Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13025

Experiment: L-Ornithine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Ornithine
2,884,377	+				+1.1
2,884,377	+				+0.3
2,884,378	-				-2.9
2,884,378	-				-0.3
2,884,457	+		AO353_13020	0.11	-0.4
2,884,458	-		AO353_13020	0.12	-1.4
2,884,458	-		AO353_13020	0.12	-1.2
2,884,481	+		AO353_13020	0.15	-0.8
2,884,481	+		AO353_13020	0.15	+1.5
2,884,481	+		AO353_13020	0.15	+1.5
2,884,481	+		AO353_13020	0.15	-0.5
2,884,481	+		AO353_13020	0.15	-1.7
2,884,481	+		AO353_13020	0.15	-0.5
2,884,482	-		AO353_13020	0.15	-2.7
2,884,482	-		AO353_13020	0.15	-2.0
2,884,482	-		AO353_13020	0.15	+0.5
2,884,590	+		AO353_13020	0.29	+0.5
2,884,590	+		AO353_13020	0.29	-1.2
2,884,590	+		AO353_13020	0.29	+1.3
2,884,590	+		AO353_13020	0.29	-0.7
2,884,590	+		AO353_13020	0.29	+0.5
2,884,590	+		AO353_13020	0.29	-1.1
2,884,590	+		AO353_13020	0.29	+1.5
2,884,590	+		AO353_13020	0.29	-1.4
2,884,590	+		AO353_13020	0.29	-0.6
2,884,590	+		AO353_13020	0.29	+1.1
2,884,591	-		AO353_13020	0.29	+0.1
2,884,591	-		AO353_13020	0.29	+0.3
2,884,591	-		AO353_13020	0.29	-1.1
2,884,591	-		AO353_13020	0.29	+3.1
2,884,591	-		AO353_13020	0.29	+1.8
2,884,591	-		AO353_13020	0.29	-2.3
2,884,591	-		AO353_13020	0.29	-0.1
2,884,591	-		AO353_13020	0.29	+1.1
2,884,624	+		AO353_13020	0.34	+0.1
2,884,624	+		AO353_13020	0.34	+0.6
2,884,624	+		AO353_13020	0.34	-1.9
2,884,624	+		AO353_13020	0.34	+1.4
2,884,624	+		AO353_13020	0.34	+2.1
2,884,624	+		AO353_13020	0.34	+0.3
2,884,624	+		AO353_13020	0.34	+0.7
2,884,625	-		AO353_13020	0.34	-1.4
2,884,625	-		AO353_13020	0.34	+0.5
2,884,625	-		AO353_13020	0.34	-1.0
2,884,625	-		AO353_13020	0.34	+2.1
2,884,625	-		AO353_13020	0.34	+0.1
2,884,625	-		AO353_13020	0.34	-0.7
2,884,625	-		AO353_13020	0.34	-1.4
2,884,685	+		AO353_13020	0.42	+2.4
2,884,685	+		AO353_13020	0.42	-1.4
2,884,686	-				+1.1
2,884,686	-		AO353_13020	0.42	+0.5
2,884,692	+		AO353_13020	0.43	+2.3
2,884,736	+		AO353_13020	0.49	+0.5
2,884,736	+		AO353_13020	0.49	+2.3
2,884,736	+		AO353_13020	0.49	+1.9
2,884,736	+		AO353_13020	0.49	-0.2
2,884,736	+		AO353_13020	0.49	-0.2
2,884,737	-		AO353_13020	0.49	+0.7
2,884,737	-		AO353_13020	0.49	-0.8
2,884,737	-		AO353_13020	0.49	+0.2
2,884,737	-		AO353_13020	0.49	-2.1
2,884,737	-		AO353_13020	0.49	+0.2
2,884,780	+		AO353_13020	0.55	+1.7
2,884,780	+		AO353_13020	0.55	+0.5
2,884,780	+		AO353_13020	0.55	-0.9
2,884,780	+		AO353_13020	0.55	+1.6
2,884,780	+		AO353_13020	0.55	-1.4
2,884,780	+		AO353_13020	0.55	-0.1
2,884,780	+		AO353_13020	0.55	+0.9
2,884,780	+		AO353_13020	0.55	+3.4
2,884,781	-		AO353_13020	0.55	-1.5
2,884,781	-		AO353_13020	0.55	-0.5
2,884,781	-		AO353_13020	0.55	+1.0
2,884,781	-		AO353_13020	0.55	-0.1
2,884,781	-		AO353_13020	0.55	+1.7
2,884,781	-		AO353_13020	0.55	-0.9
2,884,781	-		AO353_13020	0.55	+0.5
2,884,781	-		AO353_13020	0.55	-2.2
2,884,781	-		AO353_13020	0.55	-0.4
2,884,796	+		AO353_13020	0.57	+1.1
