Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS18255 and ABZR87_RS18260 are separated by 21 nucleotides ABZR87_RS18260 and ABZR87_RS18265 are separated by 301 nucleotides ABZR87_RS18265 and ABZR87_RS18270 are separated by 9 nucleotides
ABZR87_RS18255: ABZR87_RS18255 - LacI family DNA-binding transcriptional regulator, at 465,901 to 466,917
_RS18255
ABZR87_RS18260: ABZR87_RS18260 - IlvD/Edd family dehydratase, at 466,939 to 468,723
_RS18260
ABZR87_RS18265: ABZR87_RS18265 - hypothetical protein, at 469,025 to 469,555
_RS18265
ABZR87_RS18270: ABZR87_RS18270 - XRE family transcriptional regulator, at 469,565 to 470,167
_RS18270
Position (kb) 466
467
468
469 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 466.510 kb on + strand, within ABZR87_RS18255 at 466.511 kb on - strand, within ABZR87_RS18255 at 466.539 kb on - strand, within ABZR87_RS18255 at 466.929 kb on + strand at 466.930 kb on + strand at 466.930 kb on + strand at 466.930 kb on + strand at 466.986 kb on - strand at 467.430 kb on - strand, within ABZR87_RS18260 at 467.498 kb on + strand, within ABZR87_RS18260 at 467.499 kb on - strand, within ABZR87_RS18260 at 467.521 kb on + strand, within ABZR87_RS18260 at 467.521 kb on + strand, within ABZR87_RS18260 at 467.522 kb on - strand, within ABZR87_RS18260 at 467.680 kb on - strand, within ABZR87_RS18260 at 467.768 kb on + strand, within ABZR87_RS18260 at 468.008 kb on + strand, within ABZR87_RS18260 at 468.009 kb on - strand, within ABZR87_RS18260 at 468.009 kb on - strand, within ABZR87_RS18260 at 468.009 kb on - strand, within ABZR87_RS18260 at 468.405 kb on - strand, within ABZR87_RS18260 at 468.405 kb on - strand, within ABZR87_RS18260 at 468.499 kb on + strand, within ABZR87_RS18260 at 468.623 kb on + strand at 468.644 kb on + strand at 468.738 kb on + strand at 468.738 kb on + strand at 468.738 kb on + strand at 468.739 kb on - strand at 468.739 kb on - strand at 468.739 kb on - strand at 468.739 kb on - strand at 468.739 kb on - strand at 468.827 kb on + strand at 468.863 kb on - strand at 468.939 kb on + strand at 468.939 kb on + strand at 468.940 kb on - strand at 468.986 kb on + strand at 468.986 kb on + strand at 468.987 kb on - strand at 469.036 kb on - strand at 469.164 kb on + strand, within ABZR87_RS18265 at 469.164 kb on + strand, within ABZR87_RS18265 at 469.346 kb on + strand, within ABZR87_RS18265 at 469.346 kb on + strand, within ABZR87_RS18265 at 469.346 kb on + strand, within ABZR87_RS18265 at 469.346 kb on + strand, within ABZR87_RS18265 at 469.346 kb on + strand, within ABZR87_RS18265 at 469.347 kb on - strand, within ABZR87_RS18265 at 469.347 kb on - strand, within ABZR87_RS18265 at 469.347 kb on - strand, within ABZR87_RS18265 at 469.557 kb on + strand at 469.593 kb on + strand at 469.594 kb on - strand at 469.674 kb on + strand, within ABZR87_RS18270 at 469.674 kb on + strand, within ABZR87_RS18270 at 469.674 kb on + strand, within ABZR87_RS18270 at 469.675 kb on - strand, within ABZR87_RS18270 at 469.675 kb on - strand, within ABZR87_RS18270 at 469.675 kb on - strand, within ABZR87_RS18270 at 469.719 kb on - strand, within ABZR87_RS18270 at 469.719 kb on - strand, within ABZR87_RS18270
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 466,510 + ABZR87_RS18255 0.60 +0.4 466,511 - ABZR87_RS18255 0.60 -0.2 466,539 - ABZR87_RS18255 0.63 -0.3 466,929 + -0.3 466,930 + +0.2 466,930 + -0.1 466,930 + -0.4 466,986 - -2.5 467,430 - ABZR87_RS18260 0.28 -0.7 467,498 + ABZR87_RS18260 0.31 -1.0 467,499 - ABZR87_RS18260 0.31 -2.8 467,521 + ABZR87_RS18260 0.33 -2.6 467,521 + ABZR87_RS18260 0.33 -0.7 467,522 - ABZR87_RS18260 0.33 -2.5 467,680 - ABZR87_RS18260 0.42 -3.4 467,768 + ABZR87_RS18260 0.46 -1.8 468,008 + ABZR87_RS18260 0.60 -2.1 468,009 - ABZR87_RS18260 0.60 -3.1 468,009 - ABZR87_RS18260 0.60 -2.1 468,009 - ABZR87_RS18260 0.60 -2.8 468,405 - ABZR87_RS18260 0.82 -3.4 468,405 - ABZR87_RS18260 0.82 -2.6 468,499 + ABZR87_RS18260 0.87 -1.5 468,623 + -2.8 468,644 + -3.3 468,738 + -1.5 468,738 + -0.3 468,738 + -2.5 468,739 - -0.5 468,739 - -0.1 468,739 - +0.0 468,739 - +0.1 468,739 - +0.5 468,827 + -0.7 468,863 - +0.4 468,939 + -0.2 468,939 + -2.0 468,940 - -0.7 468,986 + +0.4 468,986 + -0.4 468,987 - -0.6 469,036 - +0.4 469,164 + ABZR87_RS18265 0.26 -0.1 469,164 + ABZR87_RS18265 0.26 -0.4 469,346 + ABZR87_RS18265 0.60 -0.1 469,346 + ABZR87_RS18265 0.60 -0.8 469,346 + ABZR87_RS18265 0.60 -0.1 469,346 + ABZR87_RS18265 0.60 +0.5 469,346 + ABZR87_RS18265 0.60 -0.2 469,347 - ABZR87_RS18265 0.61 -0.2 469,347 - ABZR87_RS18265 0.61 -0.3 469,347 - ABZR87_RS18265 0.61 +0.0 469,557 + +0.3 469,593 + -0.0 469,594 - -1.8 469,674 + ABZR87_RS18270 0.18 -0.5 469,674 + ABZR87_RS18270 0.18 -0.4 469,674 + ABZR87_RS18270 0.18 -0.4 469,675 - ABZR87_RS18270 0.18 -0.5 469,675 - ABZR87_RS18270 0.18 -0.5 469,675 - ABZR87_RS18270 0.18 -0.5 469,719 - ABZR87_RS18270 0.26 +0.2 469,719 - ABZR87_RS18270 0.26 -0.1
Or see this region's nucleotide sequence