Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22820

Experiment: L-Ornithine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Ornithine
4,999,072	+				-0.7
4,999,072	+				+0.7
4,999,072	+				+0.4
4,999,072	+				-1.1
4,999,073	-				-0.6
4,999,094	+				+0.0
4,999,094	+				+0.8
4,999,094	+				-0.5
4,999,094	+				-0.8
4,999,094	+				+1.2
4,999,095	-				-1.2
4,999,095	-				-0.0
4,999,095	-				+1.0
4,999,095	-				+1.2
4,999,098	-				-0.3
4,999,098	-				-1.7
4,999,107	+				-1.9
4,999,107	+				+0.8
4,999,107	+				-1.8
4,999,108	-				+0.7
4,999,108	-				-0.2
4,999,108	-				-0.2
4,999,169	+				-0.8
4,999,169	+				-1.3
4,999,169	+				+0.7
4,999,169	+				-0.2
4,999,169	+				-0.3
4,999,169	+				+1.4
4,999,169	+				+2.6
4,999,169	+				-0.3
4,999,169	+				+0.7
4,999,169	+				+2.2
4,999,170	-				+1.0
4,999,170	-				-0.2
4,999,170	-				-2.0
4,999,170	-				+0.4
4,999,170	-				-1.8
4,999,294	+		AO353_22815	0.40	-1.7
4,999,533	+				+1.2
4,999,613	+				-1.3
4,999,614	-				-0.6
4,999,664	-				-1.3
4,999,720	+				+4.0
4,999,720	+				+3.4
4,999,720	+				+2.4
4,999,720	+				+1.2
4,999,720	+				+0.8
4,999,720	+				+3.2
4,999,720	+				-1.5
4,999,721	-				+0.1
4,999,721	-				-0.2
4,999,721	-				-0.6
4,999,721	-				-1.8
4,999,721	-				-0.5
4,999,724	+				+0.5
4,999,738	+				-0.0
4,999,738	+				-1.7
4,999,804	+				-0.2
4,999,805	-				-0.9
4,999,805	-				-0.8
4,999,985	+				-1.8
4,999,985	+				+0.4
4,999,986	-				-3.6
4,999,986	-				-1.5
5,000,003	+				-0.9
5,000,003	+				-2.1
5,000,003	+				-0.0
5,000,136	+				-1.9
5,000,136	+				-2.5
5,000,137	-				-2.6
5,000,137	-				+0.2
5,000,137	-				+1.0
5,000,248	+				-1.9
5,000,249	-				+1.0
5,000,249	-				-1.2
5,000,249	-				-3.5
5,000,249	-				-1.8
5,000,260	+				-3.0
5,000,485	+				-1.3
5,000,485	+				-3.1
5,000,485	+				-0.8
5,000,485	+				-1.7
5,000,485	+				-4.0
5,000,485	+				-3.2
5,000,486	-				-1.7
5,000,486	-				-0.3
5,000,486	-				-1.9
5,000,528	+		AO353_22820	0.11	-2.3
5,000,528	+		AO353_22820	0.11	-1.5
5,000,528	+		AO353_22820	0.11	-2.5
5,000,529	-		AO353_22820	0.11	-0.4
5,000,529	-		AO353_22820	0.11	-2.7
5,000,529	-		AO353_22820	0.11	+0.4
5,000,529	-		AO353_22820	0.11	-0.8
5,000,529	-		AO353_22820	0.11	-1.6
5,000,529	-		AO353_22820	0.11	-1.5
5,000,529	-		AO353_22820	0.11	-2.2
5,000,529	-		AO353_22820	0.11	-2.7
5,000,529	-				-1.0
5,000,529	-		AO353_22820	0.11	-0.8
5,000,529	-		AO353_22820	0.11	-3.0
5,000,529	-		AO353_22820	0.11	-2.3
5,000,770	+		AO353_22820	0.15	-0.6
5,000,848	+		AO353_22820	0.17	-1.7
5,000,848	+		AO353_22820	0.17	-2.1
5,000,848	+		AO353_22820	0.17	-1.5
5,000,848	+		AO353_22820	0.17	-0.7
5,000,849	-		AO353_22820	0.17	-0.7
5,000,849	-		AO353_22820	0.17	-3.3
5,000,849	-		AO353_22820	0.17	-1.6
5,000,861	-		AO353_22820	0.17	-2.5
5,000,861	-		AO353_22820	0.17	+1.7
5,000,861	-		AO353_22820	0.17	-3.1
5,000,861	-		AO353_22820	0.17	-2.5
5,000,938	+		AO353_22820	0.19	+0.4
5,000,938	+		AO353_22820	0.19	-0.3
5,000,938	+				-0.0
5,000,938	+		AO353_22820	0.19	-0.8
5,000,939	-		AO353_22820	0.19	-1.8
5,000,939	-		AO353_22820	0.19	-2.5
