Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16780

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
3,806,084	+				+1.8
3,806,084	+				+2.4
3,806,084	+				-2.4
3,806,084	+				+4.1
3,806,085	-				+2.0
3,806,085	-				+2.3
3,806,085	-				-0.2
3,806,085	-				+0.3
3,806,085	-				+1.0
3,806,085	-				-0.6
3,806,085	-				-0.2
3,806,132	+				+0.8
3,806,133	-				-1.1
3,806,136	+				-0.8
3,806,136	+				+1.6
3,806,136	+				+0.8
3,806,136	+				-3.3
3,806,136	+				+1.0
3,806,136	+				-2.3
3,806,136	+				+0.8
3,806,136	+				+1.2
3,806,136	+				+1.9
3,806,136	+				+2.8
3,806,136	+				-1.5
3,806,136	+				-0.2
3,806,137	-				+2.0
3,806,137	-				-1.2
3,806,137	-				-0.9
3,806,137	-				-0.2
3,806,137	-				-1.7
3,806,137	-				+3.2
3,806,137	-				-1.7
3,806,137	-				+1.0
3,806,137	-				-1.4
3,806,137	-				+1.0
3,806,137	-				+1.2
3,806,137	-				-0.0
3,806,137	-				+0.3
3,806,137	-				+2.1
3,806,140	+				+0.9
3,806,141	-				-1.2
3,806,141	-				-0.2
3,806,141	-				-0.2
3,806,209	+				+2.2
3,806,209	+				+2.8
3,806,210	-				+1.9
3,806,214	-				+1.0
3,806,214	-				-1.6
3,806,220	+				+1.5
3,806,220	+				-0.8
3,806,220	+				-1.8
3,806,220	+				+0.1
3,806,220	+				+0.4
3,806,220	+				-1.0
3,806,220	+				+0.8
3,806,220	+				-0.6
3,806,221	-				+1.2
3,806,221	-				+1.8
3,806,221	-				+2.3
3,806,221	-				-0.6
3,806,221	-				+1.3
3,806,221	-				+1.6
3,806,224	+				+1.3
3,806,257	+				+0.1
3,806,257	+				+1.0
3,806,257	+				-0.4
3,806,271	+				-1.7
3,806,300	+				+0.3
3,806,300	+				-0.2
3,806,300	+				-0.9
3,806,300	+				-2.0
3,806,300	+				+2.5
3,806,300	+				-1.0
3,806,300	+				+1.3
3,806,300	+				-2.6
3,806,300	+				-2.2
3,806,300	+				-1.6
3,806,300	+				+0.1
3,806,300	+				+1.3
3,806,300	+				+0.7
3,806,300	+				+3.8
3,806,300	+				-1.2
3,806,300	+				+2.3
3,806,300	+				+0.2
3,806,300	+				+0.6
3,806,300	+				-0.2
3,806,301	-				-0.4
3,806,301	-				-1.9
3,806,301	-				-0.7
3,806,301	-				+0.5
3,806,301	-				-1.1
3,806,301	-				-2.2
3,806,301	-				+0.2
3,806,301	-				-0.6
3,806,301	-				+0.8
3,806,301	-				+0.2
3,806,301	-				+3.1
3,806,301	-				-0.8
3,806,301	-				-1.0
3,806,301	-				+0.3
3,806,301	-				+0.8
3,806,301	-				-1.4
3,806,301	-				+1.8
3,806,301	-				+1.2
3,806,301	-				+1.4
3,806,301	-				+1.8
3,806,301	-				-0.1
3,806,302	+				-1.8
3,806,302	+				-1.6
3,806,302	+				+0.2
3,806,302	+				+0.3
3,806,302	+				-2.0
3,806,302	+				+0.6
3,806,302	+				+1.5
3,806,302	+				+0.8
3,806,302	+				+0.5
3,806,302	+				+0.2
3,806,302	+				-1.9
