Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07770

Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with MOPS
1,729,967	+		PFLU_RS07760	0.85	+1.8
1,729,991	+		PFLU_RS07760	0.89	+2.2
1,729,991	+		PFLU_RS07760	0.89	-0.6
1,729,992	-		PFLU_RS07760	0.89	+2.1
1,729,992	-		PFLU_RS07760	0.89	+0.8
1,730,023	+				-0.4
1,730,023	+				-2.2
1,730,024	-				-1.1
1,730,024	-				+1.9
1,730,024	-				+0.2
1,730,099	+				+1.8
1,730,099	+				-1.0
1,730,099	+				+0.3
1,730,099	+				-0.3
1,730,100	-				-1.4
1,730,100	-				-1.4
1,730,100	-				-1.8
1,730,100	-				-0.9
1,730,100	-				+1.7
1,730,100	-				+0.4
1,730,100	-				-2.1
1,730,100	-				+1.5
1,730,100	-				+0.2
1,730,100	-				+0.8
1,730,101	+				+1.6
1,730,101	+				+1.3
1,730,101	+				+0.4
1,730,101	+				+0.1
1,730,102	-				-0.8
1,730,102	-				-0.1
1,730,102	-				+0.4
1,730,142	+				-1.4
1,730,142	+				-0.4
1,730,142	+				-0.2
1,730,143	-				-0.2
1,730,143	-				+0.4
1,730,143	-				+1.1
1,730,143	-				-1.5
1,730,143	-				+0.1
1,730,147	+				+0.1
1,730,147	+				+0.1
1,730,147	+				-0.6
1,730,147	+				+0.7
1,730,147	+				-1.9
1,730,147	+				-1.9
1,730,147	+				-0.6
1,730,148	-				+0.3
1,730,148	-				-1.2
1,730,148	-				-0.8
1,730,148	-				-0.9
1,730,148	-				+1.8
1,730,148	-				-0.2
1,730,148	-				+0.7
1,730,148	-				-1.1
1,730,148	-				-0.8
1,730,148	-				+0.4
1,730,179	+				+1.6
1,730,179	+				+0.6
1,730,179	+				-0.9
1,730,179	+				+2.4
1,730,179	+				+1.2
1,730,179	+				-2.1
1,730,179	+				-1.8
1,730,180	-				-2.3
1,730,180	-				+3.0
1,730,180	-				+0.8
1,730,180	-				+0.1
1,730,204	+				-0.2
1,730,204	+				+1.4
1,730,205	-				-0.3
1,730,233	-				+0.2
1,730,233	-				-1.3
1,730,233	-				+0.9
1,730,233	-				-2.1
1,730,302	+		PFLU_RS07765	0.16	+0.1
1,730,302	+		PFLU_RS07765	0.16	+1.4
1,730,302	+		PFLU_RS07765	0.16	-0.9
1,730,302	+		PFLU_RS07765	0.16	+0.5
1,730,302	+		PFLU_RS07765	0.16	-0.5
1,730,302	+		PFLU_RS07765	0.16	-1.9
1,730,302	+		PFLU_RS07765	0.16	-0.9
1,730,302	+		PFLU_RS07765	0.16	-0.6
1,730,303	-		PFLU_RS07765	0.16	-1.9
1,730,303	-		PFLU_RS07765	0.16	-0.2
1,730,303	-		PFLU_RS07765	0.16	+0.7
1,730,303	-		PFLU_RS07765	0.16	+0.4
1,730,344	-		PFLU_RS07765	0.24	-1.7
1,730,396	+		PFLU_RS07765	0.34	-0.4
1,730,396	+		PFLU_RS07765	0.34	-2.2
1,730,396	+		PFLU_RS07765	0.34	-0.6
1,730,396	+		PFLU_RS07765	0.34	-0.3
1,730,396	+		PFLU_RS07765	0.34	-0.4
1,730,396	+		PFLU_RS07765	0.34	-1.3
