Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS07640 and ABZR87_RS07645 are separated by 96 nucleotides ABZR87_RS07645 and ABZR87_RS07650 overlap by 4 nucleotides
ABZR87_RS07640: ABZR87_RS07640 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 1,618,147 to 1,619,721
_RS07640
ABZR87_RS07645: ABZR87_RS07645 - Fis family transcriptional regulator, at 1,619,818 to 1,620,051
_RS07645
ABZR87_RS07650: ABZR87_RS07650 - tRNA dihydrouridine synthase DusB, at 1,620,048 to 1,621,115
_RS07650
Position (kb)
1619
1620
1621 Strain fitness (log2 ratio)
-1
0
1 at 1619.964 kb on - strand, within ABZR87_RS07645 at 1620.000 kb on - strand, within ABZR87_RS07645 at 1620.000 kb on - strand, within ABZR87_RS07645 at 1620.003 kb on - strand, within ABZR87_RS07645 at 1620.003 kb on - strand, within ABZR87_RS07645 at 1620.003 kb on - strand, within ABZR87_RS07645 at 1620.125 kb on - strand at 1620.125 kb on - strand at 1620.293 kb on - strand, within ABZR87_RS07650 at 1620.301 kb on + strand, within ABZR87_RS07650 at 1620.302 kb on - strand, within ABZR87_RS07650 at 1620.302 kb on - strand, within ABZR87_RS07650 at 1620.302 kb on - strand, within ABZR87_RS07650 at 1620.310 kb on + strand, within ABZR87_RS07650 at 1620.581 kb on - strand, within ABZR87_RS07650 at 1620.581 kb on - strand, within ABZR87_RS07650 at 1620.581 kb on - strand, within ABZR87_RS07650 at 1620.655 kb on - strand, within ABZR87_RS07650 at 1620.655 kb on - strand, within ABZR87_RS07650 at 1620.862 kb on + strand, within ABZR87_RS07650 at 1620.863 kb on - strand, within ABZR87_RS07650 at 1620.863 kb on - strand, within ABZR87_RS07650 at 1620.863 kb on - strand, within ABZR87_RS07650
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 1,619,964 - ABZR87_RS07645 0.62 -0.1 1,620,000 - ABZR87_RS07645 0.78 -1.0 1,620,000 - ABZR87_RS07645 0.78 -0.9 1,620,003 - ABZR87_RS07645 0.79 -1.2 1,620,003 - ABZR87_RS07645 0.79 +0.1 1,620,003 - ABZR87_RS07645 0.79 -0.1 1,620,125 - -0.2 1,620,125 - +0.1 1,620,293 - ABZR87_RS07650 0.23 -0.1 1,620,301 + ABZR87_RS07650 0.24 +0.5 1,620,302 - ABZR87_RS07650 0.24 -1.3 1,620,302 - ABZR87_RS07650 0.24 -0.6 1,620,302 - ABZR87_RS07650 0.24 -0.6 1,620,310 + ABZR87_RS07650 0.25 -1.1 1,620,581 - ABZR87_RS07650 0.50 -0.3 1,620,581 - ABZR87_RS07650 0.50 -0.1 1,620,581 - ABZR87_RS07650 0.50 -0.6 1,620,655 - ABZR87_RS07650 0.57 -0.2 1,620,655 - ABZR87_RS07650 0.57 -0.4 1,620,862 + ABZR87_RS07650 0.76 -0.4 1,620,863 - ABZR87_RS07650 0.76 -0.9 1,620,863 - ABZR87_RS07650 0.76 +0.2 1,620,863 - ABZR87_RS07650 0.76 -0.5
Or see this region's nucleotide sequence