Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03635

Experiment: L-Citrulline

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03630 and AO353_03635 are separated by 245 nucleotidesAO353_03635 and AO353_03640 are separated by 139 nucleotidesAO353_03640 and AO353_03645 are separated by 143 nucleotides AO353_03630: AO353_03630 - porin, at 773,796 to 775,154 _03630 AO353_03635: AO353_03635 - mechanosensitive ion channel protein MscS, at 775,400 to 776,236 _03635 AO353_03640: AO353_03640 - nucleotide-binding protein, at 776,376 to 776,861 _03640 AO353_03645: AO353_03645 - 2-dehydropantoate 2-reductase, at 777,005 to 777,922 _03645 Position (kb) 775 776 777Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 774.453 kb on + strand, within AO353_03630at 774.453 kb on + strand, within AO353_03630at 774.453 kb on + strand, within AO353_03630at 774.453 kb on + strand, within AO353_03630at 774.453 kb on + strand, within AO353_03630at 774.454 kb on - strand, within AO353_03630at 774.454 kb on - strand, within AO353_03630at 774.464 kb on + strand, within AO353_03630at 774.464 kb on + strand, within AO353_03630at 774.464 kb on + strand, within AO353_03630at 774.464 kb on + strand, within AO353_03630at 774.464 kb on + strand, within AO353_03630at 774.465 kb on - strand, within AO353_03630at 774.465 kb on - strand, within AO353_03630at 774.465 kb on - strand, within AO353_03630at 774.465 kb on - strand, within AO353_03630at 774.465 kb on - strand, within AO353_03630at 774.468 kb on + strand, within AO353_03630at 774.468 kb on + strand, within AO353_03630at 774.501 kb on + strand, within AO353_03630at 774.501 kb on + strand, within AO353_03630at 774.502 kb on - strand, within AO353_03630at 774.534 kb on + strand, within AO353_03630at 774.534 kb on + strand, within AO353_03630at 774.534 kb on + strand, within AO353_03630at 774.537 kb on + strand, within AO353_03630at 774.537 kb on + strand, within AO353_03630at 774.538 kb on - strand, within AO353_03630at 774.552 kb on + strand, within AO353_03630at 774.552 kb on + strand, within AO353_03630at 774.552 kb on + strand, within AO353_03630at 774.552 kb on + strand, within AO353_03630at 774.552 kb on + strand, within AO353_03630at 774.552 kb on + strand, within AO353_03630at 774.553 kb on - strand, within AO353_03630at 774.553 kb on - strand, within AO353_03630at 774.553 kb on - strand, within AO353_03630at 774.603 kb on + strand, within AO353_03630at 774.657 kb on + strand, within AO353_03630at 774.657 kb on + strand, within AO353_03630at 774.658 kb on - strand, within AO353_03630at 774.658 kb on - strand, within AO353_03630at 774.658 kb on - strand, within AO353_03630at 774.731 kb on + strand, within AO353_03630at 774.731 kb on + strand, within AO353_03630at 774.732 kb on - strand, within AO353_03630at 774.732 kb on - strand, within AO353_03630at 774.732 kb on - strand, within AO353_03630at 774.744 kb on + strand, within AO353_03630at 774.744 kb on + strand, within AO353_03630at 774.745 kb on - strand, within AO353_03630at 774.745 kb on - strand, within AO353_03630at 774.745 kb on - strand, within AO353_03630at 774.745 kb on - strand, within AO353_03630at 774.754 