Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00525

Experiment: rhizosphere EcoFAB sample 3; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rhizosphere EcoFAB sample 3; outgrowth in LB
107,630	-		BWI76_RS00520	0.72	+2.4
107,667	+		BWI76_RS00520	0.73	-3.4
107,691	+		BWI76_RS00520	0.74	+0.8
107,756	-		BWI76_RS00520	0.76	+0.4
107,763	+		BWI76_RS00520	0.77	+0.1
107,771	-		BWI76_RS00520	0.77	-0.0
107,779	-		BWI76_RS00520	0.77	-0.2
107,812	-		BWI76_RS00520	0.79	+1.1
107,833	+		BWI76_RS00520	0.79	+0.8
107,846	-		BWI76_RS00520	0.80	+0.6
107,882	+		BWI76_RS00520	0.81	+0.8
107,903	-		BWI76_RS00520	0.82	+1.2
107,910	+		BWI76_RS00520	0.82	-0.8
107,916	-		BWI76_RS00520	0.83	-0.4
107,916	-		BWI76_RS00520	0.83	+0.0
107,960	-		BWI76_RS00520	0.84	-1.8
108,045	+		BWI76_RS00520	0.88	-1.2
108,045	+		BWI76_RS00520	0.88	-1.0
108,053	-		BWI76_RS00520	0.88	-0.5
108,053	-		BWI76_RS00520	0.88	-0.7
108,063	-		BWI76_RS00520	0.88	+1.0
108,073	+		BWI76_RS00520	0.89	+0.9
108,158	+				-0.0
108,163	+				-3.0
108,163	+				+0.2
108,166	-				-2.8
108,171	-				-1.1
108,171	-				+0.3
108,171	-				+0.3
108,171	-				+1.0
108,173	+				+0.2
108,173	+				-0.4
108,173	+				+0.3
108,181	-				+0.7
108,181	-				+0.1
108,181	-				+1.2
108,181	-				-1.1
108,181	-				+0.1
108,181	-				+0.0
108,240	-				+1.4
108,246	+				-0.4
108,247	-				+0.1
108,247	-				-0.9
108,254	+				+3.0
108,259	+				-1.1
108,259	+				+0.1
108,261	-				+0.4
108,262	-				+1.0
108,267	-				-2.5
108,274	-				+1.3
108,276	-				+1.8
108,278	-				-0.3
108,280	+				-1.7
108,283	-				+1.6
108,283	-				+0.7
108,285	+				-0.6
108,285	+				+2.2
108,285	+				+0.7
108,285	+				-0.2
108,285	+				+3.3
108,285	+				+1.2
108,285	+				-0.9
108,285	+				-3.2
108,285	+				-0.0
108,285	+				-0.1
108,285	+				+1.4
108,285	+				+0.0
108,285	+				-0.1
108,285	+				-1.3
108,285	+				+1.5
108,285	+				-0.8
108,285	+				-0.6
108,285	+				-1.0
108,285	+				+1.4
108,285	+				-2.0
108,285	+				+1.1
108,285	+				-1.6
108,285	+				-0.0
108,285	+				+0.6
108,285	+				-1.3
108,285	+				-0.8
108,285	+				+1.1
108,285	+				+0.6
108,285	+				+1.0
108,285	+				+0.2
108,285	+				-3.0
108,285	+				+2.2
108,285	+				+0.2
108,285	+				+0.4
108,285	+				-0.2
108,285	+				+0.6
108,285	+				-1.6
108,287	+				-0.2
108,288	-				+1.0
108,292	+				-1.1
108,292	+				-2.8
108,292	+				-2.9
108,292	+				+1.1
108,293	-				-0.7
108,293	-				-0.1
