Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS17580 and ABZR87_RS17585 are separated by 259 nucleotides ABZR87_RS17585 and ABZR87_RS17590 are separated by 9 nucleotides
ABZR87_RS17580: ABZR87_RS17580 - amino acid permease, at 305,444 to 306,820
_RS17580
ABZR87_RS17585: ABZR87_RS17585 - alpha/beta hydrolase domain-containing protein, at 307,080 to 309,158
_RS17585
ABZR87_RS17590: ABZR87_RS17590 - sensor domain-containing diguanylate cyclase, at 309,168 to 310,685
_RS17590
Position (kb) 307
308
309
310 Strain fitness (log2 ratio) -2
-1
0
1
2 at 306.234 kb on + strand, within ABZR87_RS17580 at 306.234 kb on + strand, within ABZR87_RS17580 at 306.273 kb on + strand, within ABZR87_RS17580 at 306.274 kb on - strand, within ABZR87_RS17580 at 306.282 kb on + strand, within ABZR87_RS17580 at 306.339 kb on + strand, within ABZR87_RS17580 at 306.340 kb on - strand, within ABZR87_RS17580 at 306.450 kb on + strand, within ABZR87_RS17580 at 306.450 kb on + strand, within ABZR87_RS17580 at 306.450 kb on + strand, within ABZR87_RS17580 at 306.451 kb on - strand, within ABZR87_RS17580 at 306.451 kb on - strand, within ABZR87_RS17580 at 306.451 kb on - strand, within ABZR87_RS17580 at 306.451 kb on - strand, within ABZR87_RS17580 at 306.510 kb on + strand, within ABZR87_RS17580 at 306.543 kb on + strand, within ABZR87_RS17580 at 306.543 kb on + strand, within ABZR87_RS17580 at 306.543 kb on + strand, within ABZR87_RS17580 at 306.543 kb on + strand, within ABZR87_RS17580 at 306.544 kb on - strand, within ABZR87_RS17580 at 306.544 kb on - strand, within ABZR87_RS17580 at 306.556 kb on - strand, within ABZR87_RS17580 at 306.645 kb on + strand, within ABZR87_RS17580 at 306.645 kb on + strand, within ABZR87_RS17580 at 306.645 kb on + strand, within ABZR87_RS17580 at 306.646 kb on - strand, within ABZR87_RS17580 at 306.942 kb on + strand at 306.942 kb on + strand at 306.943 kb on - strand at 306.943 kb on - strand at 306.943 kb on - strand at 306.943 kb on - strand at 306.943 kb on - strand at 306.986 kb on + strand at 306.987 kb on - strand at 307.033 kb on - strand at 307.033 kb on - strand at 307.197 kb on + strand at 307.197 kb on + strand at 307.198 kb on - strand at 307.198 kb on - strand at 307.239 kb on + strand at 307.240 kb on - strand at 307.240 kb on - strand at 307.257 kb on + strand at 307.281 kb on - strand at 307.368 kb on + strand, within ABZR87_RS17585 at 307.368 kb on + strand, within ABZR87_RS17585 at 307.368 kb on + strand, within ABZR87_RS17585 at 307.368 kb on + strand, within ABZR87_RS17585 at 307.368 kb on + strand, within ABZR87_RS17585 at 307.369 kb on - strand, within ABZR87_RS17585 at 307.369 kb on - strand, within ABZR87_RS17585 at 307.431 kb on + strand, within ABZR87_RS17585 at 307.598 kb on + strand, within ABZR87_RS17585 at 307.598 kb on + strand, within ABZR87_RS17585 at 