kb on + strand, within AO353_03630at 774.755 kb on - strand, within AO353_03630at 774.755 kb on - strand, within AO353_03630at 774.807 kb on + strand, within AO353_03630at 774.807 kb on + strand, within AO353_03630at 774.807 kb on + strand, within AO353_03630at 774.808 kb on - strand, within AO353_03630at 774.808 kb on - strand, within AO353_03630at 774.808 kb on - strand, within AO353_03630at 774.847 kb on + strand, within AO353_03630at 774.847 kb on + strand, within AO353_03630at 774.848 kb on - strand, within AO353_03630at 774.852 kb on + strand, within AO353_03630at 774.853 kb on - strand, within AO353_03630at 774.874 kb on - strand, within AO353_03630at 774.874 kb on - strand, within AO353_03630at 774.906 kb on + strand, within AO353_03630at 774.906 kb on + strand, within AO353_03630at 774.966 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.017 kb on + strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.018 kb on - strand, within AO353_03630at 775.107 kb on - strandat 775.165 kb on + strandat 775.165 kb on + strandat 775.165 kb on + strandat 775.166 kb on - strandat 775.182 kb on + strandat 775.182 kb on + strandat 775.183 kb on - strandat 775.183 kb on - strandat 775.184 kb on + strandat 775.184 kb on + strandat 775.185 kb on - strandat 775.185 kb on - strandat 775.185 kb on - strandat 775.244 kb on + strandat 775.244 kb on + strandat 775.245 kb on - strandat 775.254 kb on + strandat 775.272 kb on + strandat 775.273 kb on - strandat 775.285 kb on + strandat 775.285 kb on + strandat 775.285 kb on + strandat 775.319 kb on + strandat 775.320 kb on - strandat 775.363 kb on + strandat 775.364 kb on - strandat 775.383 kb on + strandat 775.383 kb on + strandat 775.383 kb on + strandat 775.383 kb on + strandat 775.383 kb on + strandat 775.383 kb on + strandat 775.384 kb on - strandat 775.384 kb on - strandat 775.384 kb on - strandat 775.384 kb on - strandat 775.386 kb on + strandat 775.386 kb on + strandat 775.387 kb on - strandat 775.387 kb on - strandat 775.387 kb on - strandat 775.387 kb on - strandat 775.387 kb on - strandat 775.402 kb on - strandat 775.420 kb on + strandat 775.420 kb on + strandat 775.420 kb on + strandat 775.453 kb on + strandat 775.453 kb on + strandat 775.453 kb on + strandat 775.453 kb on + strandat 775.454 kb on - strandat 775.454 kb on - strandat 775.513 kb on - strand, within AO353_03635at 775.513 kb on - strand, within AO353_03635at 775.550 kb on - strand, within AO353_03635at 775.550 kb on - strand, within AO353_03635at 775.550 kb on - strand, within AO353_03635at 775.665 kb on + strand, within AO353_03635at 775.741 kb on + strand, within AO353_03635at 775.742 kb on - strand, within AO353_03635at 775.742 kb on - strand, within AO353_03635at 775.742 kb on - strand, within AO353_03635at 775.742 kb on - strand, within AO353_03635at 775.742 kb on - strand, within AO353_03635at 776.042 kb on - strand, within AO353_03635at 776.042 kb on - strand, within AO353_03635at 776.042 kb on - strand, within AO353_03635at 776.042 kb on - strand, within AO353_03635at 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.228 kb on + strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.229 