Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17400

Experiment: L-Ornithine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Ornithine
3,843,601	+		AO353_17395	0.27	-1.2
3,843,601	+		AO353_17395	0.27	-2.5
3,843,601	+		AO353_17395	0.27	-0.8
3,843,602	-		AO353_17395	0.27	-1.8
3,843,602	-		AO353_17395	0.27	-0.2
3,843,846	+		AO353_17395	0.47	-0.2
3,843,910	+		AO353_17395	0.52	-1.0
3,843,910	+		AO353_17395	0.52	+0.0
3,843,911	-		AO353_17395	0.52	+1.6
3,843,984	+		AO353_17395	0.58	-2.0
3,843,984	+		AO353_17395	0.58	-1.6
3,843,984	+		AO353_17395	0.58	+0.4
3,843,984	+		AO353_17395	0.58	-0.0
3,844,170	+		AO353_17395	0.74	-0.8
3,844,226	-		AO353_17395	0.78	+0.9
3,844,432	+				-0.6
3,844,432	+				-0.0
3,844,432	+				-2.3
3,844,432	+				+0.9
3,844,433	-				-0.8
3,844,433	-				+1.2
3,844,433	-				+2.1
3,844,433	-				-0.3
3,844,433	-				-0.2
3,844,433	-				-1.0
3,844,485	+				-0.2
3,844,485	+				+0.2
3,844,485	+				+2.0
3,844,485	+				+2.4
3,844,486	-				+0.6
3,844,486	-				-1.0
3,844,522	+				-1.0
3,844,600	+		AO353_17400	0.13	+0.6
3,844,600	+		AO353_17400	0.13	-2.4
3,844,601	-		AO353_17400	0.13	-1.4
3,844,714	-		AO353_17400	0.25	-2.4
3,844,714	-		AO353_17400	0.25	+1.6
3,844,714	-		AO353_17400	0.25	-0.6
3,844,756	-		AO353_17400	0.30	+1.3
3,844,756	-		AO353_17400	0.30	-1.6
3,844,812	+		AO353_17400	0.36	+1.1
3,844,812	+		AO353_17400	0.36	-3.1
3,844,812	+		AO353_17400	0.36	-1.9
3,844,813	-		AO353_17400	0.36	-2.9
3,844,813	-		AO353_17400	0.36	-0.8
3,845,073	+		AO353_17400	0.64	-1.2
3,845,073	+		AO353_17400	0.64	-0.9
3,845,073	+		AO353_17400	0.64	-2.5
3,845,073	+		AO353_17400	0.64	+1.6
3,845,073	+		AO353_17400	0.64	-1.2
3,845,074	-		AO353_17400	0.64	+0.8
3,845,074	-		AO353_17400	0.64	-0.9
3,845,074	-		AO353_17400	0.64	-1.6
3,845,074	-		AO353_17400	0.64	+1.8
3,845,074	-		AO353_17400	0.64	-1.3
3,845,074	-		AO353_17400	0.64	+0.6
3,845,074	-		AO353_17400	0.64	+3.9
3,845,074	-		AO353_17400	0.64	-0.3
3,845,074	-		AO353_17400	0.64	-1.9
3,845,074	-		AO353_17400	0.64	+1.9
3,845,074	-		AO353_17400	0.64	-1.8
3,845,168	+		AO353_17400	0.74	+0.6
3,845,168	+		AO353_17400	0.74	-0.9
3,845,169	-		AO353_17400	0.74	-1.4
3,845,174	+		AO353_17400	0.75	-1.4
3,845,174	+		AO353_17400	0.75	-0.8
3,845,174	+		AO353_17400	0.75	+0.8
3,845,174	+		AO353_17400	0.75	+1.3
3,845,175	-		AO353_17400	0.75	+1.0
3,845,175	-		AO353_17400	0.75	-0.9
3,845,175	-		AO353_17400	0.75	+0.2
3,845,175	-		AO353_17400	0.75	-1.1
3,845,175	-		AO353_17400	0.75	+1.2
3,845,175	-		AO353_17400	0.75	+1.9
3,845,405	-				-1.0
3,845,405	-				-3.0
3,845,446	+				+0.3
3,845,446	+				-0.1
3,845,447	-				-0.4
3,845,452	+				-1.6
3,845,452	+				-1.6
3,845,453	-				-1.4
3,845,453	-				+1.9
3,845,474	+				+0.6
3,845,474	+				-0.0
3,845,474	+				+0.1
3,845,474	+				-0.0
3,845,474	+				-1.9
3,845,474	+				+1.9