3,806,302	+				+1.9
3,806,302	+				+1.2
3,806,302	+				+2.1
3,806,302	+				+1.2
3,806,303	-				+2.1
3,806,303	-				+2.8
3,806,303	-				-0.2
3,806,303	-				-0.2
3,806,303	-				-1.6
3,806,303	-				-0.6
3,806,303	-				+1.8
3,806,303	-				-0.9
3,806,303	-				-0.6
3,806,303	-				+1.1
3,806,303	-				+0.8
3,806,303	-				+0.2
3,806,303	-				-0.8
3,806,303	-				+1.3
3,806,391	+		PFLU_RS16775	0.11	+3.0
3,806,391	+		PFLU_RS16775	0.11	+1.5
3,806,478	+		PFLU_RS16775	0.28	-0.7
3,806,478	+		PFLU_RS16775	0.28	+1.9
3,806,479	-		PFLU_RS16775	0.28	-0.2
3,806,479	-		PFLU_RS16775	0.28	-1.0
3,806,479	-		PFLU_RS16775	0.28	+1.7
3,806,543	-		PFLU_RS16775	0.40	-0.8
3,806,543	-		PFLU_RS16775	0.40	+0.8
3,806,543	-		PFLU_RS16775	0.40	-1.9
3,806,543	-		PFLU_RS16775	0.40	-0.8
3,806,605	+		PFLU_RS16775	0.52	+1.0
3,806,605	+		PFLU_RS16775	0.52	+0.4
3,806,605	+		PFLU_RS16775	0.52	+4.2
3,806,605	+		PFLU_RS16775	0.52	-0.8
3,806,606	-		PFLU_RS16775	0.52	+1.8
3,806,680	+		PFLU_RS16775	0.66	+0.3
3,806,833	+				-0.8
3,806,918	+				-1.7
3,806,929	+				-2.3
3,806,929	+				-0.6
3,806,946	+				+4.3
3,807,003	-				-1.7
3,807,023	+				-1.9
3,807,023	+				-1.8
3,807,023	+				-1.2
3,807,024	-				-0.6
3,807,024	-				-1.0
3,807,024	-				-2.0
3,807,027	+				-1.9
3,807,027	+				+0.2
3,807,028	-				+0.8
3,807,028	-				-2.5
3,807,163	+				+1.8
3,807,163	+				-1.2
3,807,163	+				-1.6
3,807,164	-				-1.4
3,807,164	-				-1.0
3,807,164	-				-1.0
3,807,206	+		PFLU_RS16780	0.13	-1.4
3,807,206	+		PFLU_RS16780	0.13	-1.4
3,807,206	+		PFLU_RS16780	0.13	-0.2
3,807,207	-		PFLU_RS16780	0.13	-2.9
3,807,207	-		PFLU_RS16780	0.13	+0.8
3,807,207	-		PFLU_RS16780	0.13	-1.2
3,807,228	+		PFLU_RS16780	0.14	-1.2
3,807,291	+		PFLU_RS16780	0.18	+0.8
3,807,291	+		PFLU_RS16780	0.18	-2.1
3,807,292	-		PFLU_RS16780	0.18	-2.6
3,807,292	-		PFLU_RS16780	0.18	-2.3
3,807,292	-		PFLU_RS16780	0.18	-0.2
3,807,295	+		PFLU_RS16780	0.19	-0.8
3,807,295	+		PFLU_RS16780	0.19	-0.6
3,807,296	-		PFLU_RS16780	0.19	+0.2
3,807,296	-		PFLU_RS16780	0.19	-2.0
3,807,296	-		PFLU_RS16780	0.19	-2.1
3,807,296	-		PFLU_RS16780	0.19	-1.9
3,807,312	-		PFLU_RS16780	0.20	-1.8
3,807,374	-		PFLU_RS16780	0.24	-0.8
3,807,407	+		PFLU_RS16780	0.26	-2.9
3,807,407	+		PFLU_RS16780	0.26	-1.7
3,807,407	+		PFLU_RS16780	0.26	-0.6
3,807,408	-		PFLU_RS16780	0.26	-2.1
3,807,408	-		PFLU_RS16780	0.26	-0.6
3,807,408	-		PFLU_RS16780	0.26	-1.6
3,807,408	-		PFLU_RS16780	0.26	+0.2
3,807,451	+		PFLU_RS16780	0.29	-1.6
3,807,451	+		PFLU_RS16780	0.29	-3.0
3,807,451	+		PFLU_RS16780	0.29	-0.6
