Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05005

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,051,631	+		ABZR87_RS05000	0.45	+0.1
1,051,631	+		ABZR87_RS05000	0.45	+0.3
1,051,632	-		ABZR87_RS05000	0.45	-0.4
1,051,632	-		ABZR87_RS05000	0.45	-0.4
1,051,793	+		ABZR87_RS05000	0.62	-0.5
1,051,793	+		ABZR87_RS05000	0.62	-0.8
1,051,952	+		ABZR87_RS05000	0.79	-0.3
1,051,952	+		ABZR87_RS05000	0.79	-0.5
1,051,952	+		ABZR87_RS05000	0.79	-0.7
1,051,953	-		ABZR87_RS05000	0.79	-0.7
1,052,039	+		ABZR87_RS05000	0.89	-1.6
1,052,039	+		ABZR87_RS05000	0.89	-0.7
1,052,039	+		ABZR87_RS05000	0.89	-0.3
1,052,039	+		ABZR87_RS05000	0.89	-0.2
1,052,039	+		ABZR87_RS05000	0.89	-0.2
1,052,039	+		ABZR87_RS05000	0.89	-1.0
1,052,039	+		ABZR87_RS05000	0.89	-0.8
1,052,039	+		ABZR87_RS05000	0.89	-0.2
1,052,039	+		ABZR87_RS05000	0.89	+0.0
1,052,039	+		ABZR87_RS05000	0.89	-0.5
1,052,040	-		ABZR87_RS05000	0.89	+0.4
1,052,040	-		ABZR87_RS05000	0.89	-1.2
1,052,040	-		ABZR87_RS05000	0.89	-0.2
1,052,040	-		ABZR87_RS05000	0.89	-0.1
1,052,040	-		ABZR87_RS05000	0.89	+0.4
1,052,040	-		ABZR87_RS05000	0.89	+0.0
1,052,040	-		ABZR87_RS05000	0.89	-0.6
1,052,160	+				-0.3
1,052,160	+				-0.9
1,052,160	+				-0.2
1,052,161	-				+0.0
1,052,177	+				-1.1
1,052,207	+				+0.0
1,052,208	-				+0.2
1,052,210	+				-1.8
1,052,210	+				-0.2
1,052,211	-				-0.5
1,052,234	+				-0.3
1,052,369	+				-0.5
1,052,369	+				-0.2
1,052,369	+				-0.1
1,052,370	-				-0.5
1,052,628	+				-1.1
1,052,628	+				-1.1
1,052,628	+				-0.8
1,052,629	-				-0.9
1,052,629	-				-1.2
1,052,658	+				+0.3
1,052,658	+				-0.9
1,052,658	+				+0.8
1,052,659	-				+0.2
1,052,659	-				-0.9
1,053,246	+		ABZR87_RS05005	0.38	-0.1
1,053,246	+		ABZR87_RS05005	0.38	+0.0
1,053,246	+		ABZR87_RS05005	0.38	-0.1
1,053,247	-		ABZR87_RS05005	0.38	-1.4
1,053,247	-		ABZR87_RS05005	0.38	-0.0
1,053,247	-		ABZR87_RS05005	0.38	+0.1
1,053,247	-		ABZR87_RS05005	0.38	+0.1
1,053,247	-		ABZR87_RS05005	0.38	+0.1
1,053,247	-		ABZR87_RS05005	0.38	+0.2
1,053,247	-		ABZR87_RS05005	0.38	-0.4
1,053,247	-		ABZR87_RS05005	0.38	+0.1
1,053,307	-		ABZR87_RS05005	0.42	-0.3
1,053,307	-		ABZR87_RS05005	0.42	+0.4
1,053,307	-		ABZR87_RS05005	0.42	-1.4
1,053,383	+		ABZR87_RS05005	0.46	-0.6
1,053,383	+		ABZR87_RS05005	0.46	-0.3
1,053,383	+		ABZR87_RS05005	0.46	-0.3
1,053,383	+		ABZR87_RS05005	0.46	-0.3
1,053,384	-		ABZR87_RS05005	0.47	-0.1
1,053,384	-		ABZR87_RS05005	0.47	-0.2
1,053,420	+		ABZR87_RS05005	0.49	-0.3
1,053,420	+		ABZR87_RS05005	0.49	+0.5
1,053,421	-		ABZR87_RS05005	0.49	+1.0
1,053,421	-		ABZR87_RS05005	0.49	-0.0
1,053,421	-		ABZR87_RS05005	0.49	-0.3
1,053,447	+		ABZR87_RS05005	0.50	-0.3
1,053,448	-		ABZR87_RS05005	0.50	-2.4
1,053,489	+		ABZR87_RS05005	0.53	-0.4
1,053,507	+		ABZR87_RS05005	0.54	-1.1
1,053,507	+		ABZR87_RS05005	0.54	-0.7
1,053,507	+		ABZR87_RS05005	0.54	-0.8
