Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00535

Experiment: rhizosphere EcoFAB sample 3; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rhizosphere EcoFAB sample 3; outgrowth in LB
108,910	-				-0.1
108,932	+				-0.3
108,991	+				-1.4
108,991	+				+0.7
108,991	+				-2.3
108,999	-				-1.9
108,999	-				-1.0
108,999	-				+1.9
109,048	+		BWI76_RS00530	0.13	+1.0
109,054	+		BWI76_RS00530	0.14	-3.1
109,060	+		BWI76_RS00530	0.15	-2.1
109,062	-		BWI76_RS00530	0.15	-2.1
109,065	+		BWI76_RS00530	0.15	-0.6
109,065	+		BWI76_RS00530	0.15	-3.6
109,065	+		BWI76_RS00530	0.15	-1.7
109,066	+		BWI76_RS00530	0.15	-2.8
109,068	-		BWI76_RS00530	0.15	-2.0
109,068	-		BWI76_RS00530	0.15	+0.1
109,068	-		BWI76_RS00530	0.15	-2.4
109,068	-		BWI76_RS00530	0.15	-2.1
109,068	-		BWI76_RS00530	0.15	-0.9
109,073	-		BWI76_RS00530	0.16	+0.7
109,073	-		BWI76_RS00530	0.16	-2.9
109,073	-		BWI76_RS00530	0.16	+3.0
109,073	-		BWI76_RS00530	0.16	-1.4
109,074	-		BWI76_RS00530	0.16	-1.3
109,092	+		BWI76_RS00530	0.18	-0.6
109,092	+		BWI76_RS00530	0.18	+2.0
109,092	+		BWI76_RS00530	0.18	-0.7
109,092	+		BWI76_RS00530	0.18	+1.0
109,092	+		BWI76_RS00530	0.18	-0.1
109,092	+		BWI76_RS00530	0.18	-2.1
109,092	+		BWI76_RS00530	0.18	-0.6
109,092	+		BWI76_RS00530	0.18	-0.1
109,092	+		BWI76_RS00530	0.18	+0.2
109,092	+		BWI76_RS00530	0.18	-0.9
109,092	+		BWI76_RS00530	0.18	-1.2
109,092	+		BWI76_RS00530	0.18	-2.1
109,092	+		BWI76_RS00530	0.18	-2.5
109,092	+		BWI76_RS00530	0.18	+0.4
109,100	-		BWI76_RS00530	0.19	-2.2
109,100	-		BWI76_RS00530	0.19	+1.0
109,100	-		BWI76_RS00530	0.19	-1.5
109,100	-		BWI76_RS00530	0.19	-1.6
109,100	-		BWI76_RS00530	0.19	-2.1
109,100	-		BWI76_RS00530	0.19	+0.3
109,100	-				+0.4
109,100	-		BWI76_RS00530	0.19	-2.8
109,100	-		BWI76_RS00530	0.19	-2.5
109,100	-		BWI76_RS00530	0.19	-2.2
109,100	-		BWI76_RS00530	0.19	-2.2
109,100	-				+0.6
109,100	-		BWI76_RS00530	0.19	+1.4
109,100	-		BWI76_RS00530	0.19	-1.5
109,102	+		BWI76_RS00530	0.19	+3.0
109,104	+		BWI76_RS00530	0.19	-1.4
109,110	+		BWI76_RS00530	0.20	+0.1
109,110	+		BWI76_RS00530	0.20	+3.6
109,110	+		BWI76_RS00530	0.20	-1.6
109,110	+		BWI76_RS00530	0.20	-1.2
109,110	+		BWI76_RS00530	0.20	+0.4
109,110	+		BWI76_RS00530	0.20	-1.3
109,113	-		BWI76_RS00530	0.20	-0.2
109,113	-		BWI76_RS00530	0.20	+0.2
109,118	-		BWI76_RS00530	0.20	-1.6
