Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08385

Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with MOPS
1,873,411	-		PFLU_RS08380	0.28	+1.3
1,873,411	-		PFLU_RS08380	0.28	-1.0
1,873,411	-		PFLU_RS08380	0.28	+0.1
1,873,457	+		PFLU_RS08380	0.32	-0.3
1,873,457	+		PFLU_RS08380	0.32	-1.7
1,873,457	+		PFLU_RS08380	0.32	-0.9
1,873,457	+		PFLU_RS08380	0.32	-2.3
1,873,457	+		PFLU_RS08380	0.32	-0.2
1,873,457	+		PFLU_RS08380	0.32	+0.2
1,873,457	+		PFLU_RS08380	0.32	-0.9
1,873,457	+		PFLU_RS08380	0.32	-1.2
1,873,457	+		PFLU_RS08380	0.32	-0.5
1,873,457	+		PFLU_RS08380	0.32	-1.5
1,873,457	+		PFLU_RS08380	0.32	-0.8
1,873,457	+		PFLU_RS08380	0.32	+0.1
1,873,457	+		PFLU_RS08380	0.32	-1.2
1,873,458	-		PFLU_RS08380	0.32	+0.3
1,873,458	-		PFLU_RS08380	0.32	-1.5
1,873,458	-		PFLU_RS08380	0.32	+1.0
1,873,458	-		PFLU_RS08380	0.32	-1.5
1,873,458	-		PFLU_RS08380	0.32	-2.3
1,873,458	-		PFLU_RS08380	0.32	+1.0
1,873,458	-		PFLU_RS08380	0.32	-0.6
1,873,499	+		PFLU_RS08380	0.36	-0.2
1,873,500	-		PFLU_RS08380	0.36	+0.2
1,873,727	+		PFLU_RS08380	0.57	+0.5
1,873,727	+		PFLU_RS08380	0.57	+0.2
1,873,728	-		PFLU_RS08380	0.58	+1.1
1,873,728	-		PFLU_RS08380	0.58	+1.0
1,873,728	-		PFLU_RS08380	0.58	-1.3
1,873,901	+		PFLU_RS08380	0.74	-1.5
1,873,901	+		PFLU_RS08380	0.74	-1.8
1,873,901	+		PFLU_RS08380	0.74	-0.5
1,873,901	+		PFLU_RS08380	0.74	+0.4
1,873,901	+		PFLU_RS08380	0.74	-1.6
1,873,901	+		PFLU_RS08380	0.74	-0.5
1,873,902	-		PFLU_RS08380	0.74	-1.3
1,873,902	-		PFLU_RS08380	0.74	+0.2
1,873,902	-		PFLU_RS08380	0.74	-1.2
1,873,902	-		PFLU_RS08380	0.74	-0.8
1,873,902	-		PFLU_RS08380	0.74	-1.8
1,873,902	-		PFLU_RS08380	0.74	+0.7
1,873,902	-		PFLU_RS08380	0.74	-0.8
1,873,919	+		PFLU_RS08380	0.75	-1.8
1,873,919	+		PFLU_RS08380	0.75	-1.8
1,873,919	+		PFLU_RS08380	0.75	-0.9
1,873,919	+		PFLU_RS08380	0.75	+0.3
1,873,919	+		PFLU_RS08380	0.75	-0.7
1,873,920	-		PFLU_RS08380	0.75	-0.9
1,873,920	-		PFLU_RS08380	0.75	-1.7
1,873,920	-		PFLU_RS08380	0.75	-1.9
1,873,920	-		PFLU_RS08380	0.75	-0.9
1,873,920	-		PFLU_RS08380	0.75	-0.0
1,873,967	+		PFLU_RS08380	0.80	-2.9
1,873,967	+		PFLU_RS08380	0.80	-0.5
1,873,967	+		PFLU_RS08380	0.80	-0.6
1,873,967	+		PFLU_RS08380	0.80	-0.2
1,873,967	+		PFLU_RS08380	0.80	-1.6
1,873,968	-		PFLU_RS08380	0.80	-0.6
1,874,158	+				-1.5
1,874,158	+				-1.6
1,874,158	+				-1.6
1,874,159	-				-2.5
1,874,159	-				-0.9
1,874,159	-				-1.8
1,874,173	+				+0.1
1,874,173	+				-0.2
1,874,174	-				-0.7
1,874,174	-				-0.5
