Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08660

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_08650 and AO353_08655 overlap by 4 nucleotidesAO353_08655 and AO353_08660 are separated by 8 nucleotidesAO353_08660 and AO353_08665 are separated by 25 nucleotides AO353_08650: AO353_08650 - aliphatic sulfonate ABC transporter ATP-binding protein, at 1,900,299 to 1,901,105 _08650 AO353_08655: AO353_08655 - alkanesulfonate transporter permease subunit, at 1,901,102 to 1,901,890 _08655 AO353_08660: AO353_08660 - alkanesulfonate monooxygenase, at 1,901,899 to 1,903,047 _08660 AO353_08665: AO353_08665 - ABC transporter substrate-binding protein, at 1,903,073 to 1,904,041 _08665 Position (kb) 1901 1902 1903 1904Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1900.943 kb on + strand, within AO353_08650at 1900.943 kb on + strand, within AO353_08650at 1900.943 kb on + strand, within AO353_08650at 1900.944 kb on - strand, within AO353_08650at 1900.944 kb on - strand, within AO353_08650at 1900.944 kb on - strand, within AO353_08650at 1900.944 kb on - strand, within AO353_08650at 1900.950 kb on - strand, within AO353_08650at 1901.120 kb on - strandat 1901.130 kb on + strandat 1901.205 kb on + strand, within AO353_08655at 1901.415 kb on + strand, within AO353_08655at 1901.415 kb on + strand, within AO353_08655at 1901.415 kb on + strand, within AO353_08655at 1901.415 kb on + strand, within AO353_08655at 1901.415 kb on + strand, within AO353_08655at 1901.416 kb on - strand, within AO353_08655at 1901.419 kb on + strand, within AO353_08655at 1901.419 kb on + strand, within AO353_08655at 1901.419 kb on + strand, within AO353_08655at 1901.419 kb on + strand, within AO353_08655at 1901.419 kb on + strand, within AO353_08655at 1901.419 kb on + strand, within AO353_08655at 1901.420 kb on - strand, within AO353_08655at 1901.420 kb on - strand, within AO353_08655at 1901.420 kb on - strand, within AO353_08655at 1901.420 kb on - strand, within AO353_08655at 1901.420 kb on - strand, within AO353_08655at 1901.420 kb on - strand, within AO353_08655at 1901.420 kb on - strand, within AO353_08655at 1901.466 kb on + strand, within AO353_08655at 1901.466 kb on + strand, within AO353_08655at 1901.466 kb on + strand, within AO353_08655at 1901.466 kb on + strand, within AO353_08655at 1901.466 kb on + strand, within AO353_08655at 1901.466 kb on + strand, within AO353_08655at 1901.466 kb on + strand, within AO353_08655at 1901.466 kb on + strand, within AO353_08655at 1901.466 kb on + strand, within AO353_08655at 1901.467 kb on - strand, within AO353_08655at 1901.467 kb on - strand, within AO353_08655at 1901.467 kb on - strand, within AO353_08655at 1901.467 kb on - strand, within AO353_08655at 1901.467 kb on - strand, within AO353_08655at 1901.467 kb on - strand, within AO353_08655at 1901.467 kb on - strand, within AO353_08655at 1901.467 kb on - strand, within