kb on - strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.238 kb on + strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.239 kb on - strandat 776.269 kb on + strandat 776.270 kb on - strandat 776.327 kb on + strandat 776.327 kb on + strandat 776.327 kb on + strandat 776.327 kb on + strandat 776.327 kb on + strandat 776.327 kb on + strandat 776.327 kb on + strandat 776.328 kb on - strandat 776.328 kb on - strandat 776.328 kb on - strandat 776.478 kb on + strand, within AO353_03640at 776.479 kb on - strand, within AO353_03640at 776.611 kb on + strand, within AO353_03640at 776.611 kb on + strand, within AO353_03640at 776.611 kb on + strand, within AO353_03640at 776.611 kb on + strand, within AO353_03640at 776.611 kb on + strand, within AO353_03640at 776.611 kb on + strand, within AO353_03640at 776.611 kb on + strand, within AO353_03640at 776.611 kb on + strand, within AO353_03640at 776.612 kb on - strand, within AO353_03640at 776.612 kb on - strand, within AO353_03640at 776.612 kb on - strand, within AO353_03640at 776.612 kb on - strand, within AO353_03640at 776.612 kb on - strand, within AO353_03640at 776.612 kb on - strand, within AO353_03640at 776.623 kb on - strand, within AO353_03640at 776.623 kb on - strand, within AO353_03640at 776.863 kb on + strandat 776.863 kb on + strandat 776.863 kb on + strandat 776.863 kb on + strandat 776.863 kb on + strandat 776.863 kb on + strandat 776.863 kb on + strandat 776.863 kb on + strandat 776.863 kb on + strandat 776.864 kb on - strandat 776.864 kb on - strandat 776.864 kb on - strandat 776.864 kb on - strandat 776.864 kb on - strandat 776.864 kb on - strandat 776.864 kb on - strandat 776.864 kb on - strandat 776.876 kb on - strandat 776.895 kb on - strandat 776.938 kb on + strandat 776.938 kb on + strandat 776.939 kb on - strandat 776.939 kb on - strandat 776.939 kb on - strandat 776.939 kb on - strandat 776.939 kb on - strandat 776.939 kb on - strandat 776.940 kb on + strandat 776.940 kb on + strandat 776.941 kb on - strandat 776.951 kb on + strandat 776.951 kb on + strandat 776.951 kb on + strandat 776.959 kb on + strandat 776.959 kb on + strandat 776.960 kb on - strandat 776.960 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline
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774,453 + AO353_03630 0.48 -1.9
774,453 + AO353_03630 0.48 -3.2
774,453 + AO353_03630 0.48 -0.7
774,453 + AO353_03630 0.48 -0.5
774,453 + AO353_03630 0.48 -0.1
774,454 - AO353_03630 0.48 -0.9
774,454 - AO353_03630 0.48 -0.7
774,464 + AO353_03630 0.49 -0.9
774,464 + AO353_03630 0.49 -1.5
774,464 + AO353_03630 0.49 +0.6
774,464 + AO353_03630 0.49 -1.2
774,464 + AO353_03630 0.49 -0.5
774,465 - AO353_03630 0.49 -1.6
774,465 - AO353_03630 0.49 +0.6
774,465 - AO353_03630 0.49 -0.5
774,465 - AO353_03630 0.49 +0.9
774,465 - AO353_03630 0.49 -1.1
774,468 + AO353_03630 0.49 -1.6
774,468 + AO353_03630 0.49 -2.1
774,501 + AO353_03630 0.52 -1.1
774,501 + AO353_03630 0.52 +0.3
774,502 - AO353_03630 0.52 -2.1
774,534 + AO353_03630 0.54 +0.5
774,534 + AO353_03630 0.54 -0.5
774,534 + AO353_03630 0.54 -1.8
774,537 + AO353_03630 0.55 -1.5
774,537 + AO353_03630 0.55 -0.7