307.599 kb on - strand, within ABZR87_RS17585 at 307.599 kb on - strand, within ABZR87_RS17585 at 307.723 kb on - strand, within ABZR87_RS17585 at 307.872 kb on + strand, within ABZR87_RS17585 at 307.872 kb on + strand, within ABZR87_RS17585 at 307.872 kb on + strand, within ABZR87_RS17585 at 307.873 kb on - strand, within ABZR87_RS17585 at 307.873 kb on - strand, within ABZR87_RS17585 at 307.873 kb on - strand, within ABZR87_RS17585 at 307.873 kb on - strand, within ABZR87_RS17585 at 307.873 kb on - strand, within ABZR87_RS17585 at 307.878 kb on + strand, within ABZR87_RS17585 at 307.878 kb on + strand, within ABZR87_RS17585 at 307.879 kb on - strand, within ABZR87_RS17585 at 307.879 kb on - strand, within ABZR87_RS17585 at 307.879 kb on - strand, within ABZR87_RS17585 at 307.890 kb on + strand, within ABZR87_RS17585 at 307.891 kb on - strand, within ABZR87_RS17585 at 307.891 kb on - strand, within ABZR87_RS17585 at 307.913 kb on - strand, within ABZR87_RS17585 at 308.016 kb on + strand, within ABZR87_RS17585 at 308.247 kb on + strand, within ABZR87_RS17585 at 308.247 kb on + strand, within ABZR87_RS17585 at 308.248 kb on - strand, within ABZR87_RS17585 at 308.248 kb on - strand, within ABZR87_RS17585 at 308.248 kb on - strand, within ABZR87_RS17585 at 308.427 kb on + strand, within ABZR87_RS17585 at 308.427 kb on + strand, within ABZR87_RS17585 at 308.428 kb on - strand, within ABZR87_RS17585 at 308.428 kb on - strand, within ABZR87_RS17585 at 308.428 kb on - strand, within ABZR87_RS17585 at 308.428 kb on - strand, within ABZR87_RS17585 at 308.430 kb on + strand, within ABZR87_RS17585 at 308.430 kb on + strand, within ABZR87_RS17585 at 308.430 kb on + strand, within ABZR87_RS17585 at 308.430 kb on + strand, within ABZR87_RS17585 at 308.430 kb on + strand, within ABZR87_RS17585 at 308.430 kb on + strand, within ABZR87_RS17585 at 308.431 kb on - strand, within ABZR87_RS17585 at 308.431 kb on - strand, within ABZR87_RS17585 at 308.434 kb on - strand, within ABZR87_RS17585 at 308.508 kb on + strand, within ABZR87_RS17585 at 308.508 kb on + strand, within ABZR87_RS17585 at 308.508 kb on + strand, within ABZR87_RS17585 at 308.521 kb on - strand, within ABZR87_RS17585 at 308.521 kb on - strand, within ABZR87_RS17585 at 308.566 kb on + strand, within ABZR87_RS17585 at 308.567 kb on - strand, within ABZR87_RS17585 at 308.567 kb on - strand, within ABZR87_RS17585 at 308.567 kb on - strand, within ABZR87_RS17585 at 308.567 kb on - strand, within ABZR87_RS17585 at 308.567 kb on - strand, within ABZR87_RS17585 at 308.567 kb on - strand, within ABZR87_RS17585 at 308.567 kb on - strand, within ABZR87_RS17585 at 308.568 kb on + strand, within ABZR87_RS17585 at 308.568 kb on + strand, within ABZR87_RS17585 at 308.568 kb on + strand, within ABZR87_RS17585 at 308.569 kb on - strand, within ABZR87_RS17585 at 308.569 