Experiment: L-Citrulline
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00070 and AO353_00075 are separated by 521 nucleotides AO353_00075 and AO353_00080 are separated by 166 nucleotides AO353_00080 and AO353_00085 are separated by 9 nucleotides
AO353_00070: AO353_00070 - AraC family transcriptional regulator, at 14,653 to 15,441
_00070
AO353_00075: AO353_00075 - hypothetical protein, at 15,963 to 16,775
_00075
AO353_00080: AO353_00080 - hypothetical protein, at 16,942 to 17,520
_00080
AO353_00085: AO353_00085 - phospholipase, at 17,530 to 18,240
_00085
Position (kb) 15
16
17 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 15.062 kb on + strand, within AO353_00070 at 15.062 kb on + strand, within AO353_00070 at 15.062 kb on + strand, within AO353_00070 at 15.062 kb on + strand, within AO353_00070 at 15.062 kb on + strand, within AO353_00070 at 15.062 kb on + strand, within AO353_00070 at 15.063 kb on - strand, within AO353_00070 at 15.063 kb on - strand, within AO353_00070 at 15.063 kb on - strand, within AO353_00070 at 15.063 kb on - strand, within AO353_00070 at 15.063 kb on - strand, within AO353_00070 at 15.065 kb on + strand, within AO353_00070 at 15.065 kb on + strand, within AO353_00070 at 15.065 kb on + strand, within AO353_00070 at 15.065 kb on + strand, within AO353_00070 at 15.066 kb on - strand, within AO353_00070 at 15.066 kb on - strand, within AO353_00070 at 15.154 kb on - strand, within AO353_00070 at 15.185 kb on + strand, within AO353_00070 at 15.185 kb on + strand, within AO353_00070 at 15.185 kb on + strand, within AO353_00070 at 15.185 kb on + strand, within AO353_00070 at 15.185 kb on + strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.189 kb on + strand, within AO353_00070 at 15.189 kb on + strand, within AO353_00070 at 15.189 kb on + strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.321 kb on - strand, within AO353_00070 at 15.321 kb on - strand, within AO353_00070 at 15.321 kb on - strand, within AO353_00070 at 15.359 kb on + strand, within AO353_00070 at 15.359 kb on + strand, within AO353_00070 at 15.359 kb on + strand, within AO353_00070 at 15.531 kb on + strand at 15.531 kb on + strand at 15.531 kb on + strand at 15.531 kb on + strand at 15.531 kb on + strand at 15.531 kb on + strand at 15.531 kb on + strand at 15.532 kb on - strand at 15.532 kb on - strand at 15.532 kb on - strand at 15.646 kb on + strand at 15.646 kb on + strand at 15.646 kb on + strand at 15.646 kb on + strand at 15.647 kb on - strand at 15.647 kb on - strand at 15.653 kb on + strand at 15.668 kb on + strand at 15.686 kb on + strand at 15.687 kb on - strand at 15.727 kb on + strand at 15.728 kb on - strand at 15.728 kb on - strand at 15.728 kb on - strand at 15.728 kb on - strand at 15.728 kb on - strand at 15.728 kb on - strand at 15.728 kb on - strand at 15.842 kb on + strand at 15.843 kb on - strand at 15.843 kb on - strand at 15.843 kb on - strand at 15.843 kb on - strand at 15.985 kb on + strand at 16.004 kb on - strand at 16.185 kb on + strand, within AO353_00075 at 16.185 kb on + strand, within AO353_00075 at 16.261 kb on + strand, within AO353_00075 at 16.335 kb on + strand, within AO353_00075 at 16.336 kb on - strand, within AO353_00075 at 16.336 