108,293	-				+1.6
108,293	-				-2.3
108,293	-				+0.3
108,293	-				-1.6
108,293	-				-0.7
108,293	-				+0.7
108,293	-				+0.1
108,293	-				+0.3
108,293	-				-0.9
108,293	-				+1.6
108,293	-				+0.9
108,293	-				+0.7
108,293	-				+1.5
108,293	-				+0.3
108,293	-				-1.4
108,293	-				+0.4
108,293	-				-0.0
108,293	-				+1.0
108,293	-				+0.3
108,293	-				+1.5
108,293	-				-0.1
108,293	-				+1.4
108,293	-				+0.1
108,293	-				-0.6
108,293	-				-0.5
108,293	-				+0.6
108,293	-				+0.3
108,293	-				+0.4
108,293	-				+1.2
108,293	-				+0.5
108,293	-				-1.9
108,293	-				-0.0
108,293	-				-0.6
108,293	-				-1.6
108,293	-				-0.6
108,293	-				-1.7
108,293	-				+0.2
108,293	-				+2.5
108,293	-				+0.6
108,293	-				+0.8
108,293	-				-1.8
108,293	-				+0.6
108,293	-				+1.1
108,293	-				+1.5
108,293	-				+0.8
108,293	-				-1.5
108,293	-				-2.1
108,300	+				-0.4
108,300	-				-1.1
108,300	-				-0.4
108,300	-				+0.5
108,300	-				-2.5
108,300	-				-1.8
108,300	-				+0.8
108,300	-				-0.1
108,300	-				+2.0
108,300	-				-0.3
108,300	-				-0.1
108,300	-				+0.6
108,302	-				-0.1
108,307	+				-2.1
108,307	+				-0.8
108,309	+				+1.4
108,315	-				-1.9
108,315	-				+0.2
108,315	-				+0.3
108,377	+				+0.4
108,377	+				+0.4
108,379	+				+0.2
108,385	-				+0.4
108,385	-				-0.9
108,385	-				-3.1
108,385	-				+0.2
108,385	-				+0.9
108,387	-				+0.9
108,390	-				+0.6
108,390	-				+0.5
108,397	-				+0.4
108,397	-				-1.9
108,397	-				+0.5
108,447	+				+0.4
108,524	-				-2.0
108,527	+				-0.7
108,527	+				+0.1
108,527	+				-1.8
108,542	-				+1.4
108,563	+				-0.6
108,563	+				+0.1
108,563	+				-1.3
108,566	+				+0.2
108,571	-				-0.8
108,571	-				-1.3
108,573	+				-2.1
108,573	+				-1.3
108,573	+				-0.2
108,573	+				-0.6
108,573	+				+0.8
108,573	+				-0.0
108,580	-				+0.6
108,581	-				+0.6
108,581	-				-0.5
108,581	-				+1.7
108,596	+				+1.1
108,596	+				-0.4
108,604	-				-0.6
108,604	-				-0.1
108,628	+				-0.5
108,628	+				+3.0
108,662	+		BWI76_RS00525	0.17	+0.7
108,663	-		BWI76_RS00525	0.17	-2.4
108,670	-		BWI76_RS00525	0.20	-0.9
108,685	-		BWI76_RS00525	0.27	-1.1
108,686	-		BWI76_RS00525	0.28	-1.1
108,714	-		BWI76_RS00525	0.41	-1.7
108,744	+		BWI76_RS00525	0.55	-0.0
108,754	-		BWI76_RS00525	0.59	-0.2
108,810	-		BWI76_RS00525	0.85	-1.4
108,813	+		BWI76_RS00525	0.87	-3.3
108,846	-				-2.2
108,850	-				-0.9
108,860	+				+0.6
108,867	+				-0.7