1,874,191	-				-1.3
1,874,275	+				-1.2
1,874,275	+				-1.5
1,874,275	+				-1.6
1,874,275	+				+0.5
1,874,282	+				-1.7
1,874,282	+				-1.4
1,874,283	-				-0.3
1,874,317	+				-0.5
1,874,441	-		PFLU_RS08385	0.29	-0.5
1,874,441	-		PFLU_RS08385	0.29	-0.2
1,874,448	+		PFLU_RS08385	0.30	-0.2
1,874,449	-		PFLU_RS08385	0.31	-0.8
1,874,554	+		PFLU_RS08385	0.55	-0.4
1,874,555	-		PFLU_RS08385	0.55	+0.5
1,874,591	+		PFLU_RS08385	0.63	+0.2
1,874,592	-		PFLU_RS08385	0.63	-1.5
1,874,706	+		PFLU_RS08385	0.90	-1.9
1,874,706	+		PFLU_RS08385	0.90	-1.6
1,874,706	+		PFLU_RS08385	0.90	-1.2
1,874,752	+				+0.9
1,874,752	+				-0.6
1,874,752	+				-1.2
1,874,752	+				-0.3
1,874,752	+				-0.9
1,874,752	+				-0.8
1,874,752	+				-1.7
1,874,752	+				-0.5
1,874,753	-				-0.1
1,874,753	-				-0.4
1,874,753	-				-2.2
1,874,753	-				-0.6
1,874,753	-				+0.5
1,874,753	-				-0.8
1,874,753	-				-1.7
1,874,753	-				+0.2
1,874,753	-				-1.6
1,874,753	-				+1.4
1,874,753	-				-0.7
1,874,753	-				-0.1
1,874,753	-				+0.2
1,874,753	-				-2.0
1,874,796	+		PFLU_RS08390	0.12	-2.5
1,874,796	+		PFLU_RS08390	0.12	+2.1
1,874,796	+		PFLU_RS08390	0.12	-0.9
1,874,796	+		PFLU_RS08390	0.12	+0.7
1,874,796	+		PFLU_RS08390	0.12	+2.5
1,874,796	+		PFLU_RS08390	0.12	-1.3
1,874,796	+		PFLU_RS08390	0.12	-0.1
1,874,796	+		PFLU_RS08390	0.12	-0.6
1,874,796	+		PFLU_RS08390	0.12	-1.1
1,874,796	+		PFLU_RS08390	0.12	+0.8
1,874,796	+		PFLU_RS08390	0.12	+0.4
1,874,796	+		PFLU_RS08390	0.12	-1.6
1,874,796	+		PFLU_RS08390	0.12	+0.9
1,874,796	+		PFLU_RS08390	0.12	-2.3
1,874,796	+		PFLU_RS08390	0.12	+0.9
1,874,797	-		PFLU_RS08390	0.12	+0.9
1,874,797	-		PFLU_RS08390	0.12	+0.2
1,874,797	-		PFLU_RS08390	0.12	-1.1
1,874,797	-		PFLU_RS08390	0.12	-0.6
1,874,797	-		PFLU_RS08390	0.12	-0.6
1,874,797	-		PFLU_RS08390	0.12	-0.3
1,874,797	-		PFLU_RS08390	0.12	-0.6
1,874,797	-		PFLU_RS08390	0.12	-1.8
1,874,797	-		PFLU_RS08390	0.12	-1.7
1,874,797	-		PFLU_RS08390	0.12	-0.9
1,874,798	+		PFLU_RS08390	0.13	+0.2
1,874,798	+		PFLU_RS08390	0.13	+0.1
1,874,798	+		PFLU_RS08390	0.13	+1.5
1,874,798	+		PFLU_RS08390	0.13	-2.4
1,874,798	+		PFLU_RS08390	0.13	-0.2
1,874,798	+		PFLU_RS08390	0.13	-0.1
1,874,798	+		PFLU_RS08390	0.13	-2.1
1,874,798	+		PFLU_RS08390	0.13	-0.3
1,874,798	+		PFLU_RS08390	0.13	-0.8
1,874,799	-		PFLU_RS08390	0.13	-0.9
1,874,799	-		PFLU_RS08390	0.13	-1.1
1,874,799	-		PFLU_RS08390	0.13	-2.4
1,874,799	-		PFLU_RS08390	0.13	-0.4
1,874,799	-		PFLU_RS08390	0.13	-0.3
1,874,799	-		PFLU_RS08390	0.13	+0.2