kb on - strand, within ABZR87_RS17585 at 308.569 kb on - strand, within ABZR87_RS17585 at 308.569 kb on - strand, within ABZR87_RS17585 at 308.569 kb on - strand, within ABZR87_RS17585 at 308.694 kb on + strand, within ABZR87_RS17585 at 308.694 kb on + strand, within ABZR87_RS17585 at 308.694 kb on + strand, within ABZR87_RS17585 at 308.694 kb on + strand, within ABZR87_RS17585 at 308.694 kb on + strand, within ABZR87_RS17585 at 308.694 kb on + strand, within ABZR87_RS17585 at 308.694 kb on + strand, within ABZR87_RS17585 at 308.695 kb on - strand, within ABZR87_RS17585 at 308.715 kb on + strand, within ABZR87_RS17585 at 308.716 kb on - strand, within ABZR87_RS17585 at 308.742 kb on + strand, within ABZR87_RS17585 at 308.742 kb on + strand, within ABZR87_RS17585 at 308.742 kb on + strand, within ABZR87_RS17585 at 308.743 kb on - strand, within ABZR87_RS17585 at 308.790 kb on + strand, within ABZR87_RS17585 at 308.791 kb on - strand, within ABZR87_RS17585 at 308.791 kb on - strand, within ABZR87_RS17585 at 308.791 kb on - strand, within ABZR87_RS17585 at 308.805 kb on + strand, within ABZR87_RS17585 at 308.805 kb on + strand, within ABZR87_RS17585 at 309.027 kb on + strand at 309.045 kb on + strand at 309.046 kb on - strand at 309.046 kb on - strand at 309.046 kb on - strand at 309.156 kb on + strand at 309.156 kb on + strand at 309.238 kb on + strand at 309.238 kb on + strand at 309.238 kb on + strand at 309.238 kb on + strand at 309.238 kb on + strand at 309.238 kb on + strand at 309.238 kb on + strand at 309.239 kb on - strand at 309.239 kb on - strand at 309.239 kb on - strand at 309.239 kb on - strand at 309.340 kb on + strand, within ABZR87_RS17590 at 309.461 kb on - strand, within ABZR87_RS17590 at 309.551 kb on - strand, within ABZR87_RS17590 at 309.563 kb on - strand, within ABZR87_RS17590 at 309.563 kb on - strand, within ABZR87_RS17590 at 309.563 kb on - strand, within ABZR87_RS17590 at 309.692 kb on + strand, within ABZR87_RS17590 at 309.835 kb on + strand, within ABZR87_RS17590 at 309.835 kb on + strand, within ABZR87_RS17590 at 309.835 kb on + strand, within ABZR87_RS17590 at 309.835 kb on + strand, within ABZR87_RS17590 at 309.836 kb on - strand, within ABZR87_RS17590 at 309.836 kb on - strand, within ABZR87_RS17590 at 309.836 kb on - strand, within ABZR87_RS17590 at 309.888 kb on - strand, within ABZR87_RS17590 at 309.915 kb on - strand, within ABZR87_RS17590 at 309.940 kb on + strand, within ABZR87_RS17590 at 309.940 kb on + strand, within ABZR87_RS17590 at 309.940 kb on + strand, within ABZR87_RS17590 at 309.941 kb on - strand, within ABZR87_RS17590 at 309.941 kb on - strand, within ABZR87_RS17590 at 309.941 kb on - strand, within ABZR87_RS17590 at 309.941 kb on - strand, within ABZR87_RS17590 at 309.941 kb on - strand, within ABZR87_RS17590 at 310.019 kb on - strand, within ABZR87_RS17590