108,867	+				-2.5
108,867	+				-0.7
108,867	+				+0.6
108,867	+				-1.5
108,875	-				-2.0
108,875	-				+1.1
108,885	+				-0.2
108,894	+				-4.9
108,904	+				+3.0
108,910	-				-0.1
108,932	+				-0.3
108,991	+				-1.4
108,991	+				+0.7
108,991	+				-2.3
108,999	-				-1.9
108,999	-				-1.0
108,999	-				+1.9
109,048	+		BWI76_RS00530	0.13	+1.0
109,054	+		BWI76_RS00530	0.14	-3.1
109,060	+		BWI76_RS00530	0.15	-2.1
109,062	-		BWI76_RS00530	0.15	-2.1
109,065	+		BWI76_RS00530	0.15	-0.6
109,065	+		BWI76_RS00530	0.15	-3.6
109,065	+		BWI76_RS00530	0.15	-1.7
109,066	+		BWI76_RS00530	0.15	-2.8
109,068	-		BWI76_RS00530	0.15	-2.0
109,068	-		BWI76_RS00530	0.15	+0.1
109,068	-		BWI76_RS00530	0.15	-2.4
109,068	-		BWI76_RS00530	0.15	-2.1
109,068	-		BWI76_RS00530	0.15	-0.9
109,073	-		BWI76_RS00530	0.16	+0.7
109,073	-		BWI76_RS00530	0.16	-2.9
109,073	-		BWI76_RS00530	0.16	+3.0
109,073	-		BWI76_RS00530	0.16	-1.4
109,074	-		BWI76_RS00530	0.16	-1.3
109,092	+		BWI76_RS00530	0.18	-0.6
109,092	+		BWI76_RS00530	0.18	+2.0
109,092	+		BWI76_RS00530	0.18	-0.7
109,092	+		BWI76_RS00530	0.18	+1.0
109,092	+		BWI76_RS00530	0.18	-0.1
109,092	+		BWI76_RS00530	0.18	-2.1
109,092	+		BWI76_RS00530	0.18	-0.6
109,092	+		BWI76_RS00530	0.18	-0.1
109,092	+		BWI76_RS00530	0.18	+0.2
109,092	+		BWI76_RS00530	0.18	-0.9
109,092	+		BWI76_RS00530	0.18	-1.2
109,092	+		BWI76_RS00530	0.18	-2.1
109,092	+		BWI76_RS00530	0.18	-2.5
109,092	+		BWI76_RS00530	0.18	+0.4
109,100	-		BWI76_RS00530	0.19	-2.2
109,100	-		BWI76_RS00530	0.19	+1.0
109,100	-		BWI76_RS00530	0.19	-1.5
109,100	-		BWI76_RS00530	0.19	-1.6
109,100	-		BWI76_RS00530	0.19	-2.1
109,100	-		BWI76_RS00530	0.19	+0.3
109,100	-				+0.4
109,100	-		BWI76_RS00530	0.19	-2.8
109,100	-		BWI76_RS00530	0.19	-2.5
109,100	-		BWI76_RS00530	0.19	-2.2
109,100	-		BWI76_RS00530	0.19	-2.2
109,100	-				+0.6
109,100	-		BWI76_RS00530	0.19	+1.4
109,100	-		BWI76_RS00530	0.19	-1.5
109,102	+		BWI76_RS00530	0.19	+3.0
109,104	+		BWI76_RS00530	0.19	-1.4
109,110	+		BWI76_RS00530	0.20	+0.1
109,110	+		BWI76_RS00530	0.20	+3.6
109,110	+		BWI76_RS00530	0.20	-1.6
109,110	+		BWI76_RS00530	0.20	-1.2
109,110	+		BWI76_RS00530	0.20	+0.4
109,110	+		BWI76_RS00530	0.20	-1.3
109,113	-		BWI76_RS00530	0.20	-0.2
109,113	-		BWI76_RS00530	0.20	+0.2
109,118	-		BWI76_RS00530	0.20	-1.6
109,118	-		BWI76_RS00530	0.20	-2.4
109,118	-		BWI76_RS00530	0.20	+0.2
109,118	-		BWI76_RS00530	0.20	-2.3