3,845,475	-				+0.1
3,845,481	-				-1.2
3,845,481	-				+0.6
3,845,481	-				+0.9
3,845,481	-				+1.0
3,845,498	+				-0.4
3,845,498	+				-0.2
3,845,498	+				-1.0
3,845,499	-				-0.1
3,845,499	-				+0.1
3,845,499	-				+0.7
3,845,499	-				-1.7
3,845,499	-				-2.0
3,845,578	+				-3.1
3,845,617	-				+2.2
3,845,617	-				+0.4
3,845,617	-				-1.0
3,845,683	+				-0.2
3,845,683	+				+0.6
3,845,684	-				-2.1
3,845,684	-				-0.4
3,845,684	-				+1.8
3,845,684	-				-0.4
3,845,702	+				-2.8
3,845,702	+				-1.2
3,845,702	+				+1.4
3,845,702	+				+0.1
3,845,702	+				+0.6
3,845,702	+				+0.2
3,845,702	+				-0.2
3,845,702	+				+0.8
3,845,703	-				-2.0
3,845,703	-				-0.0
3,845,703	-				+2.4
3,845,703	-				+3.1
3,845,703	-				+1.9
3,845,703	-				-0.7
3,845,703	-				-1.4
3,845,703	-				-2.0
3,845,703	-				+2.0
3,845,703	-				-0.5
3,845,703	-				-2.0
3,845,706	+				+0.2
3,845,706	+				-1.9
3,845,706	+				+2.1
3,845,706	+				+3.9
3,845,706	+				+0.4
3,845,706	+				-1.6
3,845,706	+				+0.1
3,845,706	+				+0.2
3,845,706	+				-0.0
3,845,706	+				-1.8
3,845,706	+				+0.6
3,845,706	+				+0.7
3,845,706	+				-1.1
3,845,706	+				+1.8
3,845,706	+				-0.0
3,845,707	-				+1.6
3,845,707	-				+1.8
3,845,707	-				-1.4
3,845,707	-				-1.6
3,845,707	-				-1.0
3,845,709	+				-1.3
3,845,709	+				-1.1
3,845,709	+				+0.4
3,845,710	-				-1.0
3,845,710	-				+1.6
3,845,710	-				+1.3
3,845,710	-				+1.6
3,845,710	-				-1.2
3,845,710	-				+1.1
3,845,717	+				+2.4
3,845,743	+				-1.4
3,845,744	-				+0.1
3,845,744	-				-0.3
3,845,744	-				-1.0
3,845,752	+				+2.6
3,845,752	+				+1.7
3,845,752	+				-0.4
3,845,752	+				+0.2
3,845,752	+				-0.4
3,845,752	+				-1.0
3,845,752	+				+0.6
3,845,753	-				-1.1
3,845,753	-				-0.3
3,845,753	-				+1.0
3,845,774	-				+2.3
3,845,828	+				-0.2
3,845,828	+				+0.2
3,845,828	+				+2.8
3,845,828	+				-1.8
3,845,828	+				+1.1
3,845,828	+				+1.6
3,845,829	-				-0.2
3,845,829	-				-0.6
3,845,829	-				-0.8
3,845,829	-				-2.0
3,845,966	+		AO353_17405	0.30	+1.0
3,845,966	+		AO353_17405	0.30	-0.1
3,845,966	+		AO353_17405	0.30	+0.2
3,845,966	+		AO353_17405	0.30	+0.8
3,845,966	+		AO353_17405	0.30	+2.1
3,845,967	-		AO353_17405	0.30	-0.4
3,845,967	-		AO353_17405	0.30	+1.6
3,845,967	-		AO353_17405	0.30	-0.3
3,845,967	-		AO353_17405	0.30	-0.5
3,846,071	+		AO353_17405	0.48	+1.6
3,846,071	+		AO353_17405	0.48	+1.6
3,846,071	+		AO353_17405	0.48	+2.6
3,846,071	+		AO353_17405	0.48	+0.6
3,846,072	-		AO353_17405	0.48	+0.7
3,846,072	-		AO353_17405	0.48	+0.7
3,846,072	-		AO353_17405	0.48	+0.2
3,846,072	-		AO353_17405	0.48	-0.8
3,846,096	+		AO353_17405	0.52	-0.1
3,846,096	+		AO353_17405	0.52	-0.7
3,846,371	+				+1.8
3,846,371	+				-0.6
3,846,372	-				-1.0
3,846,372	-				-0.4
3,846,372	-				-0.4
3,846,400	+				-2.2
3,846,401	-				+2.0
3,846,401	-				-2.0
3,846,401	-				-2.5