5,000,939	-		AO353_22820	0.19	-1.7
5,000,939	-		AO353_22820	0.19	-1.9
5,001,004	+		AO353_22820	0.20	-2.5
5,001,004	+		AO353_22820	0.20	-2.0
5,001,004	+		AO353_22820	0.20	+0.2
5,001,005	-		AO353_22820	0.20	+0.4
5,001,046	+		AO353_22820	0.21	-0.7
5,001,046	+		AO353_22820	0.21	-1.3
5,001,047	-		AO353_22820	0.21	-0.3
5,001,047	-		AO353_22820	0.21	-0.5
5,001,047	-		AO353_22820	0.21	-0.0
5,001,047	-		AO353_22820	0.21	-1.3
5,001,047	-		AO353_22820	0.21	-2.3
5,001,128	+				-0.3
5,001,128	+		AO353_22820	0.23	-0.0
5,001,129	-		AO353_22820	0.23	-1.9
5,001,129	-		AO353_22820	0.23	-2.6
5,001,129	-		AO353_22820	0.23	-2.9
5,001,137	+		AO353_22820	0.23	-2.3
5,001,298	+		AO353_22820	0.26	-1.8
5,001,298	+		AO353_22820	0.26	-0.8
5,001,298	+		AO353_22820	0.26	-2.2
5,001,298	+		AO353_22820	0.26	-2.5
5,001,299	-		AO353_22820	0.26	-1.7
5,001,299	-		AO353_22820	0.26	-1.5
5,001,299	-		AO353_22820	0.26	-1.0
5,001,506	-		AO353_22820	0.30	-1.9
5,001,679	+		AO353_22820	0.34	+1.0
5,001,679	+		AO353_22820	0.34	-3.4
5,001,679	+		AO353_22820	0.34	-1.8
5,001,680	-		AO353_22820	0.34	-2.2
5,001,680	-		AO353_22820	0.34	-1.9
5,002,027	+		AO353_22820	0.41	-0.6
5,002,027	+		AO353_22820	0.41	-1.8
5,002,028	-		AO353_22820	0.41	-1.2
5,002,028	-		AO353_22820	0.41	-3.0
5,002,028	-		AO353_22820	0.41	-1.7
5,002,072	+		AO353_22820	0.42	-1.7
5,002,073	-		AO353_22820	0.42	-1.5
5,002,144	+		AO353_22820	0.44	-1.6
5,002,145	-		AO353_22820	0.44	-2.0
5,002,264	+		AO353_22820	0.46	-1.3
5,002,284	+		AO353_22820	0.46	-1.7
5,002,285	-		AO353_22820	0.46	-1.6
5,002,285	-		AO353_22820	0.46	-0.7
5,002,304	-		AO353_22820	0.47	-1.8
5,002,336	+		AO353_22820	0.47	-0.6
5,002,336	+		AO353_22820	0.47	-3.1
5,002,336	+		AO353_22820	0.47	-3.7
5,002,411	+		AO353_22820	0.49	-1.5
5,002,520	+		AO353_22820	0.51	-1.2
5,002,520	+		AO353_22820	0.51	-1.9
5,002,744	+				-0.0
5,002,800	+		AO353_22820	0.57	+6.3
5,002,800	+		AO353_22820	0.57	-2.1
5,002,801	-		AO353_22820	0.57	-1.3
5,002,801	-		AO353_22820	0.57	-1.5
5,002,910	+		AO353_22820	0.59	-1.5
5,002,911	-		AO353_22820	0.59	-2.8
5,003,325	+		AO353_22820	0.68	-2.9
5,003,329	+		AO353_22820	0.68	+2.0
5,003,329	+		AO353_22820	0.68	-0.0
5,003,329	+		AO353_22820	0.68	-0.7
5,003,329	+		AO353_22820	0.68	-1.4
5,003,329	+		AO353_22820	0.68	-2.9
5,003,329	+		AO353_22820	0.68	-2.0
5,003,329	+		AO353_22820	0.68	-0.5
5,003,329	+		AO353_22820	0.68	-1.8
5,003,330	-		AO353_22820	0.68	-0.5
5,003,330	-		AO353_22820	0.68	-1.2
5,003,330	-		AO353_22820	0.68	-1.6
5,003,330	-		AO353_22820	0.68	-1.7
5,003,330	-		AO353_22820	0.68	-2.4
5,003,330	-		AO353_22820	0.68	-2.4
5,003,446	-		AO353_22820	0.70	+0.2
5,003,446	-		AO353_22820	0.70	-1.2
5,003,607	+		AO353_22820	0.73	+0.4
5,003,608	-		AO353_22820	0.73	-1.7
5,003,665	+		AO353_22820	0.75	-3.2
5,003,665	+		AO353_22820	0.75	-0.2
5,003,665	+		AO353_22820	0.75	-1.3
5,003,665	+		AO353_22820	0.75	-3.5
5,003,665	+		AO353_22820	0.75	-0.0
5,003,666	-		AO353_22820	0.75	-0.5
5,003,666	-		AO353_22820	0.75	-1.7
5,003,666	-		AO353_22820	0.75	-0.8
5,003,666	-		AO353_22820	0.75	-1.5