109,118	-		BWI76_RS00530	0.20	-1.1
109,122	+		BWI76_RS00530	0.21	+1.2
109,125	+		BWI76_RS00530	0.21	-0.2
109,125	+		BWI76_RS00530	0.21	-0.5
109,125	+		BWI76_RS00530	0.21	-0.9
109,133	-		BWI76_RS00530	0.22	-0.6
109,133	-		BWI76_RS00530	0.22	+2.1
109,133	-		BWI76_RS00530	0.22	+1.4
109,182	+		BWI76_RS00530	0.27	+0.4
109,190	-		BWI76_RS00530	0.28	+0.4
109,195	+		BWI76_RS00530	0.28	-3.6
109,195	+		BWI76_RS00530	0.28	+0.3
109,195	+		BWI76_RS00530	0.28	-0.6
109,195	+		BWI76_RS00530	0.28	-1.5
109,203	-		BWI76_RS00530	0.29	-2.5
109,203	-		BWI76_RS00530	0.29	+0.6
109,203	-		BWI76_RS00530	0.29	-0.4
109,203	-		BWI76_RS00530	0.29	+1.9
109,212	+		BWI76_RS00530	0.30	-0.6
109,217	+		BWI76_RS00530	0.31	-1.1
109,236	-		BWI76_RS00530	0.33	-1.8
109,253	+		BWI76_RS00530	0.34	+0.2
109,260	+		BWI76_RS00530	0.35	-0.7
109,260	+		BWI76_RS00530	0.35	-2.5
109,260	+		BWI76_RS00530	0.35	-2.0
109,268	-		BWI76_RS00530	0.36	-0.4
109,271	+		BWI76_RS00530	0.36	-2.8
109,277	+		BWI76_RS00530	0.37	-1.3
109,279	-		BWI76_RS00530	0.37	-1.9
109,292	+		BWI76_RS00530	0.38	-1.0
109,292	+		BWI76_RS00530	0.38	+1.8
109,292	+		BWI76_RS00530	0.38	-0.5
109,292	+		BWI76_RS00530	0.38	-0.4
109,292	+		BWI76_RS00530	0.38	+1.0
109,292	+		BWI76_RS00530	0.38	-2.1
109,292	+		BWI76_RS00530	0.38	-1.4
109,292	+		BWI76_RS00530	0.38	+2.1
109,292	+		BWI76_RS00530	0.38	-1.6
109,294	+		BWI76_RS00530	0.38	-1.6
109,294	+		BWI76_RS00530	0.38	+0.2
109,297	-				+1.9
109,300	-		BWI76_RS00530	0.39	-0.6
109,300	-		BWI76_RS00530	0.39	+0.5
109,300	-		BWI76_RS00530	0.39	-0.8
109,300	-		BWI76_RS00530	0.39	-0.1
109,300	-		BWI76_RS00530	0.39	-0.7
109,300	-		BWI76_RS00530	0.39	-0.5
109,300	-		BWI76_RS00530	0.39	+0.2
109,300	-		BWI76_RS00530	0.39	-0.7
109,300	-		BWI76_RS00530	0.39	+0.6
109,300	-		BWI76_RS00530	0.39	-0.2
109,302	-		BWI76_RS00530	0.39	+1.2
109,302	-		BWI76_RS00530	0.39	-0.9
109,302	-		BWI76_RS00530	0.39	+0.6
109,302	-		BWI76_RS00530	0.39	+0.3
109,302	-		BWI76_RS00530	0.39	-0.8
109,304	+		BWI76_RS00530	0.39	-0.1
109,304	+		BWI76_RS00530	0.39	+0.8
109,307	-		BWI76_RS00530	0.40	-2.7
109,314	-		BWI76_RS00530	0.40	-2.2
109,337	-		BWI76_RS00530	0.43	-0.3
109,368	-		BWI76_RS00530	0.46	-0.5
109,377	+		BWI76_RS00530	0.47	-0.5
109,382	+		BWI76_RS00530	0.47	-0.3
109,382	+		BWI76_RS00530	0.47	-1.2
109,382	+		BWI76_RS00530	0.47	-3.0
109,382	+		BWI76_RS00530	0.47	+0.1
109,382	+		BWI76_RS00530	0.47	-1.0
109,382	+		BWI76_RS00530	0.47	+0.6