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 306,234 + ABZR87_RS17580 0.57 +0.5 306,234 + ABZR87_RS17580 0.57 +0.2 306,273 + ABZR87_RS17580 0.60 +0.1 306,274 - ABZR87_RS17580 0.60 +0.1 306,282 + ABZR87_RS17580 0.61 +1.2 306,339 + ABZR87_RS17580 0.65 +0.7 306,340 - ABZR87_RS17580 0.65 +0.3 306,450 + ABZR87_RS17580 0.73 +0.2 306,450 + ABZR87_RS17580 0.73 -0.3 306,450 + ABZR87_RS17580 0.73 +0.1 306,451 - ABZR87_RS17580 0.73 -0.9 306,451 - ABZR87_RS17580 0.73 +0.6 306,451 - ABZR87_RS17580 0.73 -0.1 306,451 - ABZR87_RS17580 0.73 -0.3 306,510 + ABZR87_RS17580 0.77 -0.9 306,543 + ABZR87_RS17580 0.80 -0.2 306,543 + ABZR87_RS17580 0.80 +0.5 306,543 + ABZR87_RS17580 0.80 +0.3 306,543 + ABZR87_RS17580 0.80 +0.1 306,544 - ABZR87_RS17580 0.80 -0.8 306,544 - ABZR87_RS17580 0.80 +0.2 306,556 - ABZR87_RS17580 0.81 -0.3 306,645 + ABZR87_RS17580 0.87 -0.4 306,645 + ABZR87_RS17580 0.87 +0.4 306,645 + ABZR87_RS17580 0.87 +0.2 306,646 - ABZR87_RS17580 0.87 +0.1 306,942 + -0.1 306,942 + +0.1 306,943 - +0.2 306,943 - +0.3 306,943 - +0.0 306,943 - -0.7 306,943 - +1.0 306,986 + +0.7 306,987 - -0.5 307,033 - +0.5 307,033 - +0.3 307,197 + -0.2 307,197 + +0.8 307,198 - -0.1 307,198 - +0.4 307,239 + +0.0 307,240 - +0.2 307,240 - -0.3 307,257 + +0.1 307,281 - +0.3 307,368 + ABZR87_RS17585 0.14 -0.1 307,368 + ABZR87_RS17585 0.14 -0.8 307,368 + ABZR87_RS17585 0.14 +0.1 307,368 + ABZR87_RS17585 0.14 -0.9 307,368 + ABZR87_RS17585 0.14 -0.4 307,369 - ABZR87_RS17585 0.14 +0.0 307,369 - ABZR87_RS17585 0.14 -0.9 307,431 + ABZR87_RS17585 0.17 -1.0 307,598 + ABZR87_RS17585 0.25 -0.8 307,598 + ABZR87_RS17585 0.25 -0.9 307,599 - ABZR87_RS17585 0.25 -0.1 307,599 - ABZR87_RS17585 0.25 +0.5 307,723 - ABZR87_RS17585 0.31 +2.3 307,872 + ABZR87_RS17585 0.38 -0.5 307,872 + ABZR87_RS17585 0.38 +0.5 307,872 + ABZR87_RS17585 0.38 -0.0 307,873 - ABZR87_RS17585 0.38 -0.4 307,873 - ABZR87_RS17585 0.38 +1.7 307,873 - ABZR87_RS17585 0.38 +0.9 307,873 - ABZR87_RS17585 0.38 +0.0 307,873 - ABZR87_RS17585 0.38 +0.2 307,878 + ABZR87_RS17585 0.38 +0.3 307,878 + ABZR87_RS17585 0.38 -0.5 307,879 - ABZR87_RS17585 0.38 +2.1 307,879 - ABZR87_RS17585 0.38 -0.5 307,879 - ABZR87_RS17585 0.38 +0.1 307,890 + ABZR87_RS17585 0.39 +0.1 307,891 - ABZR87_RS17585 0.39 +1.0 307,891 - ABZR87_RS17585 0.39 +0.4 307,913 - ABZR87_RS17585 0.40 +0.7 308,016 + ABZR87_RS17585 0.45 +0.5 308,247 + ABZR87_RS17585 0.56 -0.2 308,247 + ABZR87_RS17585 0.56 -1.0 308,248 - ABZR87_RS17585 0.56 +1.3 308,248 - ABZR87_RS17585 0.56 +1.1 308,248 - ABZR87_RS17585 0.56 +0.1 308,427 + ABZR87_RS17585 0.65 -1.1 308,427 + ABZR87_RS17585 0.65 -1.0 308,428 - ABZR87_RS17585 0.65 -0.3 308,428 - ABZR87_RS17585 0.65 -0.7 308,428 - ABZR87_RS17585 0.65 +0.4 308,428 - ABZR87_RS17585 0.65 +0.3 308,430 + ABZR87_RS17585 0.65 +1.1 308,430 + ABZR87_RS17585 0.65 +0.1 308,430 + ABZR87_RS17585 