Experiment: Adenosine 3' 5' cyclic monophosphate 1 mM phosphorus source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HMPREF1058_RS11955 and HMPREF1058_RS11950 are separated by 27 nucleotides HMPREF1058_RS11950 and HMPREF1058_RS11945 overlap by 1 nucleotides
HMPREF1058_RS11955: HMPREF1058_RS11955 - calcium-translocating P-type ATPase, PMCA-type, at 236,868 to 239,498
_RS11955
HMPREF1058_RS11950: HMPREF1058_RS11950 - HAD family phosphatase, at 239,526 to 240,140
_RS11950
HMPREF1058_RS11945: HMPREF1058_RS11945 - bifunctional riboflavin kinase/FAD synthetase, at 240,140 to 241,060
_RS11945
Position (kb) 239
240
241 Strain fitness (log2 ratio) -2
-1
0
1 at 239.509 kb on - strand at 239.517 kb on + strand at 239.517 kb on + strand at 239.518 kb on - strand at 239.535 kb on - strand at 239.631 kb on - strand, within HMPREF1058_RS11950 at 239.768 kb on + strand, within HMPREF1058_RS11950 at 239.785 kb on + strand, within HMPREF1058_RS11950 at 239.815 kb on + strand, within HMPREF1058_RS11950 at 239.815 kb on + strand, within HMPREF1058_RS11950 at 239.816 kb on - strand, within HMPREF1058_RS11950 at 239.816 kb on - strand, within HMPREF1058_RS11950 at 239.838 kb on + strand, within HMPREF1058_RS11950 at 239.838 kb on + strand, within HMPREF1058_RS11950 at 239.839 kb on - strand, within HMPREF1058_RS11950 at 239.839 kb on - strand, within HMPREF1058_RS11950 at 239.840 kb on + strand, within HMPREF1058_RS11950 at 239.841 kb on - strand, within HMPREF1058_RS11950 at 239.858 kb on + strand, within HMPREF1058_RS11950 at 239.858 kb on + strand, within HMPREF1058_RS11950 at 239.858 kb on + strand, within HMPREF1058_RS11950 at 240.096 kb on + strand at 241.058 kb on + strand at 241.108 kb on - strand at 241.121 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine 3' 5' cyclic monophosphate 1 mM phosphorus source remove 239,509 - -1.2 239,517 + -1.8 239,517 + -0.8 239,518 - +0.4 239,535 - -1.7 239,631 - HMPREF1058_RS11950 0.17 -2.6 239,768 + HMPREF1058_RS11950 0.39 +0.0 239,785 + HMPREF1058_RS11950 0.42 -1.7 239,815 + HMPREF1058_RS11950 0.47 -0.5 239,815 + HMPREF1058_RS11950 0.47 -1.5 239,816 - HMPREF1058_RS11950 0.47 -0.7 239,816 - HMPREF1058_RS11950 0.47 -1.0 239,838 + HMPREF1058_RS11950 0.51 -0.2 239,838 + HMPREF1058_RS11950 0.51 -1.3 239,839 - HMPREF1058_RS11950 0.51 -1.0 239,839 - HMPREF1058_RS11950 0.51 -1.5 239,840 + HMPREF1058_RS11950 0.51 +0.3 239,841 - HMPREF1058_RS11950 0.51 -1.3 239,858 + HMPREF1058_RS11950 0.54 -1.7 239,858 + HMPREF1058_RS11950 0.54 +1.2 239,858 + HMPREF1058_RS11950 0.54 -1.7 240,096 + -0.1 241,058 + -0.2 241,108 - -0.5 241,121 + -0.3
Or see this region's nucleotide sequence