1,730,396	+		PFLU_RS07765	0.34	-1.9
1,730,397	-		PFLU_RS07765	0.34	-1.7
1,730,423	+		PFLU_RS07765	0.39	+0.8
1,730,423	+		PFLU_RS07765	0.39	-2.1
1,730,424	-		PFLU_RS07765	0.40	-0.3
1,730,424	-		PFLU_RS07765	0.40	+0.8
1,730,424	-		PFLU_RS07765	0.40	-1.4
1,730,560	-		PFLU_RS07765	0.66	-0.3
1,730,560	-		PFLU_RS07765	0.66	-0.4
1,730,581	-		PFLU_RS07765	0.70	-0.5
1,730,581	-		PFLU_RS07765	0.70	+0.1
1,730,581	-		PFLU_RS07765	0.70	+0.8
1,730,602	-		PFLU_RS07765	0.74	-0.2
1,730,606	+		PFLU_RS07765	0.75	-1.2
1,730,606	+		PFLU_RS07765	0.75	-0.3
1,730,606	+		PFLU_RS07765	0.75	-0.2
1,730,606	+		PFLU_RS07765	0.75	-1.8
1,730,607	-		PFLU_RS07765	0.75	+0.1
1,730,607	-		PFLU_RS07765	0.75	-0.8
1,730,607	-		PFLU_RS07765	0.75	-1.4
1,730,607	-		PFLU_RS07765	0.75	-2.0
1,730,607	-		PFLU_RS07765	0.75	+0.8
1,730,695	+				-1.8
1,730,695	+				-0.6
1,730,747	-				+0.1
1,730,759	-				+1.2
1,730,768	+				-1.4
1,730,768	+				-0.2
1,730,783	+				+0.8
1,730,783	+				+1.4
1,730,783	+				+1.4
1,730,784	-				+0.4
1,730,784	-				+1.1
1,730,787	+				-1.5
1,730,848	+				-0.4
1,730,848	+				+1.7
1,730,848	+				-0.4
1,730,848	+				+2.8
1,730,848	+				+0.4
1,730,848	+				+2.4
1,730,848	+				+1.2
1,730,848	+				+2.2
1,730,848	+				+5.2
1,730,848	+				-0.2
1,730,848	+				+1.7
1,730,848	+				+0.1
1,730,848	+				+3.8
1,730,848	+				+0.8
1,730,848	+				-0.4
1,730,848	+				+2.0
1,730,848	+				+0.1
1,730,848	+				+1.4
1,730,848	+				+0.7
1,730,848	+				+2.4
1,730,848	+				+0.8
1,730,849	-				+1.9
1,730,849	-				+0.8
1,730,849	-				+0.6
1,730,849	-				-0.8
1,730,849	-				+0.4
1,730,849	-				+1.2
1,730,849	-				+1.5
1,730,849	-				+0.8
1,730,849	-				-0.2
1,730,849	-				+2.0
1,730,849	-				+2.2
1,730,849	-				+1.4
1,730,849	-				-0.6
1,730,849	-				+1.7
1,730,849	-				+1.1
1,730,860	+				+3.4
1,730,860	+				-1.2
1,730,860	+				+3.2
1,730,860	+				+2.4
1,730,860	+				-0.8
1,730,860	+				+0.7
1,730,860	+				-2.1
1,730,860	+				-0.7
1,730,860	+				-1.4
1,730,860	+				-1.2
1,730,860	+				-0.9
1,730,860	+				-1.6
1,730,860	+				+1.4
1,730,860	+				+1.5
1,730,860	+				-1.2
1,730,861	-				+0.8
1,730,861	-				-0.2
1,730,861	-				+1.9
1,730,861	-				+0.8
1,730,861	-				+0.5
1,730,861	-				-0.8
1,730,861	-				+1.1
1,730,861	-				+0.4
1,730,861	-				+0.6
1,730,861	-				+1.8
1,730,861	-				+1.2
1,730,938	+		PFLU_RS07770	0.16	+1.7
1,730,938	+		PFLU_RS07770	0.16	+0.4