0.65 -0.0 308,430 + ABZR87_RS17585 0.65 -0.9 308,430 + ABZR87_RS17585 0.65 +0.6 308,430 + ABZR87_RS17585 0.65 -0.1 308,431 - ABZR87_RS17585 0.65 +0.2 308,431 - ABZR87_RS17585 0.65 +0.1 308,434 - ABZR87_RS17585 0.65 -0.7 308,508 + ABZR87_RS17585 0.69 +1.3 308,508 + ABZR87_RS17585 0.69 -1.0 308,508 + ABZR87_RS17585 0.69 +0.2 308,521 - ABZR87_RS17585 0.69 +0.9 308,521 - ABZR87_RS17585 0.69 +0.4 308,566 + ABZR87_RS17585 0.71 -0.1 308,567 - ABZR87_RS17585 0.72 -1.2 308,567 - ABZR87_RS17585 0.72 +0.2 308,567 - ABZR87_RS17585 0.72 -0.4 308,567 - ABZR87_RS17585 0.72 -0.6 308,567 - ABZR87_RS17585 0.72 +1.1 308,567 - ABZR87_RS17585 0.72 -0.1 308,567 - ABZR87_RS17585 0.72 -0.3 308,568 + ABZR87_RS17585 0.72 -0.4 308,568 + ABZR87_RS17585 0.72 +0.5 308,568 + ABZR87_RS17585 0.72 +0.2 308,569 - ABZR87_RS17585 0.72 +0.7 308,569 - ABZR87_RS17585 0.72 -0.5 308,569 - ABZR87_RS17585 0.72 +0.1 308,569 - ABZR87_RS17585 0.72 +2.1 308,569 - ABZR87_RS17585 0.72 -0.8 308,694 + ABZR87_RS17585 0.78 -0.2 308,694 + ABZR87_RS17585 0.78 -0.8 308,694 + ABZR87_RS17585 0.78 -0.1 308,694 + ABZR87_RS17585 0.78 -1.1 308,694 + ABZR87_RS17585 0.78 -0.0 308,694 + ABZR87_RS17585 0.78 -0.2 308,694 + ABZR87_RS17585 0.78 +0.2 308,695 - ABZR87_RS17585 0.78 -0.5 308,715 + ABZR87_RS17585 0.79 -1.8 308,716 - ABZR87_RS17585 0.79 -0.0 308,742 + ABZR87_RS17585 0.80 +0.2 308,742 + ABZR87_RS17585 0.80 -0.2 308,742 + ABZR87_RS17585 0.80 +0.9 308,743 - ABZR87_RS17585 0.80 +0.2 308,790 + ABZR87_RS17585 0.82 -1.2 308,791 - ABZR87_RS17585 0.82 +0.1 308,791 - ABZR87_RS17585 0.82 +0.4 308,791 - ABZR87_RS17585 0.82 +0.0 308,805 + ABZR87_RS17585 0.83 +0.1 308,805 + ABZR87_RS17585 0.83 -0.1 309,027 + -0.2 309,045 + -0.1 309,046 - +0.1 309,046 - -2.0 309,046 - -0.2 309,156 + +1.7 309,156 + -0.1 309,238 + +0.4 309,238 + -0.9 309,238 + +0.9 309,238 + -0.2 309,238 + +0.0 309,238 + +0.1 309,238 + +0.8 309,239 - +1.0 309,239 - -0.0 309,239 - +0.4 309,239 - +0.2 309,340 + ABZR87_RS17590 0.11 +0.6 309,461 - ABZR87_RS17590 0.19 -1.1 309,551 - ABZR87_RS17590 0.25 +1.6 309,563 - ABZR87_RS17590 0.26 +0.7 309,563 - ABZR87_RS17590 0.26 +0.2 309,563 - ABZR87_RS17590 0.26 -0.2 309,692 + ABZR87_RS17590 0.35 +0.1 309,835 + ABZR87_RS17590 0.44 -0.8 309,835 + ABZR87_RS17590 0.44 +0.2 309,835 + ABZR87_RS17590 0.44 +0.2 309,835 + ABZR87_RS17590 0.44 +1.1 309,836 - ABZR87_RS17590 0.44 +0.3 309,836 - ABZR87_RS17590 0.44 +0.3 309,836 - ABZR87_RS17590 0.44 -0.2 309,888 - ABZR87_RS17590 0.47 -0.5 309,915 - ABZR87_RS17590 0.49 -0.3 309,940 + ABZR87_RS17590 0.51 -0.5 309,940 + ABZR87_RS17590 0.51 -0.4 309,940 + ABZR87_RS17590 0.51 -0.3 309,941 - ABZR87_RS17590 0.51 -0.1 309,941 - ABZR87_RS17590 0.51 -0.6 309,941 - ABZR87_RS17590 0.51 -0.1 309,941 - ABZR87_RS17590 0.51 +0.1 309,941 - ABZR87_RS17590 0.51 -0.0 310,019 - ABZR87_RS17590 0.56 +0.1
Or see this region's nucleotide sequence