Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06515

Experiment: L-Ornithine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Ornithine
1,449,462	-		AO353_06505	0.86	-2.2
1,449,462	-		AO353_06505	0.86	-1.1
1,449,462	-		AO353_06505	0.86	+1.1
1,449,462	-		AO353_06505	0.86	-0.8
1,449,462	-		AO353_06505	0.86	+1.0
1,449,463	+		AO353_06505	0.86	+2.4
1,449,463	+		AO353_06505	0.86	-0.2
1,449,463	+		AO353_06505	0.86	+2.1
1,449,463	+		AO353_06505	0.86	+0.0
1,449,463	+		AO353_06505	0.86	+0.8
1,449,463	+		AO353_06505	0.86	-1.8
1,449,464	-		AO353_06505	0.86	+0.0
1,449,464	-		AO353_06505	0.86	-0.1
1,449,464	-		AO353_06505	0.86	+1.9
1,449,464	-		AO353_06505	0.86	+1.8
1,449,542	+				+1.6
1,449,623	+				-1.0
1,449,623	+				-2.2
1,449,623	+				-2.1
1,449,623	+				+0.3
1,449,623	+				+0.4
1,449,623	+				-1.3
1,449,623	+				+1.5
1,449,623	+				-1.2
1,449,623	+				-1.2
1,449,623	+				+1.3
1,449,623	+				+0.0
1,449,623	+				+0.3
1,449,623	+				+0.9
1,449,623	+				+0.0
1,449,624	-				-2.6
1,449,624	-				+1.0
1,449,624	-				-0.4
1,449,624	-				+0.9
1,449,624	-				+0.9
1,449,624	-				-0.8
1,449,624	-				+2.0
1,449,624	-				-1.9
1,449,624	-				+0.7
1,449,624	-				+0.6
1,449,624	-				+0.6
1,449,624	-				+0.1
1,449,636	+				+0.3
1,449,636	+				+1.6
1,449,637	-				-0.2
1,449,637	-				+0.1
1,449,643	-				-1.0
1,449,643	-				+0.0
1,449,643	-				-1.0
1,449,643	-				-0.6
1,449,643	-				-1.0
1,449,643	-				-0.4
1,449,646	-				+1.4
1,449,646	-				+0.0
1,449,646	-				+0.6
1,449,646	-				+0.2
1,449,646	-				+0.2
1,449,646	-				-1.6
1,449,646	-				+0.7
1,449,646	-				+1.2
1,449,646	-				-2.0
1,449,646	-				-0.8
1,449,646	-				+1.6
1,449,655	-				-0.4
1,449,655	-				-0.4
1,449,720	+				+0.9
1,449,720	+				+0.9
1,449,798	+				-0.3
1,449,823	+				+3.2
1,449,851	+				-2.1
1,449,968	+		AO353_06510	0.20	-0.2
1,450,090	+		AO353_06510	0.41	-2.4
1,450,168	+		AO353_06510	0.54	+1.0
1,450,168	+		AO353_06510	0.54	+1.0
1,450,168	+		AO353_06510	0.54	-0.6
1,450,168	+		AO353_06510	0.54	+1.6
1,450,168	+		AO353_06510	0.54	-1.3
1,450,168	+		AO353_06510	0.54	+1.2
1,450,168	+		AO353_06510	0.54	+1.4
1,450,169	-		AO353_06510	0.54	-0.4
1,450,169	-		AO353_06510	0.54	+2.4
1,450,169	-		AO353_06510	0.54	-1.6
1,450,169	-		AO353_06510	0.54	-0.1
1,450,169	-		AO353_06510	0.54	-3.0
1,450,169	-		AO353_06510	0.54	-0.8
1,450,169	-		AO353_06510	0.54	-2.0
1,450,169	-		AO353_06510	0.54	-1.2
1,450,169	-		AO353_06510	0.54	-1.0
1,450,169	-		AO353_06510	0.54	-1.6
1,450,169	-		AO353_06510	0.54	-1.6
1,450,169	-		AO353_06510	0.54	-1.7
1,450,265	+		AO353_06510	0.70	-1.7
1,450,361	+		AO353_06510	0.86	-1.8
1,450,361	+		AO353_06510	0.86	+2.0
1,450,362	-		AO353_06510	0.87	-1.7
1,450,413	+				-0.7
1,450,414	-				-2.5
1,450,414	-				+0.6
1,450,441	-				-0.7
1,450,452	+				-1.7
1,450,452	+				+0.0
1,450,452	+				-1.3
1,450,452	+				+0.7
1,450,588	+		AO353_06515	0.19	+0.7
