Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS19595 and ABZR87_RS19600 are separated by 152 nucleotides ABZR87_RS19600 and ABZR87_RS19605 are separated by 48 nucleotides
ABZR87_RS19595: ABZR87_RS19595 - Gfo/Idh/MocA family oxidoreductase, at 769,695 to 770,849
_RS19595
ABZR87_RS19600: ABZR87_RS19600 - antibiotic biosynthesis monooxygenase, at 771,002 to 771,346
_RS19600
ABZR87_RS19605: ABZR87_RS19605 - cytochrome P450, at 771,395 to 772,528
_RS19605
Position (kb) 771
772 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 770.090 kb on - strand, within ABZR87_RS19595 at 770.245 kb on + strand, within ABZR87_RS19595 at 770.245 kb on + strand, within ABZR87_RS19595 at 770.246 kb on - strand, within ABZR87_RS19595 at 770.246 kb on - strand, within ABZR87_RS19595 at 770.278 kb on + strand, within ABZR87_RS19595 at 770.279 kb on - strand, within ABZR87_RS19595 at 770.539 kb on + strand, within ABZR87_RS19595 at 770.540 kb on - strand, within ABZR87_RS19595 at 770.540 kb on - strand, within ABZR87_RS19595 at 770.540 kb on - strand, within ABZR87_RS19595 at 770.572 kb on + strand, within ABZR87_RS19595 at 770.611 kb on + strand, within ABZR87_RS19595 at 770.611 kb on + strand, within ABZR87_RS19595 at 770.611 kb on + strand, within ABZR87_RS19595 at 770.612 kb on - strand, within ABZR87_RS19595 at 770.612 kb on - strand, within ABZR87_RS19595 at 770.612 kb on - strand, within ABZR87_RS19595 at 770.620 kb on + strand, within ABZR87_RS19595 at 770.773 kb on + strand at 770.774 kb on - strand at 770.795 kb on + strand at 770.844 kb on - strand at 770.933 kb on - strand at 771.294 kb on + strand, within ABZR87_RS19600 at 771.294 kb on + strand, within ABZR87_RS19600 at 771.294 kb on + strand, within ABZR87_RS19600 at 771.295 kb on - strand, within ABZR87_RS19600 at 771.295 kb on - strand, within ABZR87_RS19600 at 771.295 kb on - strand, within ABZR87_RS19600 at 771.438 kb on + strand at 771.438 kb on + strand at 771.605 kb on + strand, within ABZR87_RS19605 at 771.605 kb on + strand, within ABZR87_RS19605 at 771.701 kb on - strand, within ABZR87_RS19605 at 771.867 kb on + strand, within ABZR87_RS19605 at 771.868 kb on - strand, within ABZR87_RS19605 at 772.023 kb on + strand, within ABZR87_RS19605 at 772.024 kb on - strand, within ABZR87_RS19605 at 772.024 kb on - strand, within ABZR87_RS19605 at 772.199 kb on + strand, within ABZR87_RS19605 at 772.199 kb on + strand, within ABZR87_RS19605 at 772.199 kb on + strand, within ABZR87_RS19605 at 772.199 kb on + strand, within ABZR87_RS19605 at 772.200 kb on - strand, within ABZR87_RS19605 at 772.200 kb on - strand, within ABZR87_RS19605 at 772.200 kb on - strand, within ABZR87_RS19605 at 772.200 kb on - strand, within ABZR87_RS19605 at 772.343 kb on + strand, within ABZR87_RS19605
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 770,090 - ABZR87_RS19595 0.34 -0.2 770,245 + ABZR87_RS19595 0.48 +0.1 770,245 + ABZR87_RS19595 0.48 +0.4 770,246 - ABZR87_RS19595 0.48 -0.3 770,246 - ABZR87_RS19595 0.48 +0.3 770,278 + ABZR87_RS19595 0.50 -0.0 770,279 - ABZR87_RS19595 0.51 +0.6 770,539 + ABZR87_RS19595 0.73 +0.3 770,540 - ABZR87_RS19595 0.73 +0.1 770,540 - ABZR87_RS19595 0.73 -0.1 770,540 - ABZR87_RS19595 0.73 -0.7 770,572 + ABZR87_RS19595 0.76 +0.3 770,611 + ABZR87_RS19595 0.79 +0.8 770,611 + ABZR87_RS19595 0.79 +0.5 770,611 + ABZR87_RS19595 0.79 -1.4 770,612 - ABZR87_RS19595 0.79 +0.6 770,612 - ABZR87_RS19595 0.79 -0.6 770,612 - ABZR87_RS19595 0.79 -0.6 770,620 + ABZR87_RS19595 0.80 -0.4 770,773 + +0.3 770,774 - -0.4 770,795 + -0.2 770,844 - -0.1 770,933 - +0.3 771,294 + ABZR87_RS19600 0.85 -1.4 771,294 + ABZR87_RS19600 0.85 -0.5 771,294 + ABZR87_RS19600 0.85 -0.2 771,295 - ABZR87_RS19600 0.85 -0.7 771,295 - ABZR87_RS19600 0.85 -0.8 771,295 - ABZR87_RS19600 0.85 +0.1 771,438 + +0.1 771,438 + +0.1 771,605 + ABZR87_RS19605 0.19 +0.5 771,605 + ABZR87_RS19605 0.19 +0.2 771,701 - ABZR87_RS19605 0.27 -0.8 771,867 + ABZR87_RS19605 0.42 +2.0 771,868 - ABZR87_RS19605 0.42 -0.1 772,023 + ABZR87_RS19605 0.55 +0.2 772,024 - ABZR87_RS19605 0.55 +0.4 772,024 - ABZR87_RS19605 0.55 -0.3 772,199 + ABZR87_RS19605 0.71 -0.8 772,199 + ABZR87_RS19605 0.71 +0.7 772,199 + ABZR87_RS19605 0.71 -0.5 772,199 + ABZR87_RS19605 0.71 +1.3 772,200 - ABZR87_RS19605 0.71 -0.1 772,200 - ABZR87_RS19605 0.71 -3.7 772,200 - ABZR87_RS19605 0.71 +0.3 772,200 - ABZR87_RS19605 0.71 +1.4 772,343 + ABZR87_RS19605 0.84 -0.4
Or see this region's nucleotide sequence