Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00150

Experiment: rhizosphere EcoFAB sample 3; outgrowth in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS00140 and BWI76_RS00145 are separated by 49 nucleotidesBWI76_RS00145 and BWI76_RS00150 are separated by 47 nucleotidesBWI76_RS00150 and BWI76_RS00155 overlap by 1 nucleotides BWI76_RS00140: BWI76_RS00140 - phosphate transport system regulator PhoU, at 27,190 to 27,915 _RS00140 BWI76_RS00145: BWI76_RS00145 - phosphate ABC transporter ATP-binding protein, at 27,965 to 28,738 _RS00145 BWI76_RS00150: BWI76_RS00150 - phosphate transporter permease subunit PtsA, at 28,786 to 29,676 _RS00150 BWI76_RS00155: BWI76_RS00155 - phosphate transporter permease subunit PstC, at 29,676 to 30,635 _RS00155 Position (kb) 28 29 30Strain fitness (log2 ratio) -1 0 1at 29.661 kb on - strandat 29.795 kb on - strand, within BWI76_RS00155

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Per-strain Table

Position Strand Gene LocusTag Fraction rhizosphere EcoFAB sample 3; outgrowth in LB
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29,661 - -0.6
29,795 - BWI76_RS00155 0.12 -0.6

Or see this region's nucleotide sequence