3,807,451	+		PFLU_RS16780	0.29	-1.7
3,807,451	+		PFLU_RS16780	0.29	-0.2
3,807,452	-		PFLU_RS16780	0.29	-0.6
3,807,452	-		PFLU_RS16780	0.29	+0.8
3,807,452	-		PFLU_RS16780	0.29	-1.2
3,807,481	+		PFLU_RS16780	0.31	-0.6
3,807,481	+		PFLU_RS16780	0.31	-2.8
3,807,482	-		PFLU_RS16780	0.31	+0.5
3,807,569	+		PFLU_RS16780	0.37	-0.8
3,807,570	-		PFLU_RS16780	0.37	-2.7
3,807,570	-		PFLU_RS16780	0.37	-2.3
3,807,664	+		PFLU_RS16780	0.43	-0.2
3,807,664	+		PFLU_RS16780	0.43	-0.8
3,807,841	+		PFLU_RS16780	0.55	-2.0
3,807,841	+		PFLU_RS16780	0.55	-0.6
3,807,841	+		PFLU_RS16780	0.55	-2.0
3,807,841	+		PFLU_RS16780	0.55	-3.1
3,807,841	+		PFLU_RS16780	0.55	-1.8
3,807,841	+		PFLU_RS16780	0.55	-0.8
3,807,842	-		PFLU_RS16780	0.55	-1.9
3,807,842	-		PFLU_RS16780	0.55	-1.0
3,807,842	-		PFLU_RS16780	0.55	-0.8
3,807,842	-		PFLU_RS16780	0.55	-0.2
3,807,842	-		PFLU_RS16780	0.55	-2.7
3,807,842	-		PFLU_RS16780	0.55	-2.3
3,807,842	-		PFLU_RS16780	0.55	-2.4
3,807,844	+		PFLU_RS16780	0.55	-0.2
3,807,844	+		PFLU_RS16780	0.55	-2.1
3,807,844	+		PFLU_RS16780	0.55	-0.7
3,807,844	+		PFLU_RS16780	0.55	-2.9
3,807,844	+		PFLU_RS16780	0.55	-2.0
3,807,844	+		PFLU_RS16780	0.55	-1.0
3,807,844	+		PFLU_RS16780	0.55	-1.4
3,807,844	+		PFLU_RS16780	0.55	-0.8
3,807,844	+		PFLU_RS16780	0.55	-0.2
3,807,844	+		PFLU_RS16780	0.55	+0.2
3,807,844	+		PFLU_RS16780	0.55	+3.7
3,807,844	+		PFLU_RS16780	0.55	+0.2
3,807,844	+		PFLU_RS16780	0.55	-2.1
3,807,844	+		PFLU_RS16780	0.55	-1.7
3,807,844	+		PFLU_RS16780	0.55	-1.4
3,807,844	+		PFLU_RS16780	0.55	-1.4
3,807,844	+		PFLU_RS16780	0.55	-3.1
3,807,844	+		PFLU_RS16780	0.55	-2.5
3,807,844	+		PFLU_RS16780	0.55	-2.3
3,807,844	+		PFLU_RS16780	0.55	-2.4
3,807,844	+		PFLU_RS16780	0.55	-2.6
3,807,844	+		PFLU_RS16780	0.55	-0.6
3,807,844	+		PFLU_RS16780	0.55	-0.6
3,807,845	-		PFLU_RS16780	0.55	-1.2
3,807,845	-		PFLU_RS16780	0.55	-1.9
3,807,845	-		PFLU_RS16780	0.55	-1.9
3,807,845	-		PFLU_RS16780	0.55	-2.1
3,807,845	-		PFLU_RS16780	0.55	-1.0
3,807,845	-		PFLU_RS16780	0.55	-2.0
3,807,845	-		PFLU_RS16780	0.55	-1.7
3,807,845	-		PFLU_RS16780	0.55	-0.6
3,807,845	-		PFLU_RS16780	0.55	-0.6
3,807,845	-		PFLU_RS16780	0.55	-2.6
3,807,845	-		PFLU_RS16780	0.55	-3.2
3,807,845	-		PFLU_RS16780	0.55	-0.8
3,807,845	-		PFLU_RS16780	0.55	+0.8
3,807,845	-		PFLU_RS16780	0.55	-0.2
3,807,845	-		PFLU_RS16780	0.55	-0.9
3,807,845	-		PFLU_RS16780	0.55	-0.6
3,807,845	-		PFLU_RS16780	0.55	-2.2
3,807,845	-		PFLU_RS16780	0.55	+0.2
3,807,845	-		PFLU_RS16780	0.55	-1.4