AO353_08655at 1901.478 kb on + strand, within AO353_08655at 1901.478 kb on + strand, within AO353_08655at 1901.478 kb on + strand, within AO353_08655at 1901.478 kb on + strand, within AO353_08655at 1901.479 kb on - strand, within AO353_08655at 1901.479 kb on - strand, within AO353_08655at 1901.834 kb on + strandat 1901.873 kb on - strandat 1901.964 kb on - strandat 1901.964 kb on - strandat 1902.066 kb on + strand, within AO353_08660at 1902.066 kb on + strand, within AO353_08660at 1902.067 kb on - strand, within AO353_08660at 1902.072 kb on + strand, within AO353_08660at 1902.072 kb on + strand, within AO353_08660at 1902.072 kb on + strand, within AO353_08660at 1902.072 kb on + strand, within AO353_08660at 1902.092 kb on + strand, within AO353_08660at 1902.092 kb on + strand, within AO353_08660at 1902.092 kb on + strand, within AO353_08660at 1902.093 kb on - strand, within AO353_08660at 1902.093 kb on - strand, within AO353_08660at 1902.093 kb on - strand, within AO353_08660at 1902.415 kb on + strand, within AO353_08660at 1902.415 kb on + strand, within AO353_08660at 1902.415 kb on + strand, within AO353_08660at 1902.415 kb on + strand, within AO353_08660at 1902.524 kb on + strand, within AO353_08660at 1902.524 kb on + strand, within AO353_08660at 1902.525 kb on - strand, within AO353_08660at 1902.525 kb on - strand, within AO353_08660at 1902.525 kb on - strand, within AO353_08660at 1902.525 kb on - strand, within AO353_08660at 1902.901 kb on + strand, within AO353_08660at 1902.901 kb on + strand, within AO353_08660at 1902.901 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.903 kb on + strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.904 kb on - strand, within AO353_08660at 1902.908 kb on - strand, within AO353_08660at 1902.908 kb on - strand, within AO353_08660at 1902.908 kb on - strand, within AO353_08660at 1902.908 kb on - strand, within AO353_08660at 1902.956 kb on + strandat 1902.956 kb on + strandat 1902.956 kb on + strandat 1902.956 kb on + strandat 1902.957 kb on - strandat 1902.957 kb on - strandat 1902.957 kb on - strandat 1902.998 kb on + strandat 1902.998 kb on + strandat 1902.998 kb on + strandat 1902.999 kb on - strandat 1902.999 kb on - strandat 1902.999 kb on - strandat 1903.035 kb on + strandat 1903.035 kb on + strandat 1903.035 kb on + strandat 1903.035 kb on + strandat 1903.035 kb on + strandat 1903.035 kb on + strandat 1903.035 kb on + strandat 1903.035 kb on + strandat 1903.036 kb on - strandat 1903.036 kb on - strandat 1903.036 kb on - strandat 1903.038 kb on + strandat 1903.039 kb on - strandat 1903.074 kb on + strandat 1903.074 kb on + strandat 1903.075 kb on - strandat 1903.155 kb on + strandat 1903.155 kb on + strandat 1903.155 kb on + strandat 1903.155 kb on + strandat 1903.156 kb on - strandat 1903.156 kb on - strandat 1903.377 kb on + strand, within AO353_08665at 1903.378 kb on - strand, within AO353_08665at 