109,118	-		BWI76_RS00530	0.20	-2.4
109,118	-		BWI76_RS00530	0.20	+0.2
109,118	-		BWI76_RS00530	0.20	-2.3
109,118	-		BWI76_RS00530	0.20	-1.1
109,122	+		BWI76_RS00530	0.21	+1.2
109,125	+		BWI76_RS00530	0.21	-0.2
109,125	+		BWI76_RS00530	0.21	-0.5
109,125	+		BWI76_RS00530	0.21	-0.9
109,133	-		BWI76_RS00530	0.22	-0.6
109,133	-		BWI76_RS00530	0.22	+2.1
109,133	-		BWI76_RS00530	0.22	+1.4
109,182	+		BWI76_RS00530	0.27	+0.4
109,190	-		BWI76_RS00530	0.28	+0.4
109,195	+		BWI76_RS00530	0.28	-3.6
109,195	+		BWI76_RS00530	0.28	+0.3
109,195	+		BWI76_RS00530	0.28	-0.6
109,195	+		BWI76_RS00530	0.28	-1.5
109,203	-		BWI76_RS00530	0.29	-2.5
109,203	-		BWI76_RS00530	0.29	+0.6
109,203	-		BWI76_RS00530	0.29	-0.4
109,203	-		BWI76_RS00530	0.29	+1.9
109,212	+		BWI76_RS00530	0.30	-0.6
109,217	+		BWI76_RS00530	0.31	-1.1
109,236	-		BWI76_RS00530	0.33	-1.8
109,253	+		BWI76_RS00530	0.34	+0.2
109,260	+		BWI76_RS00530	0.35	-0.7
109,260	+		BWI76_RS00530	0.35	-2.5
109,260	+		BWI76_RS00530	0.35	-2.0
109,268	-		BWI76_RS00530	0.36	-0.4
109,271	+		BWI76_RS00530	0.36	-2.8
109,277	+		BWI76_RS00530	0.37	-1.3
109,279	-		BWI76_RS00530	0.37	-1.9
109,292	+		BWI76_RS00530	0.38	-1.0
109,292	+		BWI76_RS00530	0.38	+1.8
109,292	+		BWI76_RS00530	0.38	-0.5
109,292	+		BWI76_RS00530	0.38	-0.4
109,292	+		BWI76_RS00530	0.38	+1.0
109,292	+		BWI76_RS00530	0.38	-2.1
109,292	+		BWI76_RS00530	0.38	-1.4
109,292	+		BWI76_RS00530	0.38	+2.1
109,292	+		BWI76_RS00530	0.38	-1.6
109,294	+		BWI76_RS00530	0.38	-1.6
109,294	+		BWI76_RS00530	0.38	+0.2
109,297	-				+1.9
109,300	-		BWI76_RS00530	0.39	-0.6
109,300	-		BWI76_RS00530	0.39	+0.5
109,300	-		BWI76_RS00530	0.39	-0.8
109,300	-		BWI76_RS00530	0.39	-0.1
109,300	-		BWI76_RS00530	0.39	-0.7
109,300	-		BWI76_RS00530	0.39	-0.5
109,300	-		BWI76_RS00530	0.39	+0.2
109,300	-		BWI76_RS00530	0.39	-0.7
109,300	-		BWI76_RS00530	0.39	+0.6
109,300	-		BWI76_RS00530	0.39	-0.2
109,302	-		BWI76_RS00530	0.39	+1.2
109,302	-		BWI76_RS00530	0.39	-0.9
109,302	-		BWI76_RS00530	0.39	+0.6
109,302	-		BWI76_RS00530	0.39	+0.3
109,302	-		BWI76_RS00530	0.39	-0.8
109,304	+		BWI76_RS00530	0.39	-0.1
109,304	+		BWI76_RS00530	0.39	+0.8
109,307	-		BWI76_RS00530	0.40	-2.7
109,314	-		BWI76_RS00530	0.40	-2.2
109,337	-		BWI76_RS00530	0.43	-0.3
109,368	-		BWI76_RS00530	0.46	-0.5
109,377	+		BWI76_RS00530	0.47	-0.5
109,382	+		BWI76_RS00530	0.47	-0.3