774,538 - AO353_03630 0.55 +0.3
774,552 + AO353_03630 0.56 -0.1
774,552 + AO353_03630 0.56 -0.5
774,552 + AO353_03630 0.56 -1.3
774,552 + AO353_03630 0.56 -1.1
774,552 + AO353_03630 0.56 -1.7
774,552 + AO353_03630 0.56 -0.5
774,553 - AO353_03630 0.56 -1.1
774,553 - AO353_03630 0.56 +1.9
774,553 - AO353_03630 0.56 -1.6
774,603 + AO353_03630 0.59 -0.7
774,657 + AO353_03630 0.63 +1.0
774,657 + AO353_03630 0.63 -1.5
774,658 - AO353_03630 0.63 -0.1
774,658 - AO353_03630 0.63 -2.3
774,658 - AO353_03630 0.63 +0.3
774,731 + AO353_03630 0.69 -0.5
774,731 + AO353_03630 0.69 -2.7
774,732 - AO353_03630 0.69 -0.7
774,732 - AO353_03630 0.69 -0.1
774,732 - AO353_03630 0.69 -0.9
774,744 + AO353_03630 0.70 -1.9
774,744 + AO353_03630 0.70 +0.3
774,745 - AO353_03630 0.70 -2.0
774,745 - AO353_03630 0.70 -0.5
774,745 - AO353_03630 0.70 +0.3
774,745 - AO353_03630 0.70 -1.8
774,754 + AO353_03630 0.70 -1.9
774,755 - AO353_03630 0.71 -1.1
774,755 - AO353_03630 0.71 -0.9
774,807 + AO353_03630 0.74 -1.3
774,807 + AO353_03630 0.74 -1.1
774,807 + AO353_03630 0.74 -1.5
774,808 - AO353_03630 0.74 -0.1
774,808 - AO353_03630 0.74 +0.3
774,808 - AO353_03630 0.74 -0.7
774,847 + AO353_03630 0.77 -1.5
774,847 + AO353_03630 0.77 -1.1
774,848 - AO353_03630 0.77 -1.3
774,852 + AO353_03630 0.78 +0.9
774,853 - AO353_03630 0.78 -1.1
774,874 - AO353_03630 0.79 -2.1
774,874 - AO353_03630 0.79 -2.1
774,906 + AO353_03630 0.82 -1.5
774,906 + AO353_03630 0.82 -0.7
774,966 + AO353_03630 0.86 -2.2
775,017 + AO353_03630 0.90 -0.9
775,017 + AO353_03630 0.90 -0.5
775,017 + AO353_03630 0.90 -1.1
775,017 + AO353_03630 0.90 -0.7
775,017 + AO353_03630 0.90 -0.7
775,017 + AO353_03630 0.90 -1.3
775,017 + AO353_03630 0.90 -1.1
775,017 + AO353_03630 0.90 -0.5
775,017 + AO353_03630 0.90 -0.7
775,017 + AO353_03630 0.90 -0.9
775,017 + AO353_03630 0.90 -0.1
775,017 + AO353_03630 0.90 -1.9
775,017 + AO353_03630 0.90 +0.1
775,017 + AO353_03630 0.90 -0.5
775,017 + AO353_03630 0.90 -0.1
775,018 - AO353_03630 0.90 +0.3
775,018 - AO353_03630 0.90 -1.5
775,018 - AO353_03630 0.90 -1.1
775,018 - AO353_03630 0.90 +1.9
775,018 - AO353_03630 0.90 -0.1
775,018 - AO353_03630 0.90 -1.1
775,018 - AO353_03630 0.90 -0.9
775,018 - AO353_03630 0.90 -1.5
775,018 - AO353_03630 0.90 -1.6
775,018 - AO353_03630 0.90 +0.4
775,018 - AO353_03630 0.90 -1.0
775,018 - AO353_03630 0.90 -0.7
775,018 - AO353_03630 0.90 -0.5
775,018 - AO353_03630 0.90 -0.5
775,018 - AO353_03630 0.90 -2.1
775,018 - AO353_03630 0.90 -1.3
775,107 - -2.6
775,165 + -1.3
775,165 + -1.4
775,165 + -1.3
775,166 - +2.3
775,182 + -1.5
775,182 + -1.1
775,183 - -0.7
775,183 - -1.3
775,184 + +0.9
775,184 + -1.5
775,185 - -1.1
775,185 - -1.7
775,185 - -3.2
775,244 + -0.7
775,244 + +1.4
775,245 - -1.1
775,254 + +1.6
775,272 + -0.0
775,273 - +0.8
775,285 + +1.2
775,285 + -1.3
775,285 + -0.3
775,319 + -0.5
775,320 - -0.9
775,363 + -1.3
775,364 - -1.7
775,383 + +0.9
775,383 + -0.9
775,383 + +0.7
775,383 + +0.7
775,383 + +0.7
775,383 + -1.5
775,384 - -0.3
775,384 - -0.4
775,384 - +1.5
775,384 - +0.7
775,386 + -0.0
775,386 + -0.1
775,387 - -0.7
775,387 - +0.1
775,387 - +0.9
775,387 - +0.5
775,387 - -1.3
775,402 - -0.7
775,420 + +1.2
775,420 + -0.7