5,003,666	-		AO353_22820	0.75	-2.3
5,003,666	-		AO353_22820	0.75	-1.8
5,003,666	-		AO353_22820	0.75	+1.6
5,003,707	+		AO353_22820	0.75	-4.1
5,003,708	-		AO353_22820	0.75	-3.2
5,003,866	+		AO353_22820	0.79	-2.8
5,003,866	+		AO353_22820	0.79	-1.6
5,003,867	-		AO353_22820	0.79	-1.9
5,003,923	+		AO353_22820	0.80	-2.3
5,003,923	+		AO353_22820	0.80	-1.0
5,003,923	+		AO353_22820	0.80	-3.2
5,003,924	-		AO353_22820	0.80	-0.5
5,004,121	+		AO353_22820	0.84	-2.6
5,004,121	+		AO353_22820	0.84	-1.4
5,004,122	-		AO353_22820	0.84	+0.4
5,004,122	-		AO353_22820	0.84	-1.5
5,004,122	-		AO353_22820	0.84	-0.0
5,004,122	-		AO353_22820	0.84	-2.7
5,004,122	-		AO353_22820	0.84	-3.5
5,004,122	-		AO353_22820	0.84	-2.0
5,004,122	-		AO353_22820	0.84	-1.6
5,004,185	-		AO353_22820	0.85	-1.8
5,004,203	+		AO353_22820	0.86	-1.7
5,004,203	+		AO353_22820	0.86	-2.1
5,004,203	+		AO353_22820	0.86	-0.4
5,004,203	+				-1.2
5,004,203	+		AO353_22820	0.86	-0.4
5,004,204	-		AO353_22820	0.86	-2.4
5,004,204	-		AO353_22820	0.86	-2.2
5,004,460	+				-0.8
5,004,460	+				-0.0
5,004,460	+				-1.2
5,004,460	+				-0.8
5,004,461	-				-2.7
5,004,461	-				-1.8
5,004,461	-				-1.5
5,004,461	-				-1.1
5,004,529	+				-1.0
5,004,565	+				-0.3
5,004,566	-				-1.0
5,004,566	-				-0.4
5,004,811	+				+0.4
5,004,811	+				-0.6
5,004,811	+				-1.8
5,004,812	-				-2.7
5,004,812	-				-1.7
5,004,812	-				-1.7
5,004,812	-				-1.6
5,004,970	-				-0.7
5,005,057	-				-2.0
5,005,060	+				-1.4
5,005,064	+				-0.8
5,005,064	+				-0.6
5,005,153	-				-0.6
5,005,306	+		AO353_22825	0.30	-0.4
5,005,306	+		AO353_22825	0.30	+0.2
5,005,307	-		AO353_22825	0.30	-1.4
5,005,324	+		AO353_22825	0.32	+1.4
5,005,324	+		AO353_22825	0.32	+0.7
5,005,324	+		AO353_22825	0.32	-1.7
5,005,324	+		AO353_22825	0.32	+0.2
5,005,325	-		AO353_22825	0.32	-0.6
5,005,325	-		AO353_22825	0.32	+1.3
5,005,383	-		AO353_22825	0.41	-1.5
5,005,383	-		AO353_22825	0.41	-1.5
5,005,383	-		AO353_22825	0.41	-0.2
5,005,425	-		AO353_22825	0.47	+0.4
5,005,444	+		AO353_22825	0.49	-1.7
5,005,525	+		AO353_22825	0.61	+0.2
5,005,525	+		AO353_22825	0.61	+1.0
5,005,525	+		AO353_22825	0.61	-1.0
5,005,525	+		AO353_22825	0.61	+0.9
5,005,525	+		AO353_22825	0.61	-1.5
5,005,526	-		AO353_22825	0.61	-0.4
5,005,526	-		AO353_22825	0.61	+0.1
5,005,526	-		AO353_22825	0.61	+0.7
5,005,526	-		AO353_22825	0.61	+1.2
5,005,589	-		AO353_22825	0.70	+0.6
5,005,589	-		AO353_22825	0.70	+0.1
5,005,601	-		AO353_22825	0.71	-1.5
5,005,601	-		AO353_22825	0.71	-0.0
5,005,601	-		AO353_22825	0.71	-0.0
5,005,601	-		AO353_22825	0.71	-1.4
5,005,601	-		AO353_22825	0.71	-1.6
5,005,601	-		AO353_22825	0.71	+1.4
5,005,620	-		AO353_22825	0.74	+0.9
5,005,630	+		AO353_22825	0.76	-1.1
5,005,631	-		AO353_22825	0.76	-1.0
5,005,631	-		AO353_22825	0.76	-0.8
5,005,631	-		AO353_22825	0.76	+0.5
5,005,631	-		AO353_22825	0.76	-1.6
5,005,705	+		AO353_22825	0.86	-1.1
5,005,705	+		AO353_22825	0.86	-0.8
5,005,705	+		AO353_22825	0.86	-0.6
5,005,761	+				-0.5
5,005,776	+				-0.8
5,005,794	+				+1.0
5,005,893	+				-2.4
5,005,893	+				-0.8