2,884,796	+		AO353_13020	0.57	+1.5
2,884,796	+		AO353_13020	0.57	+1.1
2,884,796	+		AO353_13020	0.57	+0.9
2,884,796	+		AO353_13020	0.57	+1.6
2,884,797	-		AO353_13020	0.57	+1.3
2,884,841	+		AO353_13020	0.63	+0.3
2,885,026	+		AO353_13020	0.88	-1.1
2,885,026	+		AO353_13020	0.88	+1.1
2,885,026	+		AO353_13020	0.88	+0.1
2,885,026	+		AO353_13020	0.88	+0.1
2,885,026	+		AO353_13020	0.88	+1.4
2,885,027	-		AO353_13020	0.88	-0.9
2,885,027	-		AO353_13020	0.88	-1.7
2,885,085	+				+2.8
2,885,086	-				-0.2
2,885,192	+				+1.1
2,885,193	-				-1.5
2,885,197	+				+1.3
2,885,197	+				+2.2
2,885,197	+				+1.4
2,885,197	+				+0.9
2,885,197	+				-1.2
2,885,197	+				+0.5
2,885,197	+				+1.0
2,885,197	+				+2.9
2,885,197	+				-0.7
2,885,197	+				+1.8
2,885,197	+				+1.9
2,885,198	-				-0.5
2,885,198	-				-1.1
2,885,198	-				+1.1
2,885,198	-				-1.7
2,885,201	+				+1.8
2,885,201	+				+2.6
2,885,201	+				+1.5
2,885,202	-				-1.6
2,885,202	-				+1.1
2,885,202	-				-2.5
2,885,202	-				+2.9
2,885,211	+				+1.1
2,885,211	+				-1.1
2,885,211	+				-0.7
2,885,212	-				-0.5
2,885,212	-				+1.5
2,885,212	-				-1.3
2,885,212	-				-0.3
2,885,212	-				-0.5
2,885,237	+				+1.9
2,885,284	-				-1.4
2,885,327	+				+1.9
2,885,327	+				+2.1
2,885,327	+				+0.3
2,885,327	+				+0.5
2,885,327	+				-1.8
2,885,328	-				-1.1
2,885,328	-				-0.3
2,885,341	+				+3.5
2,885,341	+				+0.7
2,885,341	+				+0.2
2,885,341	+				-0.5
2,885,342	-				+0.1
2,885,342	-				+1.1
2,885,342	-				+1.2
2,885,376	+				-1.8
2,885,376	+				+2.3
2,885,376	+				+2.5
2,885,377	-				-0.7
2,885,386	-				+0.9
2,885,386	-				-1.4
2,885,386	-				+0.9
2,885,414	+		AO353_13025	0.12	+2.1
2,885,414	+		AO353_13025	0.12	+1.5
2,885,415	-		AO353_13025	0.12	-1.6
2,885,522	+		AO353_13025	0.29	+1.8
2,885,548	-		AO353_13025	0.33	+1.1
2,885,548	-		AO353_13025	0.33	-0.3
2,885,574	+		AO353_13025	0.38	+3.4
2,885,574	+		AO353_13025	0.38	+0.3
2,885,574	+		AO353_13025	0.38	+2.0
2,885,574	+		AO353_13025	0.38	+0.8
2,885,574	+		AO353_13025	0.38	+2.3
2,885,574	+		AO353_13025	0.38	+0.4
2,885,575	-		AO353_13025	0.38	+0.4
2,885,590	+		AO353_13025	0.40	+2.3
2,885,591	-		AO353_13025	0.40	+0.7
2,885,688	+		AO353_13025	0.56	+3.3
2,885,688	+		AO353_13025	0.56	+2.8
2,885,688	+		AO353_13025	0.56	-0.5
2,885,688	+		AO353_13025	0.56	+1.8
2,885,688	+		AO353_13025	0.56	+1.7
2,885,689	-		AO353_13025	0.56	+0.1
2,885,689	-		AO353_13025	0.56	+0.5
2,885,689	-		AO353_13025	0.56	-0.5
2,885,717	+		AO353_13025	0.61	+0.6
2,885,717	+		AO353_13025	0.61	+1.9
2,885,717	+		AO353_13025	0.61	-0.1
2,885,717	+		AO353_13025	0.61	+2.1
2,885,718	-		AO353_13025	0.61	+3.1
2,885,718	-		AO353_13025	0.61	-1.6
2,885,747	+		AO353_13025	0.66	+0.3
2,885,747	+		AO353_13025	0.66	+1.1
2,885,747	+		AO353_13025	0.66	+1.9
2,885,747	+		AO353_13025	0.66	-0.7
2,885,747	+		AO353_13025	0.66	+1.9
2,885,748	-		AO353_13025	0.66	-1.1
2,885,748	-		AO353_13025	0.66	-1.1
2,885,759	+		AO353_13025	0.67	+2.1
2,885,759	+		AO353_13025	0.67	+3.5