109,385	-		BWI76_RS00530	0.48	-0.2
109,385	-		BWI76_RS00530	0.48	-2.0
109,387	-		BWI76_RS00530	0.48	-1.5
109,420	+		BWI76_RS00530	0.51	-0.3
109,420	+		BWI76_RS00530	0.51	+0.4
109,420	+		BWI76_RS00530	0.51	-1.2
109,420	+		BWI76_RS00530	0.51	-2.4
109,420	+		BWI76_RS00530	0.51	-1.5
109,425	+		BWI76_RS00530	0.52	+0.6
109,426	-		BWI76_RS00530	0.52	-1.4
109,428	-		BWI76_RS00530	0.52	-0.7
109,428	-		BWI76_RS00530	0.52	-0.4
109,428	-		BWI76_RS00530	0.52	-0.5
109,428	-		BWI76_RS00530	0.52	+1.4
109,428	-		BWI76_RS00530	0.52	-0.4
109,428	-		BWI76_RS00530	0.52	+0.6
109,428	-		BWI76_RS00530	0.52	-3.0
109,428	-		BWI76_RS00530	0.52	+0.3
109,428	-		BWI76_RS00530	0.52	+1.0
109,430	+		BWI76_RS00530	0.52	-0.3
109,438	+		BWI76_RS00530	0.53	-0.8
109,438	-		BWI76_RS00530	0.53	-1.4
109,444	-		BWI76_RS00530	0.54	+0.5
109,495	+		BWI76_RS00530	0.59	+1.3
109,506	+		BWI76_RS00530	0.60	-1.0
109,519	+		BWI76_RS00530	0.61	+0.3
109,525	+		BWI76_RS00530	0.62	-3.9
109,527	-		BWI76_RS00530	0.62	-2.1
109,529	+		BWI76_RS00530	0.62	+0.5
109,530	+		BWI76_RS00530	0.62	-0.0
109,530	+		BWI76_RS00530	0.62	-2.8
109,532	-		BWI76_RS00530	0.63	+0.7
109,532	-		BWI76_RS00530	0.63	-1.7
109,532	-		BWI76_RS00530	0.63	+0.6
109,532	-		BWI76_RS00530	0.63	+1.7
109,538	+		BWI76_RS00530	0.63	+0.6
109,538	+		BWI76_RS00530	0.63	-1.0
109,538	+		BWI76_RS00530	0.63	-2.2
109,538	+		BWI76_RS00530	0.63	-1.5
109,538	+		BWI76_RS00530	0.63	+1.9
109,538	+		BWI76_RS00530	0.63	-2.0
109,538	+		BWI76_RS00530	0.63	-0.4
109,538	+		BWI76_RS00530	0.63	-1.7
109,538	+		BWI76_RS00530	0.63	-1.4
109,538	-		BWI76_RS00530	0.63	+0.7
109,538	-		BWI76_RS00530	0.63	+0.5
109,540	+				-0.4
109,540	+		BWI76_RS00530	0.64	-2.9
109,543	+		BWI76_RS00530	0.64	+2.0
109,546	-		BWI76_RS00530	0.64	+1.0
109,546	-		BWI76_RS00530	0.64	+0.9
109,546	-		BWI76_RS00530	0.64	-0.9
109,548	-		BWI76_RS00530	0.64	-0.2
109,548	-		BWI76_RS00530	0.64	-0.5
109,551	-		BWI76_RS00530	0.65	-0.0
109,551	-		BWI76_RS00530	0.65	-0.7
109,556	+		BWI76_RS00530	0.65	+0.8
109,559	-		BWI76_RS00530	0.65	-1.6
109,561	-		BWI76_RS00530	0.66	-0.6
109,563	+		BWI76_RS00530	0.66	+0.4
109,571	+		BWI76_RS00530	0.67	+0.5
109,574	-		BWI76_RS00530	0.67	+0.2
109,574	-		BWI76_RS00530	0.67	-0.2
109,580	+		BWI76_RS00530	0.68	-0.6
109,588	-		BWI76_RS00530	0.68	-3.2
109,592	+		BWI76_RS00530	0.69	-0.0
109,607	+		BWI76_RS00530	0.70	+0.1
109,619	-		BWI76_RS00530	0.72	+1.0