3,807,845	-		PFLU_RS16780	0.55	-0.8
3,807,845	-		PFLU_RS16780	0.55	-2.6
3,807,859	+		PFLU_RS16780	0.56	-0.8
3,807,859	+		PFLU_RS16780	0.56	-2.4
3,807,859	+		PFLU_RS16780	0.56	-0.0
3,807,859	+		PFLU_RS16780	0.56	-0.6
3,807,859	+		PFLU_RS16780	0.56	-0.2
3,807,859	+		PFLU_RS16780	0.56	-0.6
3,807,859	+		PFLU_RS16780	0.56	-1.7
3,807,859	+		PFLU_RS16780	0.56	-1.4
3,807,859	+		PFLU_RS16780	0.56	+1.8
3,807,859	+		PFLU_RS16780	0.56	-1.6
3,807,859	+		PFLU_RS16780	0.56	-3.3
3,807,859	+		PFLU_RS16780	0.56	-2.4
3,807,859	+		PFLU_RS16780	0.56	-2.5
3,807,859	+		PFLU_RS16780	0.56	-1.2
3,807,859	+		PFLU_RS16780	0.56	-2.2
3,807,860	-		PFLU_RS16780	0.56	-1.2
3,807,860	-		PFLU_RS16780	0.56	+0.2
3,807,860	-		PFLU_RS16780	0.56	-1.2
3,807,860	-		PFLU_RS16780	0.56	-0.2
3,807,860	-		PFLU_RS16780	0.56	-0.8
3,807,860	-		PFLU_RS16780	0.56	-1.7
3,807,860	-		PFLU_RS16780	0.56	-2.6
3,807,860	-		PFLU_RS16780	0.56	-2.6
3,807,860	-		PFLU_RS16780	0.56	+0.2
3,807,860	-		PFLU_RS16780	0.56	+0.2
3,807,860	-		PFLU_RS16780	0.56	-0.2
3,807,860	-		PFLU_RS16780	0.56	-2.8
3,807,860	-		PFLU_RS16780	0.56	-2.6
3,807,860	-		PFLU_RS16780	0.56	-1.9
3,807,860	-		PFLU_RS16780	0.56	-1.0
3,807,860	-		PFLU_RS16780	0.56	-2.7
3,807,860	-		PFLU_RS16780	0.56	-1.0
3,807,860	-		PFLU_RS16780	0.56	-1.2
3,807,871	+		PFLU_RS16780	0.57	+0.8
3,807,871	+		PFLU_RS16780	0.57	-2.1
3,807,871	+		PFLU_RS16780	0.57	-1.9
3,807,871	+		PFLU_RS16780	0.57	-1.2
3,807,871	+		PFLU_RS16780	0.57	-0.8
3,807,871	+		PFLU_RS16780	0.57	-0.8
3,807,872	-		PFLU_RS16780	0.57	-0.8
3,807,872	-		PFLU_RS16780	0.57	-2.3
3,807,872	-		PFLU_RS16780	0.57	-2.3
3,807,872	-		PFLU_RS16780	0.57	-2.2
3,807,872	-		PFLU_RS16780	0.57	-2.4
3,807,892	+		PFLU_RS16780	0.58	+0.6
3,807,892	+		PFLU_RS16780	0.58	-1.0
3,807,892	+		PFLU_RS16780	0.58	-1.4
3,807,892	+		PFLU_RS16780	0.58	-0.8
3,807,893	-		PFLU_RS16780	0.58	-1.6
3,807,893	-		PFLU_RS16780	0.58	-0.6
3,807,893	-		PFLU_RS16780	0.58	-0.8
3,807,978	+		PFLU_RS16780	0.64	-1.2
3,807,978	+		PFLU_RS16780	0.64	-2.7
3,807,978	+		PFLU_RS16780	0.64	-1.6
3,807,979	-		PFLU_RS16780	0.64	-0.6
3,808,047	+		PFLU_RS16780	0.69	-2.5
3,808,047	+		PFLU_RS16780	0.69	-1.8
3,808,047	+		PFLU_RS16780	0.69	-1.7
3,808,047	+		PFLU_RS16780	0.69	-1.4
3,808,047	+		PFLU_RS16780	0.69	-2.8
3,808,047	+		PFLU_RS16780	0.69	-2.6
3,808,047	+		PFLU_RS16780	0.69	-0.6
3,808,047	+		PFLU_RS16780	0.69	-1.4
3,808,047	+		PFLU_RS16780	0.69	-1.4
3,808,047	+		PFLU_RS16780	0.69	-1.9
3,808,047	+		PFLU_RS16780	0.69	-1.0
3,808,047	+		PFLU_RS16780	0.69	-0.8