2,885,759	+		AO353_13025	0.67	-0.1
2,885,760	-		AO353_13025	0.68	-0.2
2,885,760	-		AO353_13025	0.68	+0.1
2,885,760	-		AO353_13025	0.68	-1.5
2,885,760	-				+2.1
2,885,760	-		AO353_13025	0.68	-0.9
2,885,760	-		AO353_13025	0.68	-0.7
2,885,824	+		AO353_13025	0.78	+2.6
2,885,824	+		AO353_13025	0.78	-1.0
2,885,825	-		AO353_13025	0.78	+0.3
2,885,825	-		AO353_13025	0.78	-0.5
2,885,825	-		AO353_13025	0.78	+0.1
2,885,868	+		AO353_13025	0.85	-1.8
2,885,868	+		AO353_13025	0.85	+2.0
2,885,869	-		AO353_13025	0.85	-1.4
2,885,869	-		AO353_13025	0.85	-0.5
2,885,902	+				+2.1
2,885,902	+				-0.2
2,885,903	-				+0.2
2,885,903	-				-0.7
2,885,950	-				-0.0
2,885,950	-				-1.1
2,885,958	-				+1.3
2,885,958	-				+1.3
2,885,958	-				-0.3
2,886,022	+		AO353_13030	0.16	-0.3
2,886,022	+		AO353_13030	0.16	+0.5
2,886,022	+		AO353_13030	0.16	+1.1
2,886,023	-		AO353_13030	0.16	-0.1
2,886,023	-		AO353_13030	0.16	+1.5
2,886,023	-		AO353_13030	0.16	-0.9
2,886,023	-		AO353_13030	0.16	+0.5
2,886,145	+		AO353_13030	0.43	+1.6
2,886,145	+		AO353_13030	0.43	+0.5
2,886,220	+		AO353_13030	0.60	+0.5
2,886,220	+		AO353_13030	0.60	-1.3
2,886,220	+		AO353_13030	0.60	-0.1
2,886,220	+		AO353_13030	0.60	+0.0
2,886,220	+		AO353_13030	0.60	-0.9
2,886,221	-		AO353_13030	0.60	-0.3
2,886,283	+		AO353_13030	0.74	-1.7
2,886,283	+		AO353_13030	0.74	-0.9
2,886,283	+		AO353_13030	0.74	+0.4
2,886,283	+		AO353_13030	0.74	+0.8
2,886,283	+				+2.1
2,886,283	+		AO353_13030	0.74	+4.1
2,886,283	+		AO353_13030	0.74	-0.5
2,886,283	+		AO353_13030	0.74	-0.3
2,886,283	+		AO353_13030	0.74	+0.5
2,886,283	+		AO353_13030	0.74	+0.7
2,886,283	+		AO353_13030	0.74	+0.6
2,886,284	-		AO353_13030	0.74	-1.3
2,886,284	-		AO353_13030	0.74	+1.1
2,886,284	-		AO353_13030	0.74	+1.1
2,886,284	-		AO353_13030	0.74	+0.6
2,886,284	-		AO353_13030	0.74	+3.1
2,886,284	-		AO353_13030	0.74	+3.6
2,886,284	-		AO353_13030	0.74	-0.5
2,886,284	-		AO353_13030	0.74	-0.9
2,886,284	-		AO353_13030	0.74	+1.7
2,886,395	+				+1.5
2,886,395	+				+2.1
2,886,395	+				-1.8
2,886,395	+				+1.6
2,886,395	+				+1.5
2,886,395	+				+0.5
2,886,396	-				-0.5
2,886,396	-				-1.9
2,886,396	-				+0.6
2,886,396	-				-0.7
2,886,400	+				-2.0
2,886,400	+				+1.1
2,886,400	+				+2.1
2,886,400	+				+0.3
2,886,400	+				+0.8
2,886,401	-				-0.7
2,886,401	-				-0.3
2,886,401	-				-1.1
2,886,401	-				-0.5
2,886,401	-				-1.1
2,886,401	-				-1.3
2,886,401	-				-0.4
2,886,401	-				-0.7
2,886,401	-				+0.5
2,886,454	+				-1.8
2,886,454	+				-0.5
2,886,454	+				-0.9
2,886,454	+				-0.6
2,886,454	+				-2.6
2,886,454	+				-0.7
2,886,454	+				-0.9
2,886,454	+				+0.1
2,886,454	+				-1.3
2,886,454	+				-1.8
2,886,454	+				+0.8
2,886,454	+				+0.1
2,886,454	+				+0.1
2,886,454	+				-0.1
2,886,455	-				-0.6
2,886,455	-				-1.4
2,886,455	-				+0.1
2,886,455	-				-1.4
2,886,455	-				+0.1
2,886,455	-				-0.6
2,886,455	-				-1.3
2,886,455	-				+0.3
2,886,466	+				+0.1
2,886,539	+				+3.3