775,420 + -0.8
775,453 + +1.4
775,453 + +0.5
775,453 + +1.6
775,453 + +0.2
775,454 - -1.1
775,454 - -0.7
775,513 - AO353_03635 0.14 +2.0
775,513 - AO353_03635 0.14 +1.6
775,550 - AO353_03635 0.18 +1.3
775,550 - AO353_03635 0.18 +1.8
775,550 - AO353_03635 0.18 +1.4
775,665 + AO353_03635 0.32 +0.1
775,741 + AO353_03635 0.41 +0.2
775,742 - AO353_03635 0.41 +1.1
775,742 - AO353_03635 0.41 +1.2
775,742 - AO353_03635 0.41 +1.4
775,742 - AO353_03635 0.41 +2.0
775,742 - AO353_03635 0.41 +1.5
776,042 - AO353_03635 0.77 +3.2
776,042 - AO353_03635 0.77 +1.6
776,042 - AO353_03635 0.77 +1.0
776,042 - AO353_03635 0.77 +2.3
776,228 + +1.8
776,228 + -0.6
776,228 + +1.4
776,228 + +0.9
776,228 + +1.0
776,228 + +0.5
776,228 + +3.0
776,228 + -2.6
776,228 + +0.3
776,228 + +1.4
776,228 + +0.6
776,228 + +1.8
776,228 + +0.8
776,228 + -0.0
776,228 + +0.5
776,228 + +1.7
776,228 + -0.1
776,228 + +0.1
776,228 + +1.6
776,228 + +0.7
776,228 + +1.1
776,228 + +1.1
776,228 + +0.6
776,228 + +1.1
776,228 + -0.5
776,229 - +2.1
776,229 - +2.0
776,229 - +1.0
776,229 - +1.5
776,229 - -0.3
776,229 - +0.7
776,229 - +1.4
776,229 - +1.6
776,229 - +2.2
776,229 - +1.0
776,229 - +1.3
776,229 - +1.2
776,229 - +0.0
776,229 - +0.8
776,229 - +0.4
776,229 - +2.2
776,229 - +3.4
776,229 - -0.7
776,229 - +1.1
776,229 - +1.9
776,238 + +0.8
776,238 + +1.4
776,238 + +0.4
776,238 + +2.5
776,238 + -0.4
776,238 + +1.6
776,238 + -0.5
776,238 + +1.1
776,238 + -2.4
776,238 + +1.7
776,238 + +1.9
776,238 + -0.8
776,238 + +1.6
776,238 + +0.5
776,238 + +0.6
776,238 + -0.2
776,238 + +1.1
776,239 - +2.4
776,239 - -0.0
776,239 - +1.3
776,239 - -0.1
776,239 - +1.6
776,239 - +0.9
776,239 - -1.3
776,239 - +2.6
776,239 - +0.3
776,239 - -0.5
776,239 - +0.6
776,239 - +1.4
776,239 - -0.4
776,239 - +1.7
776,239 - +0.9
776,239 - +1.4
776,239 - +1.8
776,269 + +1.1
776,270 - -0.9
776,327 + +0.7
776,327 + +1.6
776,327 + +0.9
776,327 + -0.3
776,327 + +1.2
776,327 + -1.6
776,327 + -0.6
776,328 - -1.9
776,328 - +0.2
776,328 - -2.0
776,478 + AO353_03640 0.21 -1.7
776,479 - AO353_03640 0.21 +1.6
776,611 + AO353_03640 0.48 +0.3
776,611 + AO353_03640 0.48 +0.3
776,611 + AO353_03640 0.48 +1.2
776,611 + AO353_03640 0.48 -0.6
776,611 + AO353_03640 0.48 -2.3
776,611 + AO353_03640 0.48 -1.7
776,611 + AO353_03640 0.48 -0.9
776,611 + AO353_03640 0.48 -0.5
776,612 - AO353_03640 0.49 -0.9
776,612 - AO353_03640 0.49 -1.5
776,612 - AO353_03640 0.49 +0.5
776,612 - AO353_03640 0.49 -1.5
776,612 - AO353_03640 0.49 +0.3
776,612 - AO353_03640 0.49 -0.9
776,623 - AO353_03640 0.51 +0.3
776,623 - AO353_03640 0.51 +2.3
776,863 + -1.1
776,863 + +1.9
776,863 + +0.3
776,863 + +0.1
776,863 + -0.5
776,863 + -0.2
776,863 + +2.1
776,863 + -1.3
776,863 + +1.3
776,864 - -1.5
776,864 - -0.7
776,864 - -2.4
776,864 - +2.7
776,864 - -1.5
776,864 - +0.6
776,864 - -0.9
776,864 - +0.3
776,876 - +0.2
776,895 - -0.9
776,938 + -1.1
776,938 + -2.2
776,939 - -0.1
776,939 - -2.0
776,939 - -0.7
776,939 - -0.5
776,939 - +0.9
776,939 - +0.4
776,940 + +0.0
776,940 + +3.1
776,941 - +2.5
776,951 + -2.4
776,951 + -0.3
776,951 + +0.1
776,959 + +1.9
776,959 + -0.5
776,960 - -0.3
776,960 - +0.9

Or see this region's nucleotide sequence