Experiment: Galactose 1-phosphate dipotassium salt 1 mM phosphorus source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HMPREF1058_RS06575 and HMPREF1058_RS06570 are separated by 97 nucleotides HMPREF1058_RS06570 and HMPREF1058_RS06565 are separated by 203 nucleotides
HMPREF1058_RS06575: HMPREF1058_RS06575 - phosphate ABC transporter permease PstA, at 445,993 to 446,880
_RS06575
HMPREF1058_RS06570: HMPREF1058_RS06570 - phosphate ABC transporter ATP-binding protein, at 446,978 to 447,730
_RS06570
HMPREF1058_RS06565: HMPREF1058_RS06565 - phosphate signaling complex protein PhoU, at 447,934 to 448,635
_RS06565
Position (kb) 446
447
448 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3 at 445.983 kb on + strand at 445.987 kb on + strand at 445.988 kb on - strand at 446.081 kb on - strand at 446.085 kb on + strand, within HMPREF1058_RS06575 at 446.086 kb on - strand at 446.086 kb on - strand, within HMPREF1058_RS06575 at 446.086 kb on - strand, within HMPREF1058_RS06575 at 446.123 kb on + strand, within HMPREF1058_RS06575 at 446.125 kb on + strand, within HMPREF1058_RS06575 at 446.126 kb on - strand, within HMPREF1058_RS06575 at 446.128 kb on - strand, within HMPREF1058_RS06575 at 446.128 kb on - strand, within HMPREF1058_RS06575 at 446.197 kb on - strand, within HMPREF1058_RS06575 at 446.213 kb on + strand, within HMPREF1058_RS06575 at 446.225 kb on - strand, within HMPREF1058_RS06575 at 446.402 kb on - strand, within HMPREF1058_RS06575 at 446.459 kb on + strand, within HMPREF1058_RS06575 at 446.731 kb on + strand, within HMPREF1058_RS06575 at 446.782 kb on + strand, within HMPREF1058_RS06575 at 446.821 kb on - strand at 446.931 kb on + strand at 446.931 kb on + strand at 446.932 kb on - strand at 446.932 kb on - strand at 446.988 kb on + strand at 446.989 kb on - strand at 446.989 kb on - strand at 447.042 kb on + strand at 447.042 kb on + strand at 447.043 kb on - strand at 447.043 kb on - strand at 447.043 kb on - strand at 447.043 kb on - strand at 447.081 kb on + strand, within HMPREF1058_RS06570 at 447.191 kb on - strand, within HMPREF1058_RS06570 at 447.191 kb on - strand, within HMPREF1058_RS06570 at 447.466 kb on - strand, within HMPREF1058_RS06570 at 447.514 kb on + strand, within HMPREF1058_RS06570 at 447.532 kb on - strand, within HMPREF1058_RS06570 at 447.563 kb on + strand, within HMPREF1058_RS06570 at 447.564 kb on - strand, within HMPREF1058_RS06570 at 447.632 kb on + strand, within HMPREF1058_RS06570 at 447.633 kb on - strand, within HMPREF1058_RS06570 at 447.633 kb on - strand, within HMPREF1058_RS06570 at 447.634 kb on + strand, within HMPREF1058_RS06570 at 447.643 kb on + strand, within HMPREF1058_RS06570 at 447.654 kb on - strand, within HMPREF1058_RS06570 at 447.677 kb on - strand at 447.707 kb on + strand at 447.708 kb on - strand at 447.708 kb on - strand at 447.764 kb on - strand at 447.823 kb on + strand at 447.911 kb on + strand at 447.962 kb on + strand at 447.962 kb on + strand at 448.142 kb on - strand, within HMPREF1058_RS06565 at 448.190 kb on + strand, within HMPREF1058_RS06565 at 448.296 kb on + strand, within HMPREF1058_RS06565 at 448.299 kb on - strand, within HMPREF1058_RS06565 at 448.532 kb on + strand, within HMPREF1058_RS06565 at 448.533 kb on - strand, within HMPREF1058_RS06565 at 448.598 kb on + strand at 448.654 kb on - strand at 448.673 kb on - strand at 448.674 kb on + strand at 448.676 kb on + strand at 448.676 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Galactose 1-phosphate dipotassium salt 1 mM phosphorus source remove 445,983 + -0.5 445,987 + +0.7 445,988 - +1.3 446,081 - +0.4 446,085 + HMPREF1058_RS06575 0.10 -1.0 446,086 - +0.9 446,086 - HMPREF1058_RS06575 0.10 +1.0 446,086 - HMPREF1058_RS06575 0.10 +0.4 446,123 + HMPREF1058_RS06575 0.15 +0.1 446,125 + HMPREF1058_RS06575 0.15 +1.6 446,126 - HMPREF1058_RS06575 0.15 +3.0 446,128 - HMPREF1058_RS06575 0.15 +2.8 446,128 - HMPREF1058_RS06575 0.15 +3.5 446,197 - HMPREF1058_RS06575 0.23 +1.1 446,213 + HMPREF1058_RS06575 0.25 +0.9 446,225 - HMPREF1058_RS06575 0.26 +1.3 446,402 - HMPREF1058_RS06575 0.46 +1.0 446,459 + HMPREF1058_RS06575 0.52 -0.9 446,731 + HMPREF1058_RS06575 0.83 +0.5 446,782 + HMPREF1058_RS06575 0.89 -0.1 446,821 - +1.6 446,931 + -1.6 446,931 + -0.1 446,932 - +0.5 446,932 - +0.3 446,988 + +0.3 446,989 - -0.9 446,989 - +2.6 447,042 + +2.2 447,042 + +0.3 447,043 - +0.5 447,043 - +1.3 447,043 - -0.5 447,043 - +2.0 447,081 + HMPREF1058_RS06570 0.14 +1.7 447,191 - HMPREF1058_RS06570 0.28 -0.1 447,191 - HMPREF1058_RS06570 0.28 +0.8 447,466 - HMPREF1058_RS06570 0.65 +1.8 447,514 + HMPREF1058_RS06570 0.71 -1.0 447,532 - HMPREF1058_RS06570 0.74 +1.2 447,563 + HMPREF1058_RS06570 0.78 +0.7 447,564 - HMPREF1058_RS06570 0.78 +1.3 447,632 + HMPREF1058_RS06570 0.87 +2.2 447,633 - HMPREF1058_RS06570 0.87 +0.6 447,633 - HMPREF1058_RS06570 0.87 +0.4 447,634 + HMPREF1058_RS06570 0.87 +0.4 447,643 + HMPREF1058_RS06570 0.88 +0.5 447,654 - HMPREF1058_RS06570 0.90 +2.5 447,677 - -1.1 447,707 + -1.2 447,708 - -0.1 447,708 - +1.5 447,764 - -3.7 447,823 + +1.1 447,911 + -0.3 447,962 + -1.5 447,962 + -1.4 448,142 - HMPREF1058_RS06565 0.30 -0.1 448,190 + HMPREF1058_RS06565 0.36 -3.7 448,296 + HMPREF1058_RS06565 0.52 -4.3 448,299 - HMPREF1058_RS06565 0.52 -4.0 448,532 + HMPREF1058_RS06565 0.85 -5.9 448,533 - HMPREF1058_RS06565 0.85 -2.7 448,598 + +0.0 448,654 - -1.1 448,673 - -2.2 448,674 + -1.1 448,676 + -0.4 448,676 + -0.0
Or see this region's nucleotide sequence