109,620	+		BWI76_RS00530	0.72	-0.7
109,620	+		BWI76_RS00530	0.72	-0.9
109,628	-		BWI76_RS00530	0.72	+0.1
109,628	-		BWI76_RS00530	0.72	-1.9
109,628	-				+1.6
109,628	-		BWI76_RS00530	0.72	-1.3
109,630	+		BWI76_RS00530	0.73	-0.0
109,670	-		BWI76_RS00530	0.77	-2.2
109,684	+		BWI76_RS00530	0.78	-2.5
109,692	-		BWI76_RS00530	0.79	-2.6
109,697	-		BWI76_RS00530	0.80	-1.9
109,707	-		BWI76_RS00530	0.81	-1.5
109,709	+		BWI76_RS00530	0.81	+3.0
109,709	+		BWI76_RS00530	0.81	+0.0
109,710	+		BWI76_RS00530	0.81	+2.6
109,710	+		BWI76_RS00530	0.81	-2.5
109,711	+		BWI76_RS00530	0.81	+0.2
109,711	+		BWI76_RS00530	0.81	-0.2
109,711	+		BWI76_RS00530	0.81	-0.8
109,712	-		BWI76_RS00530	0.81	-0.8
109,718	-		BWI76_RS00530	0.82	+0.7
109,718	-		BWI76_RS00530	0.82	-1.4
109,720	+		BWI76_RS00530	0.82	-2.8
109,720	+		BWI76_RS00530	0.82	+0.3
109,720	+		BWI76_RS00530	0.82	-0.4
109,720	+		BWI76_RS00530	0.82	+0.1
109,720	+		BWI76_RS00530	0.82	-1.9
109,720	+		BWI76_RS00530	0.82	-0.7
109,721	+		BWI76_RS00530	0.82	+1.4
109,722	-		BWI76_RS00530	0.82	+0.6
109,727	+		BWI76_RS00530	0.83	-1.1
109,727	+		BWI76_RS00530	0.83	-0.9
109,727	+				+1.0
109,727	+		BWI76_RS00530	0.83	-1.9
109,727	+		BWI76_RS00530	0.83	+0.2
109,727	+		BWI76_RS00530	0.83	-1.1
109,727	+		BWI76_RS00530	0.83	+0.0
109,728	-		BWI76_RS00530	0.83	-2.0
109,728	-		BWI76_RS00530	0.83	+0.3
109,728	-		BWI76_RS00530	0.83	-1.5
109,733	-		BWI76_RS00530	0.83	-1.5
109,733	-		BWI76_RS00530	0.83	+0.2
109,733	-		BWI76_RS00530	0.83	-2.0
109,733	-		BWI76_RS00530	0.83	+0.4
109,735	-		BWI76_RS00530	0.83	-0.6
109,735	-		BWI76_RS00530	0.83	-0.4
109,735	-		BWI76_RS00530	0.83	-2.4
109,735	-		BWI76_RS00530	0.83	-2.4
109,735	-		BWI76_RS00530	0.83	+0.0
109,735	-		BWI76_RS00530	0.83	+0.6
109,735	-		BWI76_RS00530	0.83	-0.5
109,735	-		BWI76_RS00530	0.83	+0.2
109,735	-		BWI76_RS00530	0.83	+1.0
109,735	-		BWI76_RS00530	0.83	+0.2
109,735	-		BWI76_RS00530	0.83	-2.0
109,742	+		BWI76_RS00530	0.84	+2.0
109,744	+		BWI76_RS00530	0.84	-0.6
109,744	+		BWI76_RS00530	0.84	-3.2
109,752	+		BWI76_RS00530	0.85	+0.1
109,752	+		BWI76_RS00530	0.85	-0.7
109,752	+		BWI76_RS00530	0.85	-0.0
109,752	-				-0.2
109,760	-		BWI76_RS00530	0.86	-3.6
109,760	-		BWI76_RS00530	0.86	+3.0
109,760	-		BWI76_RS00530	0.86	+0.7
109,798	+		BWI76_RS00530	0.90	+1.7
109,798	+		BWI76_RS00530	0.90	-0.3
109,806	-				-0.2
109,806	-				+1.0
109,806	-				+0.4
109,811	-				-1.0