109,382	+		BWI76_RS00530	0.47	-1.2
109,382	+		BWI76_RS00530	0.47	-3.0
109,382	+		BWI76_RS00530	0.47	+0.1
109,382	+		BWI76_RS00530	0.47	-1.0
109,382	+		BWI76_RS00530	0.47	+0.6
109,385	-		BWI76_RS00530	0.48	-0.2
109,385	-		BWI76_RS00530	0.48	-2.0
109,387	-		BWI76_RS00530	0.48	-1.5
109,420	+		BWI76_RS00530	0.51	-0.3
109,420	+		BWI76_RS00530	0.51	+0.4
109,420	+		BWI76_RS00530	0.51	-1.2
109,420	+		BWI76_RS00530	0.51	-2.4
109,420	+		BWI76_RS00530	0.51	-1.5
109,425	+		BWI76_RS00530	0.52	+0.6
109,426	-		BWI76_RS00530	0.52	-1.4
109,428	-		BWI76_RS00530	0.52	-0.7
109,428	-		BWI76_RS00530	0.52	-0.4
109,428	-		BWI76_RS00530	0.52	-0.5
109,428	-		BWI76_RS00530	0.52	+1.4
109,428	-		BWI76_RS00530	0.52	-0.4
109,428	-		BWI76_RS00530	0.52	+0.6
109,428	-		BWI76_RS00530	0.52	-3.0
109,428	-		BWI76_RS00530	0.52	+0.3
109,428	-		BWI76_RS00530	0.52	+1.0
109,430	+		BWI76_RS00530	0.52	-0.3
109,438	+		BWI76_RS00530	0.53	-0.8
109,438	-		BWI76_RS00530	0.53	-1.4
109,444	-		BWI76_RS00530	0.54	+0.5
109,495	+		BWI76_RS00530	0.59	+1.3
109,506	+		BWI76_RS00530	0.60	-1.0
109,519	+		BWI76_RS00530	0.61	+0.3
109,525	+		BWI76_RS00530	0.62	-3.9
109,527	-		BWI76_RS00530	0.62	-2.1
109,529	+		BWI76_RS00530	0.62	+0.5
109,530	+		BWI76_RS00530	0.62	-0.0
109,530	+		BWI76_RS00530	0.62	-2.8
109,532	-		BWI76_RS00530	0.63	+0.7
109,532	-		BWI76_RS00530	0.63	-1.7
109,532	-		BWI76_RS00530	0.63	+0.6
109,532	-		BWI76_RS00530	0.63	+1.7
109,538	+		BWI76_RS00530	0.63	+0.6
109,538	+		BWI76_RS00530	0.63	-1.0
109,538	+		BWI76_RS00530	0.63	-2.2
109,538	+		BWI76_RS00530	0.63	-1.5
109,538	+		BWI76_RS00530	0.63	+1.9
109,538	+		BWI76_RS00530	0.63	-2.0
109,538	+		BWI76_RS00530	0.63	-0.4
109,538	+		BWI76_RS00530	0.63	-1.7
109,538	+		BWI76_RS00530	0.63	-1.4
109,538	-		BWI76_RS00530	0.63	+0.7
109,538	-		BWI76_RS00530	0.63	+0.5
109,540	+				-0.4
109,540	+		BWI76_RS00530	0.64	-2.9
109,543	+		BWI76_RS00530	0.64	+2.0
109,546	-		BWI76_RS00530	0.64	+1.0
109,546	-		BWI76_RS00530	0.64	+0.9
109,546	-		BWI76_RS00530	0.64	-0.9
109,548	-		BWI76_RS00530	0.64	-0.2
109,548	-		BWI76_RS00530	0.64	-0.5
109,551	-		BWI76_RS00530	0.65	-0.0
109,551	-		BWI76_RS00530	0.65	-0.7
109,556	+		BWI76_RS00530	0.65	+0.8
109,559	-		BWI76_RS00530	0.65	-1.6
109,561	-		BWI76_RS00530	0.66	-0.6
109,563	+		BWI76_RS00530	0.66	+0.4
109,571	+		BWI76_RS00530	0.67	+0.5
109,574	-		BWI76_RS00530	0.67	+0.2