1,874,799	-		PFLU_RS08390	0.13	-0.4
1,874,922	-		PFLU_RS08390	0.45	-0.8
1,874,995	+		PFLU_RS08390	0.64	+0.5
1,874,996	-		PFLU_RS08390	0.64	+0.3
1,875,056	+		PFLU_RS08390	0.79	+0.3
1,875,056	+		PFLU_RS08390	0.79	-0.5
1,875,056	+		PFLU_RS08390	0.79	+2.2
1,875,056	+		PFLU_RS08390	0.79	+1.5
1,875,056	+		PFLU_RS08390	0.79	-3.1
1,875,056	+		PFLU_RS08390	0.79	+0.2
1,875,057	-		PFLU_RS08390	0.80	+0.5
1,875,057	-		PFLU_RS08390	0.80	-2.5
1,875,057	-		PFLU_RS08390	0.80	-1.3
1,875,069	+		PFLU_RS08390	0.83	-0.8
1,875,070	-		PFLU_RS08390	0.83	+1.0
1,875,070	-		PFLU_RS08390	0.83	-0.3
1,875,096	-		PFLU_RS08390	0.90	+0.8
1,875,143	+				-0.6
1,875,143	+				+0.8
1,875,143	+				-1.0
1,875,143	+				-2.3
1,875,143	+				-0.2
1,875,143	+				+3.3
1,875,143	+				-0.1
1,875,143	+				+1.7
1,875,143	+				-0.8
1,875,143	+				+0.3
1,875,143	+				-0.8
1,875,144	-				-0.1
1,875,144	-				+0.5
1,875,144	-				+1.5
1,875,144	-				-1.3
1,875,144	-				-2.2
1,875,144	-				+0.0
1,875,144	-				-1.1
1,875,144	-				-2.4
1,875,198	+				+0.5
1,875,198	+				+1.5
1,875,255	+		PFLU_RS08395	0.13	+0.7
1,875,255	+		PFLU_RS08395	0.13	+0.7
1,875,255	+		PFLU_RS08395	0.13	+1.1
1,875,255	+		PFLU_RS08395	0.13	-0.8
1,875,255	+		PFLU_RS08395	0.13	+0.2
1,875,255	+		PFLU_RS08395	0.13	+2.7
1,875,255	+		PFLU_RS08395	0.13	+0.5
1,875,255	+		PFLU_RS08395	0.13	+0.3
1,875,255	+		PFLU_RS08395	0.13	+0.2
1,875,256	-		PFLU_RS08395	0.13	-0.3
1,875,256	-		PFLU_RS08395	0.13	-0.3
1,875,256	-		PFLU_RS08395	0.13	+1.9
1,875,256	-		PFLU_RS08395	0.13	+1.3
1,875,333	+		PFLU_RS08395	0.21	+0.3
1,875,451	+		PFLU_RS08395	0.33	-1.9
1,875,451	+		PFLU_RS08395	0.33	+0.9
1,875,451	+		PFLU_RS08395	0.33	-0.2
1,875,451	+		PFLU_RS08395	0.33	-0.8
1,875,451	+		PFLU_RS08395	0.33	-1.2
1,875,451	+		PFLU_RS08395	0.33	+0.4
1,875,452	-		PFLU_RS08395	0.33	-1.5
1,875,452	-		PFLU_RS08395	0.33	-0.8
1,875,452	-		PFLU_RS08395	0.33	-1.8
1,875,452	-		PFLU_RS08395	0.33	+0.6
1,875,452	-		PFLU_RS08395	0.33	-2.2
1,875,534	+		PFLU_RS08395	0.42	+0.3
1,875,534	+		PFLU_RS08395	0.42	+1.4
1,875,534	+		PFLU_RS08395	0.42	-1.2
1,875,534	+		PFLU_RS08395	0.42	-1.1
1,875,535	-		PFLU_RS08395	0.42	+1.2
1,875,535	-		PFLU_RS08395	0.42	-0.2
1,875,535	-		PFLU_RS08395	0.42	-0.5
1,875,535	-		PFLU_RS08395	0.42	+0.8
1,875,535	-		PFLU_RS08395	0.42	+0.9
1,875,535	-		PFLU_RS08395	0.42	+3.5
1,875,535	-		PFLU_RS08395	0.42	+1.2
1,875,535	-		PFLU_RS08395	0.42	-0.4
1,875,535	-		PFLU_RS08395	0.42	+0.2
1,875,603	+		PFLU_RS08395	0.49	+0.0