3,808,048	-		PFLU_RS16780	0.69	-2.9
3,808,048	-		PFLU_RS16780	0.69	-0.8
3,808,048	-		PFLU_RS16780	0.69	-2.8
3,808,048	-		PFLU_RS16780	0.69	-2.1
3,808,048	-		PFLU_RS16780	0.69	-1.4
3,808,048	-		PFLU_RS16780	0.69	-0.2
3,808,175	-		PFLU_RS16780	0.77	-1.0
3,808,175	-		PFLU_RS16780	0.77	-0.7
3,808,223	+		PFLU_RS16780	0.80	-1.7
3,808,270	+		PFLU_RS16780	0.83	-3.1
3,808,270	+		PFLU_RS16780	0.83	-1.8
3,808,270	+		PFLU_RS16780	0.83	-1.2
3,808,270	+		PFLU_RS16780	0.83	-2.6
3,808,270	+		PFLU_RS16780	0.83	-2.7
3,808,270	+		PFLU_RS16780	0.83	-1.4
3,808,270	+		PFLU_RS16780	0.83	-1.2
3,808,271	-		PFLU_RS16780	0.83	-2.2
3,808,271	-		PFLU_RS16780	0.83	-1.8
3,808,271	-		PFLU_RS16780	0.83	+1.8
3,808,271	-		PFLU_RS16780	0.83	-0.6
3,808,271	-		PFLU_RS16780	0.83	-1.6
3,808,271	-		PFLU_RS16780	0.83	-0.8
3,808,271	-		PFLU_RS16780	0.83	-2.2
3,808,271	-		PFLU_RS16780	0.83	-0.8
3,808,282	+		PFLU_RS16780	0.84	-1.4
3,808,283	-		PFLU_RS16780	0.84	-1.0
3,808,283	-		PFLU_RS16780	0.84	-1.9
3,808,285	+		PFLU_RS16780	0.84	-1.4
3,808,285	+		PFLU_RS16780	0.84	-1.0
3,808,285	+		PFLU_RS16780	0.84	-1.2
3,808,285	+		PFLU_RS16780	0.84	-1.8
3,808,286	-		PFLU_RS16780	0.84	-1.8
3,808,286	-		PFLU_RS16780	0.84	-1.9
3,808,286	-		PFLU_RS16780	0.84	-2.8
3,808,286	-		PFLU_RS16780	0.84	-2.1
3,808,286	-		PFLU_RS16780	0.84	-1.9
3,808,512	+				-0.9
3,808,512	+				+1.8
3,808,512	+				-1.8
3,808,513	-				-0.6
3,808,513	-				-2.6
3,808,516	+				-1.6
3,808,516	+				-0.3
3,808,516	+				+0.6
3,808,517	-				-1.6
3,808,517	-				-1.9
3,808,571	+				+3.6
3,808,571	+				+1.2
3,808,571	+				+1.6
3,808,571	+				-1.4
3,808,571	+				+0.2
3,808,571	+				-0.2
3,808,571	+				-0.0
3,808,571	+				+2.9
3,808,571	+				+3.2
3,808,571	+				-1.2
3,808,571	+				-1.0
3,808,571	+				-0.8
3,808,572	-				-1.2
3,808,572	-				-0.8
3,808,572	-				-0.2
3,808,572	-				+0.8
3,808,572	-				+2.2
3,808,572	-				-0.8
3,808,572	-				-0.2
3,808,572	-				-2.2
3,808,572	-				+0.4
3,808,572	-				-1.6
3,808,572	-				-2.5
3,808,572	-				-1.6
3,808,572	-				-2.0
3,808,581	-				-1.4
3,808,639	+		PFLU_RS16785	0.13	-2.8
3,808,640	-		PFLU_RS16785	0.13	-1.2
3,808,909	-		PFLU_RS16785	0.66	-1.9
3,809,043	-				-1.7
3,809,049	+				+0.4
3,809,050	-				-1.2
3,809,050	-				-1.4
3,809,050	-				+0.8
3,809,116	-				-1.0
3,809,142	-				-2.2
3,809,171	+		PFLU_RS16790	0.13	+1.2
3,809,363	+		PFLU_RS16790	0.34	-0.2
3,809,363	+		PFLU_RS16790	0.34	-0.2
3,809,363	+		PFLU_RS16790	0.34	+2.8
3,809,364	-		PFLU_RS16790	0.34	+0.2
3,809,364	-		PFLU_RS16790	0.34	-2.1