1,730,938	+		PFLU_RS07770	0.16	+1.8
1,730,938	+		PFLU_RS07770	0.16	+1.0
1,730,938	+		PFLU_RS07770	0.16	+2.4
1,730,938	+		PFLU_RS07770	0.16	+1.4
1,730,939	-		PFLU_RS07770	0.16	+4.4
1,730,939	-		PFLU_RS07770	0.16	+0.5
1,730,939	-		PFLU_RS07770	0.16	-0.2
1,730,939	-		PFLU_RS07770	0.16	+2.4
1,730,939	-		PFLU_RS07770	0.16	+0.4
1,730,939	-		PFLU_RS07770	0.16	-1.1
1,730,939	-		PFLU_RS07770	0.16	-1.1
1,730,939	-		PFLU_RS07770	0.16	+2.1
1,730,939	-		PFLU_RS07770	0.16	+1.6
1,730,939	-		PFLU_RS07770	0.16	-0.9
1,731,073	+		PFLU_RS07770	0.32	+1.5
1,731,073	+		PFLU_RS07770	0.32	+0.6
1,731,073	+		PFLU_RS07770	0.32	-0.4
1,731,074	-		PFLU_RS07770	0.33	+0.2
1,731,074	-		PFLU_RS07770	0.33	+3.4
1,731,074	-		PFLU_RS07770	0.33	+2.2
1,731,074	-		PFLU_RS07770	0.33	+2.8
1,731,177	+		PFLU_RS07770	0.45	+0.4
1,731,178	-		PFLU_RS07770	0.45	+0.3
1,731,178	-		PFLU_RS07770	0.45	+1.9
1,731,213	-		PFLU_RS07770	0.49	+3.1
1,731,213	-		PFLU_RS07770	0.49	+1.7
1,731,213	-		PFLU_RS07770	0.49	+2.2
1,731,250	-		PFLU_RS07770	0.54	+1.2
1,731,265	+		PFLU_RS07770	0.56	-0.9
1,731,265	+		PFLU_RS07770	0.56	+3.0
1,731,265	+		PFLU_RS07770	0.56	+1.2
1,731,265	+		PFLU_RS07770	0.56	+2.1
1,731,265	+		PFLU_RS07770	0.56	-1.5
1,731,265	+		PFLU_RS07770	0.56	+2.7
1,731,265	+		PFLU_RS07770	0.56	-0.4
1,731,265	+		PFLU_RS07770	0.56	-0.2
1,731,266	-		PFLU_RS07770	0.56	+1.6
1,731,266	-		PFLU_RS07770	0.56	+1.2
1,731,266	-		PFLU_RS07770	0.56	-1.3
1,731,266	-		PFLU_RS07770	0.56	+2.1
1,731,266	-		PFLU_RS07770	0.56	+1.3
1,731,266	-		PFLU_RS07770	0.56	+1.4
1,731,266	-		PFLU_RS07770	0.56	+2.2
1,731,266	-		PFLU_RS07770	0.56	-0.2
1,731,266	-		PFLU_RS07770	0.56	+1.4
1,731,266	-		PFLU_RS07770	0.56	-0.8
1,731,266	-		PFLU_RS07770	0.56	+0.4
1,731,266	-		PFLU_RS07770	0.56	+0.3
1,731,398	-		PFLU_RS07770	0.72	+0.7
1,731,398	-		PFLU_RS07770	0.72	+0.8
1,731,398	-		PFLU_RS07770	0.72	+0.6
1,731,398	-		PFLU_RS07770	0.72	+0.1
1,731,398	-		PFLU_RS07770	0.72	-0.3
1,731,436	+		PFLU_RS07770	0.76	+2.5
1,731,436	+		PFLU_RS07770	0.76	+3.5
1,731,436	+		PFLU_RS07770	0.76	+3.7
1,731,436	+		PFLU_RS07770	0.76	+0.4
1,731,436	+		PFLU_RS07770	0.76	+3.0
1,731,436	+		PFLU_RS07770	0.76	-0.2
1,731,436	+		PFLU_RS07770	0.76	+0.8
1,731,436	+		PFLU_RS07770	0.76	+0.6
1,731,437	-		PFLU_RS07770	0.76	-1.4
1,731,437	-		PFLU_RS07770	0.76	-0.8
1,731,437	-		PFLU_RS07770	0.76	+0.8
1,731,437	-		PFLU_RS07770	0.76	+0.8