1,450,750	+		AO353_06515	0.42	-0.3
1,450,844	+		AO353_06515	0.55	+0.8
1,450,844	+		AO353_06515	0.55	-1.6
1,450,844	+		AO353_06515	0.55	+1.1
1,450,844	+		AO353_06515	0.55	+0.1
1,450,845	-		AO353_06515	0.55	-0.7
1,450,845	-		AO353_06515	0.55	-0.4
1,450,845	-		AO353_06515	0.55	+2.3
1,450,856	-		AO353_06515	0.56	+4.7
1,450,856	-		AO353_06515	0.56	+2.4
1,450,856	-		AO353_06515	0.56	+1.0
1,450,858	+		AO353_06515	0.57	+1.6
1,450,858	+		AO353_06515	0.57	+1.8
1,450,858	+		AO353_06515	0.57	-0.3
1,450,858	+		AO353_06515	0.57	+0.6
1,450,858	+		AO353_06515	0.57	+0.4
1,450,858	+		AO353_06515	0.57	-0.2
1,450,858	+		AO353_06515	0.57	+0.3
1,450,859	-		AO353_06515	0.57	-1.2
1,450,859	-		AO353_06515	0.57	+1.6
1,450,859	-		AO353_06515	0.57	+4.8
1,450,859	-		AO353_06515	0.57	+2.8
1,450,859	-		AO353_06515	0.57	+2.5
1,450,859	-		AO353_06515	0.57	+3.9
1,450,859	-		AO353_06515	0.57	-1.0
1,450,859	-		AO353_06515	0.57	-0.2
1,450,859	-		AO353_06515	0.57	+2.0
1,450,863	-		AO353_06515	0.57	-1.0
1,450,863	-		AO353_06515	0.57	+2.2
1,450,902	+		AO353_06515	0.63	-2.6
1,450,902	+		AO353_06515	0.63	+1.3
1,450,903	-		AO353_06515	0.63	+4.2
1,450,903	-		AO353_06515	0.63	+3.4
1,450,980	+		AO353_06515	0.74	-3.0
1,450,981	-		AO353_06515	0.74	+3.0
1,450,981	-		AO353_06515	0.74	+2.7
1,450,981	-		AO353_06515	0.74	+1.6
1,450,981	-		AO353_06515	0.74	+1.4
1,450,981	-		AO353_06515	0.74	+4.9
1,451,089	-		AO353_06515	0.89	+1.1
1,451,089	-		AO353_06515	0.89	+0.7
1,451,162	+				+0.6
1,451,162	+				+1.6
1,451,163	-				+1.6
1,451,163	-				+1.3
1,451,303	+		AO353_06520	0.37	-0.2
1,451,303	+		AO353_06520	0.37	+1.3
1,451,303	+		AO353_06520	0.37	-2.0
1,451,303	+		AO353_06520	0.37	-0.7
1,451,303	+		AO353_06520	0.37	-0.7
1,451,303	+		AO353_06520	0.37	-2.6
1,451,303	+		AO353_06520	0.37	-0.1
1,451,303	+		AO353_06520	0.37	-1.2
1,451,303	+		AO353_06520	0.37	+0.1
1,451,304	-		AO353_06520	0.38	-1.4
1,451,304	-		AO353_06520	0.38	+2.0
1,451,304	-		AO353_06520	0.38	-0.4
1,451,304	-		AO353_06520	0.38	-1.0
1,451,304	-		AO353_06520	0.38	+4.0
1,451,305	+		AO353_06520	0.38	+0.6
1,451,305	+		AO353_06520	0.38	-0.5
1,451,348	+		AO353_06520	0.50	-1.7
1,451,348	+		AO353_06520	0.50	-0.4
1,451,348	+		AO353_06520	0.50	+0.4
1,451,349	-		AO353_06520	0.50	+1.0
1,451,349	-		AO353_06520	0.50	-1.1
1,451,458	+		AO353_06520	0.80	+2.3
1,451,461	+		AO353_06520	0.81	+0.2
1,451,462	-		AO353_06520	0.81	+2.0
1,451,462	-		AO353_06520	0.81	+2.0
1,451,462	-		AO353_06520	0.81	+0.0
1,451,462	-		AO353_06520	0.81	+1.9
1,451,462	-		AO353_06520	0.81	+4.9
1,451,462	-		AO353_06520	0.81	+1.9
1,451,462	-		AO353_06520	0.81	-2.4
1,451,462	-		AO353_06520	0.81	+2.8
1,451,521	+				+1.0
1,451,521	+				+0.0
1,451,521	+				+3.1
1,451,521	+				-2.6
1,451,521	+				+1.9
1,451,522	-				+0.0
1,451,522	-				+1.6
1,451,522	-				+0.8
1,451,522	-				+2.6
1,451,522	-				-0.3
1,451,522	-				-1.2
1,451,522	-				+2.1
1,451,522	-				+0.0