109,574	-		BWI76_RS00530	0.67	-0.2
109,580	+		BWI76_RS00530	0.68	-0.6
109,588	-		BWI76_RS00530	0.68	-3.2
109,592	+		BWI76_RS00530	0.69	-0.0
109,607	+		BWI76_RS00530	0.70	+0.1
109,619	-		BWI76_RS00530	0.72	+1.0
109,620	+		BWI76_RS00530	0.72	-0.7
109,620	+		BWI76_RS00530	0.72	-0.9
109,628	-		BWI76_RS00530	0.72	+0.1
109,628	-		BWI76_RS00530	0.72	-1.9
109,628	-				+1.6
109,628	-		BWI76_RS00530	0.72	-1.3
109,630	+		BWI76_RS00530	0.73	-0.0
109,670	-		BWI76_RS00530	0.77	-2.2
109,684	+		BWI76_RS00530	0.78	-2.5
109,692	-		BWI76_RS00530	0.79	-2.6
109,697	-		BWI76_RS00530	0.80	-1.9
109,707	-		BWI76_RS00530	0.81	-1.5
109,709	+		BWI76_RS00530	0.81	+3.0
109,709	+		BWI76_RS00530	0.81	+0.0
109,710	+		BWI76_RS00530	0.81	+2.6
109,710	+		BWI76_RS00530	0.81	-2.5
109,711	+		BWI76_RS00530	0.81	+0.2
109,711	+		BWI76_RS00530	0.81	-0.2
109,711	+		BWI76_RS00530	0.81	-0.8
109,712	-		BWI76_RS00530	0.81	-0.8
109,718	-		BWI76_RS00530	0.82	+0.7
109,718	-		BWI76_RS00530	0.82	-1.4
109,720	+		BWI76_RS00530	0.82	-2.8
109,720	+		BWI76_RS00530	0.82	+0.3
109,720	+		BWI76_RS00530	0.82	-0.4
109,720	+		BWI76_RS00530	0.82	+0.1
109,720	+		BWI76_RS00530	0.82	-1.9
109,720	+		BWI76_RS00530	0.82	-0.7
109,721	+		BWI76_RS00530	0.82	+1.4
109,722	-		BWI76_RS00530	0.82	+0.6
109,727	+		BWI76_RS00530	0.83	-1.1
109,727	+		BWI76_RS00530	0.83	-0.9
109,727	+				+1.0
109,727	+		BWI76_RS00530	0.83	-1.9
109,727	+		BWI76_RS00530	0.83	+0.2
109,727	+		BWI76_RS00530	0.83	-1.1
109,727	+		BWI76_RS00530	0.83	+0.0
109,728	-		BWI76_RS00530	0.83	-2.0
109,728	-		BWI76_RS00530	0.83	+0.3
109,728	-		BWI76_RS00530	0.83	-1.5
109,733	-		BWI76_RS00530	0.83	-1.5
109,733	-		BWI76_RS00530	0.83	+0.2
109,733	-		BWI76_RS00530	0.83	-2.0
109,733	-		BWI76_RS00530	0.83	+0.4
109,735	-		BWI76_RS00530	0.83	-0.6
109,735	-		BWI76_RS00530	0.83	-0.4
109,735	-		BWI76_RS00530	0.83	-2.4
109,735	-		BWI76_RS00530	0.83	-2.4
109,735	-		BWI76_RS00530	0.83	+0.0
109,735	-		BWI76_RS00530	0.83	+0.6
109,735	-		BWI76_RS00530	0.83	-0.5
109,735	-		BWI76_RS00530	0.83	+0.2
109,735	-		BWI76_RS00530	0.83	+1.0
109,735	-		BWI76_RS00530	0.83	+0.2
109,735	-		BWI76_RS00530	0.83	-2.0
109,742	+		BWI76_RS00530	0.84	+2.0
109,744	+		BWI76_RS00530	0.84	-0.6
109,744	+		BWI76_RS00530	0.84	-3.2
109,752	+		BWI76_RS00530	0.85	+0.1
109,752	+		BWI76_RS00530	0.85	-0.7
109,752	+		BWI76_RS00530	0.85	-0.0