1,731,437	-		PFLU_RS07770	0.76	+0.4
1,731,538	+		PFLU_RS07770	0.88	+2.4
1,731,538	+		PFLU_RS07770	0.88	-0.5
1,731,538	+		PFLU_RS07770	0.88	-1.8
1,731,538	+		PFLU_RS07770	0.88	-0.2
1,731,539	-		PFLU_RS07770	0.89	-0.2
1,731,539	-		PFLU_RS07770	0.89	+2.7
1,731,539	-		PFLU_RS07770	0.89	+0.3
1,731,539	-		PFLU_RS07770	0.89	+1.9
1,731,539	-		PFLU_RS07770	0.89	+2.6
1,731,539	-		PFLU_RS07770	0.89	+0.6
1,731,547	+		PFLU_RS07770	0.90	-1.2
1,731,547	+		PFLU_RS07770	0.90	+3.0
1,731,547	+		PFLU_RS07770	0.90	+0.8
1,731,547	+		PFLU_RS07770	0.90	+2.2
1,731,547	+		PFLU_RS07770	0.90	-1.2
1,731,548	-		PFLU_RS07770	0.90	+1.7
1,731,548	-		PFLU_RS07770	0.90	+3.3
1,731,570	+				-0.2
1,731,588	+				+1.4
1,731,588	+				-1.2
1,731,631	+				-0.7
1,731,632	-				+0.5
1,731,697	+				-1.7
1,731,697	+				+0.8
1,731,698	-				+0.5
1,731,728	+		PFLU_RS07775	0.12	-0.4
1,731,728	+		PFLU_RS07775	0.12	+1.5
1,731,728	+		PFLU_RS07775	0.12	+1.4
1,731,728	+		PFLU_RS07775	0.12	+1.2
1,731,728	+		PFLU_RS07775	0.12	-0.6
1,731,729	-		PFLU_RS07775	0.12	+2.1
1,731,729	-		PFLU_RS07775	0.12	+2.2
1,731,774	+		PFLU_RS07775	0.29	-0.9
1,731,774	+		PFLU_RS07775	0.29	-0.6
1,731,774	+		PFLU_RS07775	0.29	-0.6
1,731,775	-		PFLU_RS07775	0.30	+2.4
1,731,775	-		PFLU_RS07775	0.30	+1.0
1,731,775	-		PFLU_RS07775	0.30	+2.2
1,731,803	+		PFLU_RS07775	0.40	-1.3
1,731,803	+		PFLU_RS07775	0.40	-0.6
1,731,804	-		PFLU_RS07775	0.40	+2.4
1,731,840	+		PFLU_RS07775	0.54	+0.1
1,731,840	+		PFLU_RS07775	0.54	-0.7
1,731,841	-		PFLU_RS07775	0.54	+0.1
1,731,977	+				+0.4
1,731,977	+				-0.4
1,731,977	+				-0.1
1,731,977	+				+0.1
1,731,977	+				-1.8
1,731,978	-				-1.3
1,731,978	-				-0.7
1,731,983	+				+0.6
1,731,995	+				+0.1
1,731,995	+				+0.5
1,731,995	+				-1.9
1,731,995	+				+1.1
1,731,995	+				+1.4
1,731,996	-				+0.8
1,731,996	-				+1.1
1,732,022	-				-0.8
1,732,022	-				-0.2
1,732,035	+				+0.8
1,732,035	+				-0.8
1,732,035	+				+1.1
1,732,035	+				+0.3
1,732,035	+				+2.7
1,732,035	+				-2.2
1,732,036	-				-1.1
1,732,036	-				+1.6
1,732,036	-				-0.2
1,732,036	-				-0.6
1,732,036	-				-0.9
1,732,036	-				-0.8
1,732,040	+				-1.4
1,732,040	+				+1.9
1,732,170	+		PFLU_RS07780	0.16	-0.6
1,732,170	+		PFLU_RS07780	0.16	-1.1
1,732,170	+		PFLU_RS07780	0.16	-1.5
1,732,171	-		PFLU_RS07780	0.16	+1.5
1,732,171	-		PFLU_RS07780	0.16	+1.2
1,732,171	-		PFLU_RS07780	0.16	-1.6
1,732,171	-		PFLU_RS07780	0.16	+1.1