1,451,522	-				+1.3
1,451,574	+				-0.2
1,451,574	+				-1.6
1,451,574	+				-1.2
1,451,574	+				+0.3
1,451,574	+				-0.4
1,451,574	+				+1.8
1,451,574	+				-1.3
1,451,575	-				-0.7
1,451,575	-				+2.7
1,451,575	-				-2.2
1,451,575	-				+0.6
1,451,575	-				-1.2
1,451,575	-				+4.4
1,451,575	-				+4.0
1,451,575	-				+0.6
1,451,576	+				+0.1
1,451,576	+				-1.2
1,451,576	+				-0.6
1,451,576	+				+1.8
1,451,576	+				-0.7
1,451,576	+				-2.4
1,451,576	+				+0.5
1,451,576	+				-1.2
1,451,576	+				-1.0
1,451,576	+				+1.6
1,451,576	+				-1.0
1,451,576	+				+0.8
1,451,576	+				+0.0
1,451,576	+				+0.3
1,451,576	+				-2.5
1,451,576	+				-0.4
1,451,576	+				-0.4
1,451,577	-				-0.4
1,451,577	-				+2.0
1,451,577	-				+0.0
1,451,577	-				-1.6
1,451,577	-				+2.0
1,451,577	-				-1.6
1,451,577	-				+2.7
1,451,577	-				+0.6
1,451,577	-				+2.6
1,451,577	-				-0.7
1,451,577	-				+2.1
1,451,577	-				+0.6
1,451,577	-				+1.4
1,451,577	-				-1.8
1,451,577	-				-1.2
1,451,577	-				+1.9
1,451,577	-				+3.2
1,451,577	-				+2.3
1,451,577	-				-2.3
1,451,592	+				+1.6
1,451,592	+				-1.6
1,451,593	-				+0.6
1,451,615	+				+1.6
1,451,615	+				+1.3
1,451,616	-				+0.3
1,451,616	-				+2.8
1,451,635	+				-2.8
1,451,635	+				+0.3
1,451,635	+				+1.6
1,451,636	-				+3.0
1,451,636	-				+1.8
1,451,652	+				+0.4
1,451,652	+				+0.8
1,451,652	+				-0.3
1,451,652	+				-0.1
1,451,652	+				-1.1
1,451,652	+				-2.1
1,451,652	+				-1.0
1,451,652	+				-2.2
1,451,652	+				+1.1
1,451,653	-				+2.5
1,451,653	-				-0.3
1,451,653	-				-1.0
1,451,653	-				+2.5
1,451,653	-				+1.2
1,451,653	-				+2.9
1,451,653	-				-2.3
1,451,695	+				+0.6
1,451,695	+				+0.9
1,451,696	-				+0.4
1,451,696	-				+0.4
1,451,730	+				+3.6
1,451,730	+				+3.0
1,451,730	+				+0.6
1,451,730	+				+0.6
1,451,730	+				-0.7
1,451,730	+				-0.2
1,451,730	+				+1.4
1,451,731	-				-0.4
1,451,731	-				-0.1
1,451,731	-				+0.2
1,451,731	-				+0.9
1,451,731	-				+0.5
1,451,731	-				+1.2
1,451,731	-				+0.0
1,451,757	+				-0.3
1,451,757	+				+0.2
1,451,757	+				-1.8
1,451,757	+				+1.2
1,451,757	+				-0.4
1,451,758	-				-1.0
1,451,758	-				+1.6
1,451,758	-				+1.4
1,451,758	-				-1.6
1,451,758	-				+1.6
1,451,831	+		AO353_06525	0.23	+1.4
1,451,831	+		AO353_06525	0.23	-1.3
1,451,832	-		AO353_06525	0.24	+0.4
1,451,832	-		AO353_06525	0.24	+0.0
1,451,988	+		AO353_06525	0.58	+0.2
1,451,989	-		AO353_06525	0.58	-1.2
1,451,989	-		AO353_06525	0.58	-1.2
1,451,989	-		AO353_06525	0.58	-1.4
1,452,144	+				+0.0
1,452,144	+				-3.1
1,452,144	+				-1.2
1,452,144	+				+0.4
1,452,144	+				+1.0
1,452,144	+				-1.7
1,452,144	+				+2.4
1,452,144	+				+0.6
1,452,144	+				-1.0
1,452,144	+				+1.0
1,452,145	-				+0.2
1,452,145	-				+0.9
1,452,145	-				+0.8
1,452,145	-				-2.1
1,452,145	-				-0.4
1,452,145	-				+1.2
1,452,145	-				-1.7
1,452,145	-				-0.6
1,452,145	-				+1.8
1,452,145	-				+3.1
1,452,145	-				-2.3