Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05640

Experiment: L-Ornithine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_05635 and AO353_05640 are separated by 258 nucleotidesAO353_05640 and AO353_05645 are separated by 10 nucleotides AO353_05635: AO353_05635 - carbamoyl phosphate synthase small subunit, at 1,245,151 to 1,246,287 _05635 AO353_05640: AO353_05640 - 4-hydroxy-tetrahydrodipicolinate reductase, at 1,246,546 to 1,247,352 _05640 AO353_05645: AO353_05645 - molecular chaperone DnaJ, at 1,247,363 to 1,248,487 _05645 Position (kb) 1246 1247 1248Strain fitness (log2 ratio) -1 0 1 2at 1246.305 kb on - strandat 1246.351 kb on - strandat 1246.351 kb on - strandat 1246.351 kb on - strandat 1246.418 kb on - strandat 1247.365 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Ornithine
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1,246,305 - +0.6
1,246,351 - +2.6
1,246,351 - +1.2
1,246,351 - +1.6
1,246,418 - -0.6
1,247,365 - +0.9

Or see this region's nucleotide sequence