0.9
1,529,943	-				+1.6
1,529,943	-				+0.6
1,529,943	-				+0.3
1,529,943	-				-1.7
1,530,112	+		Pf6N2E2_1295	0.12	-3.0
1,530,112	+		Pf6N2E2_1295	0.12	+0.4
1,530,113	-		Pf6N2E2_1295	0.12	+1.6
1,530,222	-				-0.4
1,530,242	-		Pf6N2E2_1295	0.22	+1.6
1,530,299	-		Pf6N2E2_1295	0.26	-1.7
1,530,309	+		Pf6N2E2_1295	0.27	-1.7
1,530,385	+		Pf6N2E2_1295	0.32	-3.0
1,530,433	+		Pf6N2E2_1295	0.36	-3.2
1,530,434	-		Pf6N2E2_1295	0.36	-2.5
1,530,434	-		Pf6N2E2_1295	0.36	-3.2
1,530,593	+		Pf6N2E2_1295	0.47	-0.4
1,530,593	+		Pf6N2E2_1295	0.47	+0.1