1,053,508	-		ABZR87_RS05005	0.54	+1.3
1,053,508	-		ABZR87_RS05005	0.54	+0.2
1,053,561	+		ABZR87_RS05005	0.57	+1.2
1,053,562	-		ABZR87_RS05005	0.57	+0.4
1,053,669	+		ABZR87_RS05005	0.63	+0.6
1,053,669	+		ABZR87_RS05005	0.63	-1.4
1,053,669	+		ABZR87_RS05005	0.63	-0.3
1,053,669	+		ABZR87_RS05005	0.63	-0.6
1,053,669	+		ABZR87_RS05005	0.63	+0.2
1,053,670	-		ABZR87_RS05005	0.63	+0.2
1,053,670	-		ABZR87_RS05005	0.63	-0.7
1,053,670	-		ABZR87_RS05005	0.63	+0.2
1,053,682	-		ABZR87_RS05005	0.64	-0.8
1,053,682	-		ABZR87_RS05005	0.64	-0.6
1,053,682	-		ABZR87_RS05005	0.64	-0.7
1,053,701	+		ABZR87_RS05005	0.65	-0.8
1,053,701	+		ABZR87_RS05005	0.65	-0.2
1,053,701	+		ABZR87_RS05005	0.65	-0.4
1,053,701	+		ABZR87_RS05005	0.65	-0.8
1,053,701	+		ABZR87_RS05005	0.65	+0.4
1,053,702	-		ABZR87_RS05005	0.65	-0.7
1,053,702	-		ABZR87_RS05005	0.65	-1.3
1,053,702	-		ABZR87_RS05005	0.65	-0.5
1,053,702	-		ABZR87_RS05005	0.65	+0.3
1,053,702	-		ABZR87_RS05005	0.65	+0.8
1,053,702	-		ABZR87_RS05005	0.65	-0.5
1,053,702	-		ABZR87_RS05005	0.65	+0.5
1,053,775	+		ABZR87_RS05005	0.70	-1.6
1,053,775	+		ABZR87_RS05005	0.70	-0.9
1,053,775	+		ABZR87_RS05005	0.70	-0.9
1,053,775	+		ABZR87_RS05005	0.70	-0.4
1,053,776	-		ABZR87_RS05005	0.70	+0.2
1,053,776	-		ABZR87_RS05005	0.70	-0.1
1,053,776	-		ABZR87_RS05005	0.70	-1.4
1,053,776	-		ABZR87_RS05005	0.70	-1.3
1,053,776	-		ABZR87_RS05005	0.70	-0.1
1,053,864	+		ABZR87_RS05005	0.75	+0.2
1,053,864	+		ABZR87_RS05005	0.75	-0.3
1,053,864	+		ABZR87_RS05005	0.75	-1.1
1,053,865	-		ABZR87_RS05005	0.75	-0.4
1,053,865	-		ABZR87_RS05005	0.75	-0.5
1,053,951	+		ABZR87_RS05005	0.80	-0.2
1,053,952	-		ABZR87_RS05005	0.80	-0.2
1,053,952	-		ABZR87_RS05005	0.80	-0.5
1,053,999	+		ABZR87_RS05005	0.83	-0.1
1,054,000	-		ABZR87_RS05005	0.83	-0.5
1,054,000	-		ABZR87_RS05005	0.83	+0.2
1,054,185	+				+0.1
1,054,185	+				-0.7
1,054,185	+				+0.1
1,054,185	+				-0.4
1,054,186	-				+1.0
1,054,187	-				-1.2
1,054,421	-				-1.4
1,054,492	+		ABZR87_RS05010	0.14	+0.0
1,054,493	-		ABZR87_RS05010	0.14	-0.1
1,054,493	-		ABZR87_RS05010	0.14	-0.8
1,054,591	+		ABZR87_RS05010	0.22	-1.3
1,054,639	+		ABZR87_RS05010	0.27	-1.6
1,054,639	+		ABZR87_RS05010	0.27	-3.0
1,054,640	-		ABZR87_RS05010	0.27	-0.7
1,054,640	-		ABZR87_RS05010	0.27	-2.6
1,054,640	-		ABZR87_RS05010	0.27	-1.5
1,054,805	+		ABZR87_RS05010	0.41	+0.2
1,054,955	-		ABZR87_RS05010	0.54	-1.0
1,054,963	+		ABZR87_RS05010	0.55	-1.0
1,054,964	-		ABZR87_RS05010	0.55	-0.6
1,055,059	+		ABZR87_RS05010	0.63	+1.2
1,055,059	+		ABZR87_RS05010	0.63	-2.3
1,055,060	-		ABZR87_RS05010	0.63	-1.3
1,055,065	+		ABZR87_RS05010	0.64	-0.8
1,055,065	+		ABZR87_RS05010	0.64	-0.1
1,055,098	+		ABZR87_RS05010	0.67	-1.1
1,055,098	+		ABZR87_RS05010	0.67	+0.6
1,055,099	-		ABZR87_RS05010	0.67	+0.0
1,055,239	+		ABZR87_RS05010	0.79	+0.2
1,055,240	-		ABZR87_RS05010	0.79	-2.5