109,752	-				-0.2
109,760	-		BWI76_RS00530	0.86	-3.6
109,760	-		BWI76_RS00530	0.86	+3.0
109,760	-		BWI76_RS00530	0.86	+0.7
109,798	+		BWI76_RS00530	0.90	+1.7
109,798	+		BWI76_RS00530	0.90	-0.3
109,806	-				-0.2
109,806	-				+1.0
109,806	-				+0.4
109,811	-				-1.0
109,848	+				-1.4
109,848	+				+1.5
109,848	+				+0.8
109,851	-				-1.0
109,856	-				+1.2
109,856	-				-0.8
109,856	-				+0.2
109,857	-				+3.0
109,862	+				-1.5
109,863	+				-2.6
109,863	+				-1.7
109,891	+				+0.1
109,891	+				-0.4
109,891	+				-1.0
109,899	-				+0.4
109,911	-				-1.5
109,927	+				+0.1
109,933	+				-0.9
109,934	+				-1.7
109,934	+				-1.9
109,942	-		BWI76_RS00535	0.10	-2.6
109,945	+		BWI76_RS00535	0.11	+1.4
109,945	+		BWI76_RS00535	0.11	-3.5
109,945	+		BWI76_RS00535	0.11	-1.4
109,945	+		BWI76_RS00535	0.11	-0.7
109,946	+		BWI76_RS00535	0.12	-0.6
109,946	+		BWI76_RS00535	0.12	-0.8
109,946	+		BWI76_RS00535	0.12	+0.2
109,946	+		BWI76_RS00535	0.12	-2.3
109,946	+		BWI76_RS00535	0.12	+0.3
109,953	-		BWI76_RS00535	0.14	-1.4
109,953	-		BWI76_RS00535	0.14	-2.4
109,954	-		BWI76_RS00535	0.14	-0.2
109,954	-		BWI76_RS00535	0.14	+0.6
109,954	-		BWI76_RS00535	0.14	+5.6
109,954	-		BWI76_RS00535	0.14	+0.3
109,954	-		BWI76_RS00535	0.14	+1.3
109,954	-		BWI76_RS00535	0.14	+5.0
109,954	-				+3.0
109,954	-		BWI76_RS00535	0.14	+3.0
109,954	-		BWI76_RS00535	0.14	+2.1
109,960	+		BWI76_RS00535	0.16	-2.7
109,989	+		BWI76_RS00535	0.25	+0.9
109,989	-		BWI76_RS00535	0.25	+4.6
109,989	-		BWI76_RS00535	0.25	+1.4
109,995	+		BWI76_RS00535	0.27	+0.4
110,000	+		BWI76_RS00535	0.29	-0.5
110,000	+		BWI76_RS00535	0.29	-1.5
110,008	-		BWI76_RS00535	0.31	-0.6
110,008	-		BWI76_RS00535	0.31	-1.3
110,008	-		BWI76_RS00535	0.31	+0.6
110,008	-		BWI76_RS00535	0.31	+0.2
110,043	+		BWI76_RS00535	0.43	-0.7
110,051	-		BWI76_RS00535	0.45	-1.1
110,051	-		BWI76_RS00535	0.45	-0.6
110,051	-		BWI76_RS00535	0.45	+0.4
110,051	-		BWI76_RS00535	0.45	-1.0
110,053	+		BWI76_RS00535	0.46	-0.7
110,095	+		BWI76_RS00535	0.59	-0.4
110,126	+		BWI76_RS00535	0.69	-1.1
110,126	+		BWI76_RS00535	0.69	-1.6
110,126	+		BWI76_RS00535	0.69	+0.7
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111,021	-		BWI76_RS00540	0.59	-0.8
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111,112	+		BWI76_RS00540	0.65	+3.1
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