1903.395 kb on + strand, within AO353_08665at 1903.396 kb on - strand, within AO353_08665at 1903.396 kb on - strand, within AO353_08665at 1903.396 kb on - strand, within AO353_08665at 1903.396 kb on - strand, within AO353_08665at 1903.473 kb on + strand, within AO353_08665at 1903.474 kb on - strand, within AO353_08665at 1903.548 kb on - strand, within AO353_08665at 1903.548 kb on - strand, within AO353_08665at 1903.566 kb on + strand, within AO353_08665at 1903.566 kb on + strand, within AO353_08665at 1903.566 kb on + strand, within AO353_08665at 1903.566 kb on + strand, within AO353_08665at 1903.566 kb on + strand, within AO353_08665at 1903.566 kb on + strand, within AO353_08665at 1903.567 kb on - strand, within AO353_08665at 1903.596 kb on - strand, within AO353_08665at 1903.605 kb on + strand, within AO353_08665at 1903.605 kb on + strand, within AO353_08665at 1903.605 kb on + strand, within AO353_08665at 1903.605 kb on + strand, within AO353_08665at 1903.605 kb on + strand, within AO353_08665at 1903.605 kb on + strand, within AO353_08665at 1903.606 kb on - strand, within AO353_08665at 1903.606 kb on - strand, within AO353_08665at 1903.606 kb on - strand, within AO353_08665at 1903.606 kb on - strand, within AO353_08665at 1903.642 kb on + strand, within AO353_08665at 1903.722 kb on + strand, within AO353_08665at 1903.723 kb on - strand, within AO353_08665at 1903.723 kb on - strand, within AO353_08665at 1903.723 kb on - strand, within AO353_08665at 1903.723 kb on - strand, within AO353_08665at 1903.731 kb on + strand, within AO353_08665at 1903.731 kb on + strand, within AO353_08665at 1903.731 kb on + strand, within AO353_08665at 1903.732 kb on - strand, within AO353_08665at 1903.926 kb on + strand, within AO353_08665at 1903.926 kb on + strand, within AO353_08665at 1904.042 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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1,900,943 + AO353_08650 0.80 +2.0
1,900,943 + AO353_08650 0.80 +0.1
1,900,943 + AO353_08650 0.80 +2.0
1,900,944 - AO353_08650 0.80 -0.6
1,900,944 - AO353_08650 0.80 -0.9
1,900,944 - AO353_08650 0.80 +0.1
1,900,944 - AO353_08650 0.80 -1.9
1,900,950 - AO353_08650 0.81 -1.5
1,901,120 - +0.1
1,901,130 + +0.1
1,901,205 + AO353_08655 0.13 -2.5
1,901,415 + AO353_08655 0.40 +1.0
1,901,415 + AO353_08655 0.40 +2.7
1,901,415 + AO353_08655 0.40 -1.3
1,901,415 + AO353_08655 0.40 -0.5
1,901,415 + AO353_08655 0.40 +0.9
1,901,416 - AO353_08655 0.40 +1.7
1,901,419 + AO353_08655 0.40 +1.1
1,901,419 + AO353_08655 0.40 -0.6
1,901,419 + AO353_08655 0.40 +0.7
1,901,419 + AO353_08655 0.40 +1.1
1,901,419 + AO353_08655 0.40 -1.0
1,901,419 + AO353_08655 0.40 -1.5
1,901,420 - AO353_08655 0.40 +2.0
1,901,420 - AO353_08655 0.40 -1.6
1,901,420 - AO353_08655 0.40 -0.1
1,901,420 - AO353_08655 0.40 -0.8
1,901,420 - AO353_08655 0.40 -0.4
1,901,420 - AO353_08655 0.40 -0.0
1,901,420 - AO353_08655 0.40 -0.4