kb on - strand, within AO353_00075 at 16.336 kb on - strand, within AO353_00075 at 16.336 kb on - strand, within AO353_00075 at 16.336 kb on - strand, within AO353_00075 at 16.336 kb on - strand, within AO353_00075 at 16.336 kb on - strand, within AO353_00075 at 16.336 kb on - strand, within AO353_00075 at 16.336 kb on - strand, within AO353_00075 at 16.336 kb on - strand, within AO353_00075 at 16.336 kb on - strand, within AO353_00075 at 16.584 kb on + strand, within AO353_00075 at 16.584 kb on + strand, within AO353_00075 at 16.584 kb on + strand, within AO353_00075 at 16.584 kb on + strand, within AO353_00075 at 16.584 kb on + strand, within AO353_00075 at 16.584 kb on + strand, within AO353_00075 at 16.584 kb on + strand, within AO353_00075 at 16.585 kb on - strand, within AO353_00075 at 16.585 kb on - strand, within AO353_00075 at 16.585 kb on - strand, within AO353_00075 at 16.585 kb on - strand, within AO353_00075 at 16.805 kb on + strand at 16.806 kb on - strand at 16.806 kb on - strand at 16.954 kb on - strand at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.167 kb on + strand, within AO353_00080 at 17.168 kb on - strand, within AO353_00080 at 17.168 kb on - strand, within AO353_00080 at 17.168 kb on - strand, within AO353_00080 at 17.168 kb on - strand, within AO353_00080 at 17.168 kb on - strand, within AO353_00080 at 17.168 kb on - strand, within AO353_00080 at 17.168 kb on - strand, within AO353_00080 at 17.168 kb on - strand, within AO353_00080 at 17.168 kb on - strand, within AO353_00080 at 17.168 kb on - strand, within AO353_00080 at 17.168 kb on - strand, within AO353_00080 at 17.514 kb on + strand at 17.514 kb on + strand at 17.514 kb on + strand at 17.514 kb on + strand at 17.515 kb on - strand at 17.515 kb on - strand at 17.515 kb on - strand at 17.515 kb on - strand at 17.515 kb on - strand at 17.518 kb on + strand at 17.518 kb on + strand at 17.518 kb on + strand at 17.518 kb on + strand at 17.519 kb on - strand at 17.519 kb on - strand at 17.519 kb on - strand at 17.519 kb on - strand at 17.519 kb on - strand at 17.519 kb on - strand at 17.532 kb on - strand at 17.589 kb on + strand at 17.589 kb on + strand at 17.590 kb on - strand at 17.607 kb on - strand, within AO353_00085 at 17.673 kb on - strand, within AO353_00085 at 17.755 kb on + strand, within AO353_00085
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline remove 15,062 + AO353_00070 0.52 -1.1 15,062 + AO353_00070 0.52 -0.2 15,062 + AO353_00070 0.52 +3.3 15,062 + AO353_00070 0.52 +1.2 15,062 + AO353_00070 0.52 -0.1 15,062 + AO353_00070 0.52 +0.4 15,063 - AO353_00070 0.52 +0.1 15,063 - AO353_00070 0.52 -0.2 15,063 - AO353_00070 0.52 +1.3 15,063 - AO353_00070 0.52 -0.9 15,063 - AO353_00070 0.52 -1.5 15,065 + AO353_00070 0.52 -0.1 15,065 + AO353_00070 0.52 +0.3 15,065 + AO353_00070 0.52 +0.1 15,065 + AO353_00070 0.52 -0.1 15,066 - AO353_00070 0.52 -2.1 15,066 - AO353_00070 0.52 -0.6 15,154 - AO353_00070 0.63 +0.2 15,185 + AO353_00070 0.67 +1.9 15,185 + AO353_00070 0.67 -0.5 15,185 + AO353_00070 0.67 -0.5 15,185 + AO353_00070 0.67 -2.3 15,185 + AO353_00070 0.67 +0.9 15,186 - AO353_00070 0.68 -0.3 15,186 - AO353_00070 0.68 +0.9 15,186 - AO353_00070 0.68 -0.6 15,186 - AO353_00070 0.68 -2.2 15,186 - AO353_00070 0.68 -2.1 15,186 - AO353_00070 0.68 -2.6 15,186 - AO353_00070 0.68 -0.3 15,186 - AO353_00070 0.68 +1.4 15,186 - AO353_00070 0.68 +0.9 15,189 + AO353_00070 0.68 +1.9 15,189 + AO353_00070 0.68 +0.1 15,189 + AO353_00070 0.68 -1.1 15,190 - AO353_00070 0.68 -1.9 15,190 - AO353_00070 0.68 +2.1 15,190 - AO353_00070 0.68 +0.9 15,190 - AO353_00070 0.68 -2.2 15,190 - AO353_00070 0.68 -0.3 15,190 - AO353_00070 0.68 +1.9 15,190 - AO353_00070 0.68 -2.8 15,321 - AO353_00070 0.85 -0.2 15,321 - AO353_00070 0.85 +0.9 15,321 - AO353_00070 0.85 -0.8 15,359 + AO353_00070 0.89 -0.9 15,359 + AO353_00070 0.89 -1.4 15,359 + AO353_00070 0.89 +1.1 15,531 + +2.6 15,531 + +1.8 15,531 + -0.9 15,531 + -2.6 15,531 + -1.5 15,531 + -1.1 15,531 + +0.9 15,532 - +0.5 15,532 - -1.4 15,532 - +0.4 15,646 + -0.2 15,646 + -0.9 15,646 + -2.2 15,646 + -1.1 15,647 - -0.3 15,647 - +1.1 15,653 + +0.5 15,668 + +0.9 15,686 + -1.3 15,687 - -0.4 15,727 + -2.5 15,728 - +0.6 15,728 - +2.7 15,728 - +0.8 15,728 - +1.2 15,728 - +1.7 15,728 - -2.5 15,728 - -0.9 15,842 + -1.6 15,843 - -0.5 15,843 - +2.7 15,843 - +1.3 15,843 - -2.3 15,985 + +1.6 16,004 - +0.4 16,185 + AO353_00075 0.27 +1.3 16,185 + AO353_00075 0.27 -0.3 16,261 + AO353_00075 0.37 +0.9 16,335 + AO353_00075 0.46 -1.4 16,336 - AO353_00075 0.46 +0.2 16,336 - AO353_00075 0.46 -1.4 16,336 - AO353_00075 0.46 -1.1 16,336 - AO353_00075 0.46 +3.1 16,336 - AO353_00075 0.46 +1.1 16,336 - AO353_00075 0.46 -1.1 16,336 - AO353_00075 0.46 -0.4 16,336 - AO353_00075 0.46 -1.1 16,336 - AO353_00075 0.46 +1.3 16,336 - AO353_00075 0.46 +2.4 16,336 - AO353_00075 0.46 +0.6 16,584 + AO353_00075 0.76 +1.2 16,584 + AO353_00075 0.76 +2.2 16,584 + AO353_00075 0.76 +2.6 16,584 + AO353_00075 0.76 -1.5 16,584 + AO353_00075 0.76 -0.9 16,584 + AO353_00075 0.76 -0.5 16,584 + AO353_00075 0.76 +0.4 16,585 - AO353_00075 0.77 +0.8 16,585 - AO353_00075 0.77 +1.6 16,585 - AO353_00075 0.77 +0.8 16,585 - AO353_00075 0.77 +1.2 16,805 + -2.1 16,806 - +0.3 16,806 - -0.5 16,954 - +1.1 17,167 + AO353_00080 0.39 +2.1 17,167 + AO353_00080 0.39 -1.2 17,167 + AO353_00080 0.39 +0.4 17,167 + AO353_00080 0.39 +0.1 17,167 + AO353_00080 0.39 -1.1 17,167 + AO353_00080 0.39 +0.4 17,167 + AO353_00080 0.39 -0.9 17,167 + AO353_00080 0.39 +0.3 17,167 + AO353_00080 0.39 +2.4 17,167 + AO353_00080 0.39 -0.1 17,167 + AO353_00080 0.39 -0.1 17,167 + AO353_00080 0.39 -1.5 17,167 + AO353_00080 0.39 -0.9 17,167 + AO353_00080 0.39 +1.9 17,168 - AO353_00080 0.39 +2.4 17,168 - AO353_00080 0.39 +1.2 17,168 - AO353_00080 0.39 +0.2 17,168 - AO353_00080 0.39 -0.2 17,168 - AO353_00080 0.39 +0.4 17,168 - AO353_00080 0.39 +0.4 17,168 - AO353_00080 0.39 +0.7 17,168 - AO353_00080 0.39 +1.6 17,168 - AO353_00080 0.39 -0.3 17,168 - AO353_00080 0.39 -0.1 17,168 - AO353_00080 0.39 -0.6 17,514 + +3.1 17,514 + -0.9 17,514 + +0.9 17,514 + +1.9 17,515 - +0.2 17,515 - -0.6 17,515 - +0.5 17,515 - +1.9 17,515 - -1.4 17,518 + -1.2 17,518 + -0.2 17,518 + +1.2 17,518 + -0.3 17,519 - +0.4 17,519 - -1.2 17,519 - +0.5 17,519 - +0.1 17,519 - +0.5 17,519 - +0.7 17,532 - +1.1 17,589 + +2.6 17,589 + +0.5 17,590 - -2.5 17,607 - AO353_00085 0.11 +0.8 17,673 - AO353_00085 0.20 -2.0 17,755 + AO353_00085 0.32 +2.9
Or see this region's nucleotide sequence