1,901,466 + AO353_08655 0.46 +0.1
1,901,466 + AO353_08655 0.46 -0.6
1,901,466 + AO353_08655 0.46 -2.0
1,901,466 + AO353_08655 0.46 -0.5
1,901,466 + AO353_08655 0.46 +1.2
1,901,466 + AO353_08655 0.46 -0.6
1,901,466 + AO353_08655 0.46 -0.9
1,901,466 + AO353_08655 0.46 -0.3
1,901,466 + AO353_08655 0.46 -0.4
1,901,467 - AO353_08655 0.46 -0.2
1,901,467 - AO353_08655 0.46 -0.2
1,901,467 - AO353_08655 0.46 -1.8
1,901,467 - AO353_08655 0.46 -0.3
1,901,467 - AO353_08655 0.46 -0.1
1,901,467 - AO353_08655 0.46 +1.3
1,901,467 - AO353_08655 0.46 +0.0
1,901,467 - AO353_08655 0.46 +1.7
1,901,478 + AO353_08655 0.48 +0.7
1,901,478 + AO353_08655 0.48 +0.2
1,901,478 + AO353_08655 0.48 +0.7
1,901,478 + AO353_08655 0.48 +2.1
1,901,479 - AO353_08655 0.48 -0.3
1,901,479 - AO353_08655 0.48 -0.6
1,901,834 + -1.5
1,901,873 - -0.3
1,901,964 - -1.5
1,901,964 - -0.1
1,902,066 + AO353_08660 0.15 -0.6
1,902,066 + AO353_08660 0.15 -0.8
1,902,067 - AO353_08660 0.15 +2.4
1,902,072 + AO353_08660 0.15 -1.3
1,902,072 + AO353_08660 0.15 -1.1
1,902,072 + AO353_08660 0.15 -1.8
1,902,072 + AO353_08660 0.15 -2.4
1,902,092 + AO353_08660 0.17 -0.3
1,902,092 + AO353_08660 0.17 -1.9
1,902,092 + AO353_08660 0.17 +1.4
1,902,093 - AO353_08660 0.17 -1.3
1,902,093 - AO353_08660 0.17 -1.8
1,902,093 - AO353_08660 0.17 +0.7
1,902,415 + AO353_08660 0.45 -1.5
1,902,415 + AO353_08660 0.45 +0.7
1,902,415 + AO353_08660 0.45 -0.3
1,902,415 + AO353_08660 0.45 -0.5
1,902,524 + AO353_08660 0.54 -2.0
1,902,524 + AO353_08660 0.54 -1.5
1,902,525 - AO353_08660 0.54 -0.3
1,902,525 - AO353_08660 0.54 -0.6
1,902,525 - AO353_08660 0.54 -1.8
1,902,525 - AO353_08660 0.54 -0.2
1,902,901 + AO353_08660 0.87 -1.3
1,902,901 + AO353_08660 0.87 +0.3
1,902,901 + AO353_08660 0.87 -2.9
1,902,903 + AO353_08660 0.87 -0.6
1,902,903 + AO353_08660 0.87 +1.1
1,902,903 + AO353_08660 0.87 -0.6
1,902,903 + AO353_08660 0.87 +0.1
1,902,903 + AO353_08660 0.87 -1.1
1,902,903 + AO353_08660 0.87 -0.1
1,902,903 + AO353_08660 0.87 -1.8
1,902,903 + AO353_08660 0.87 -0.3
1,902,903 + AO353_08660 0.87 +0.5
1,902,903 + AO353_08660 0.87 +1.0
1,902,903 + AO353_08660 0.87 -0.3
1,902,903 + AO353_08660 0.87 -0.5
1,902,903 + AO353_08660 0.87 -1.2
1,902,903 + AO353_08660 0.87 +0.7
1,902,903 + AO353_08660 0.87 -0.3
1,902,903 + AO353_08660 0.87 -0.2
1,902,903 + AO353_08660 0.87 -1.5
1,902,903 + AO353_08660 0.87 +2.7
1,902,903 + AO353_08660 0.87 -2.8
1,902,903 + AO353_08660 0.87 -2.0
1,902,903 + AO353_08660 0.87 -0.5
1,902,903 + AO353_08660 0.87 -0.9
1,902,903 + AO353_08660 0.87 +2.9
1,902,903 + AO353_08660 0.87 -0.9
1,902,903 + AO353_08660 0.87 +0.2
1,902,903 + AO353_08660 0.87 -1.9
1,902,903 + AO353_08660 0.87 -0.6
1,902,903 + AO353_08660 0.87 +0.5
1,902,903 + AO353_08660 0.87 -1.6
1,902,904 - AO353_08660 0.87 +1.2
1,902,904 - AO353_08660 0.87 -0.6
1,902,904 - AO353_08660 0.87 +0.7
1,902,904 - AO353_08660 0.87 -2.0
1,902,904 - AO353_08660 0.87 +0.3
1,902,904 - AO353_08660 0.87 -1.2
1,902,904 - AO353_08660 0.87 -2.6
1,902,904 - AO353_08660 0.87 -1.3
1,902,904 - AO353_08660 0.87 +0.4
1,902,904 - AO353_08660 0.87 +1.7
1,902,904 - AO353_08660 0.87 -0.6
1,902,904 - AO353_08660 0.87 -0.8
1,902,904 - AO353_08660 0.87 -0.3
1,902,904 - AO353_08660 0.87 +0.4
1,902,904 - AO353_08660 0.87 -0.3
1,902,904 - AO353_08660 0.87 +1.0
1,902,904 - AO353_08660 0.87 -0.4
1,902,904 - AO353_08660 0.87 +0.3
1,902,904 - AO353_08660 0.87 -1.5
1,902,904 - AO353_08660 0.87 -0.9
1,902,904 - AO353_08660 0.87 +1.2
1,902,904 - AO353_08660 0.87 -0.3
1,902,904 - AO353_08660 0.87 +2.6
1,902,904 - AO353_08660 0.87 +0.4
1,902,904 - AO353_08660 0.87 -1.6
1,902,904 - AO353_08660 0.87 -1.3
1,902,908 - AO353_08660 0.88 +1.0
1,902,908 - AO353_08660 0.88 +0.1
1,902,908 - AO353_08660 0.88 +0.7
1,902,908 - AO353_08660 0.88 +1.3
1,902,956 + -0.4
1,902,956 + -0.3
1,902,956 + -1.9
1,902,956 + -0.6
1,902,957 - -1.6
1,902,957 - +0.4
1,902,957 - +2.7
1,902,998 + +1.5
1,902,998 + +1.0
1,902,998 + -2.3
1,902,999 - +0.7
1,902,999 - +0.3
1,902,999 - -1.6
1,903,035 + +0.3
1,903,035 + +0.4
1,903,035 + -1.5
1,903,035 + -0.1
1,903,035 + -0.6
1,903,035 + +0.1
1,903,035 + +0.1
1,903,035 + -2.3
1,903,036 - -0.5
1,903,036 - +0.3
1,903,036 - +0.1
1,903,038 + +1.5
1,903,039 - +0.8
1,903,074 + -1.6
1,903,074 + +0.7
1,903,075 - +0.4
1,903,155 + -2.5
1,903,155 + -1.1
1,903,155 + -0.5
1,903,155 + -0.4
1,903,156 - -0.3
1,903,156 - +1.7
1,903,377 + AO353_08665 0.31 +1.9
1,903,378 - AO353_08665 0.31 -1.8
1,903,395 + AO353_08665 0.33 -0.3
1,903,396 - AO353_08665 0.33 -0.0
1,903,396 - AO353_08665 0.33 -0.0
1,903,396 - AO353_08665 0.33 +0.6
1,903,396 - AO353_08665 0.33 -1.6
1,903,473 + AO353_08665 0.41 -0.8
1,903,474 - AO353_08665 0.41 -1.5
1,903,548 - AO353_08665 0.49 -3.3
1,903,548 - AO353_08665 0.49 -0.9
1,903,566 + AO353_08665 0.51 -0.6
1,903,566 + AO353_08665 0.51 -0.4
1,903,566 + AO353_08665 0.51 -0.6
1,903,566 + AO353_08665 0.51 -1.3
1,903,566 + AO353_08665 0.51 +0.7
1,903,566 + AO353_08665 0.51 +1.4
1,903,567 - AO353_08665 0.51 -0.2
1,903,596 - AO353_08665 0.54 +0.7
1,903,605 + AO353_08665 0.55 -0.9
1,903,605 + AO353_08665 0.55 +0.0
1,903,605 + AO353_08665 0.55 +0.6
1,903,605 + AO353_08665 0.55 +0.4
1,903,605 + AO353_08665 0.55 -2.6
1,903,605 + AO353_08665 0.55 +0.7
1,903,606 - AO353_08665 0.55 -1.1
1,903,606 - AO353_08665 0.55 +1.3
1,903,606 - AO353_08665 0.55 -0.6
1,903,606 - AO353_08665 0.55 +0.5
1,903,642 + AO353_08665 0.59 -0.2
1,903,722 + AO353_08665 0.67 -0.3
1,903,723 - AO353_08665 0.67 -0.7
1,903,723 - AO353_08665 0.67 -1.3
1,903,723 - AO353_08665 0.67 +0.5
1,903,723 - AO353_08665 0.67 -1.1
1,903,731 + AO353_08665 0.68 -0.0
1,903,731 + AO353_08665 0.68 -0.3
1,903,731 + AO353_08665 0.68 +0.7
1,903,732 - AO353_08665 0.68 -1.4
1,903,926 + AO353_08665 0.88 -0.8
1,903,926 + AO353_08665 0.88 +1.1
1,904,042 - +0.8

Or see this region's nucleotide sequence